Echinops telfairi (small Madagascar hedgehog): 101643558
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Entry
101643558 CDS
T08707
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03008
Ribosome biogenesis in eukaryotes
etf05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101643558 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
101643558 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101643558 (DROSHA)
03009 Ribosome biogenesis [BR:
etf03009
]
101643558 (DROSHA)
03036 Chromosome and associated proteins [BR:
etf03036
]
101643558 (DROSHA)
Enzymes [BR:
etf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
101643558 (DROSHA)
Messenger RNA biogenesis [BR:
etf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
101643558 (DROSHA)
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
90S particles
RNase
101643558 (DROSHA)
Prokaryotic type
rRNA processing factors
101643558 (DROSHA)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
101643558 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
101643558
NCBI-ProteinID:
XP_045141205
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MQGNTCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPAQYQYEPPSAPST
TFSNSAAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPVRPPFPNHQMRHPFPVPPCFPPMP
PPVPCPNNPPAPGAPPGQNSYPFLMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPS
FSSFQNNTSSFPTSANNGSSPHFRHLPPYPLAKAPSERRSPERLKHYEDHRHRDHSHGRG
ERHRSLDRRERGRSPDRRRQDSRYRADHDRGRTPSRHRSYERSRERERERHRHRDSRRSP
SLERPFKKENKRPGRSYGLPVVPDPGCTPELPGEITKNTDSWAPAPETVDHRSPSKEKKR
TRWEDEKERWSDNPSSGKEKLYPSLKEKEPEETLPDKNEEEEEELLKPVWIRCTHSENYY
SSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESSSE
SECESDAESTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQAIKPCRPMTNNAG
RLSHYRITVSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTI
HFIEEMMPEYFSIVFMFSSPDLISWQQEALPLVSENLPLSWYGGKEVLSMHQILLYLLRC
SKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPGTKPNSVRIDQLDREQFNPDVITF
PIIVHFGIRPAQLSYAGDPHWEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAM
MLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCG
IRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTS
VHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMA
NCFEALIGAVYLEGSLEEAKQLFGRLLFNDQDLREVWLNYPLHPLQLQEPNTDRQLVETS
PVLQKLTEFEDAIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEY
LFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLL
ESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDI
PLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQK
RFIERKYRQELKEMRWEREHQEREPDEAEDVKK
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcaatacatgccataggatgtccttccacccaggaagaggatgtccccgaggg
cgaggaggacatggagccagaccctcggcaccagccttccgcccccagaatctgaggctg
ctccaccctcaacagccgcccgcgcaatatcaatatgaaccgcccagtgccccctccacc
accttctcaaactctgcggcccccaacttcctgcccccgcgcccagacttcgtacccttc
cccccgcccatgcctccgtcagcacagggccctctgcccccctgcccagtcaggcccccc
ttcccaaaccaccagatgcggcacccgttcccggtgcccccctgcttcccccccatgcct
ccccctgtgccctgtcccaacaatcccccggcccctggagcccctccggggcaaaactct
tacccctttctgatgccccctccttccatgcctcacccaccaccccctccggtcatgccc
cagcaggtcaactaccagtaccccccaggatactcccaccacaacttcccgcctcccagt
ttcagcagcttccagaacaacaccagctccttccccaccagcgccaacaacggcagcagc
ccacatttcagacacctccctccgtacccgctggccaaggcccccagcgagagaaggtcc
ccagagcggctgaagcactatgaggaccacaggcaccgcgatcacagccacgggcgaggc
gagaggcaccggtccctggatcggcgggagcgaggccgcagcccggatcggaggaggcag
gacagccgctaccgcgctgaccatgaccgggggaggacgccctctcgccaccgcagctac
gagcggagccgggagcgggagcgggagagacaccggcaccgggatagccgaaggtcgccg
tctttggaaagacccttcaagaaagagaacaagcgacctggaaggagttatggtttgcca
gttgttcccgaccctggatgcacaccagaattacctggggagattactaaaaatacagat
tcttgggccccagccccggagactgtggatcatcgctccccaagtaaggagaagaagagg
actcgttgggaagacgaaaaagagagatggagtgacaaccctagctctggcaaagagaag
ctgtatccctccctcaaggagaaggagccggaggagacgctgcctgacaaaaatgaggag
gaggaggaggaactgcttaaaccggtgtggattcgctgcacccactcagaaaactactac
tcgagtgaccccatggatcaggtgggagactccactgttgttggaactagtaggctgcgg
gacttatatgacaaatttgaggaggagttggggagcaggcaagaaaaagccaaagctgcc
cgaccaccctgggagcctcccaagacgaagctagatgaagatttagagagctccagtgag
tccgagtgtgagtccgacgcggagagcacctgctccagcagctccgactcggaagtgttt
gacgtcatcgcagaaatcaagcgtaaaaaggcccatcccgaccgactccacgatgagctc
tggtacaacgaccccggccaggccatcaaaccctgtcgtcctatgaccaacaatgctggc
cggctttcccactatcggatcacagtctccccacccacaaacttcctgaccgaccggcca
accgtcatagaatacgatgaccacgagtatatcttcgaagggttttccatgtttgcacat
gctcccctgaccaatatcccactgtgtaaagtgattcgattcaacatagactacacgatt
catttcattgaagagatgatgcccgagtacttcagcattgtgttcatgttttcctcacca
gatctcatctcctggcagcaggaggccttgcccctcgtgtccgagaacctgcctttgagc
tggtacggaggcaaggaggtgctgtccatgcaccagatcctcctctacctgctgcgctgc
agcaaagccctggtgcccgaggaggagatcgccaacatgcttcagtgggaggagctggag
tggcagaagtacgcggaggaatgcaaaggcatgatcgtcaccaaccccggcacgaaacca
aattctgtccgcatcgatcaactggatcgtgaacagttcaaccccgacgtgattactttt
ccaattatcgtccactttgggatacgccctgcacagttgagttatgcaggagatccacac
tgggaagccctccaaaaaatccgacagaagaatacaatgaggcgagaagtcactgtggag
ctgagtagccaagggttctggaaaactggcatccgctcggacgtctgtcagcatgcaatg
atgttgccagttctgacccatcatatccggtaccatcagtgcctgatgcacctggataaa
ctgataggatatactttccaggatcgttgtctgttacagctggccatgacccatccgagt
catcacttaaatttcgggatgaatcctgatcatgccaggaattcgttgtctaactgtggg
atccggcagcccaaatacggagacagaaaagttcatcacatgcacatgcggaaaaaagga
ataaacaccttaataaatattatgtcacgccttggccaagatgacccaactccttcaagg
attaaccacaacgagcgcttggagttcctgggagatgctgtggttgagtttctgaccagc
gtccacctgtactatttgttccctagtctggaggaaggaggcttagcgacctatcggact
gccatcgtgcagaatcaacacctggccatgctcgcgaagaaacttgagctggaccgattt
atgctctatgctcacggacctgacctgtgcagagagtcagaccttcggcacgcaatggct
aattgttttgaagcgttgataggagctgtgtacctggagggaagcctggaggaagccaag
cagttgtttggacgtctgctctttaatgatcaggacctgcgagaagtctggctcaattat
cctctccacccactccaactgcaagagccgaacactgaccgacagcttgtcgagacgtct
cccgttctgcagaagcttactgagtttgaagatgctattggggtcctcttcacccatgtg
agacttctggcccgagcctttaccttgagaactgtgggatttaaccatctgaccctgggc
cacaatcagaggatggaatttctgggtgactccataatgcagctggtggctacagagtac
ttgttcattcacttcccagaccatcacgaagggcacttaactttgctgcggagctctctg
gtgaacaaccggacccaagccaaggtggccgaggagctcggcatgcaggagtacgccata
accaacgacaagaccaagaggcccgtggccctcaggaccaagaccttggccgaccttttg
gaatcattcattgccgcactctacattgataaggatttggagtatgttcacaccttcatg
aacgtctgcttcttcccacggttaaaagagttcattttgaatcaggactggaacgacccc
aaatcccagcttcagcagtgttgcctgacacttaggacggaaggaaaggagccagacatc
cctctgtacaagaccctgcagaccgtggggccatcccatgcccggacctacacggtggcc
gtttacttcaagggagaaagaataggctgcgggaaaggaccgagcattcagcaagcagaa
atgggagccgcgatggatgcacttgaaaaatataactttccccagatggctcatcagaag
cggttcattgaacggaagtacagacaagagctaaaggaaatgcggtgggaaagagaacat
caagagagggaaccggatgaggccgaggacgtcaagaaatga
DBGET
integrated database retrieval system
