Echinops telfairi (small Madagascar hedgehog): 101643559
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Entry
101643559 CDS
T08707
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
etf03037
]
101643559 (IFT88)
Cilium and associated proteins [BR:
etf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
101643559 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
TPR_14
TPR_16
ANAPC3
TPR_11
TPR_10
TPR_17
TPR_CcmH_CycH
ARM_TT21_4th
ARM_TT21_5th
TPR-S
TPR_21
TPR_15
ARM_TT21_N
ARM_TT21_C
HEAT_Nup120
DUF6584
ARM_TT21_2nd
HAT_PRP39_C
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
101643559
NCBI-ProteinID:
XP_004714886
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDTAFQQAVRTSHGRRPPITAKVPSTA
VTRPIATGYGSKTSLASSLGRPMTGAIQDGVTRPMTAVRAAGYTKAALRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCVANSCGDLKLALEKAKDAGRKERVLVR
QREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNTGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVYKEMRIKIMQNIGVTFIKTGQYSDAVNSLEHIMS
MAPNLKAGFNLILSYFAVGDREKMKKAFQKLIAVPLEVDEDDKYISPSDDPHTNLVIEAI
KNDNLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEMVKASQYVELANDLEI
NKAITYLRQKDFNQAVQTLKIFEKKDSRVKSAAATNLSFLYYLENEFAQASTYADLAVIS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
CFLKLHAILRNSAQILYQIANVYELMEDPNQAIEWLMQLISVVPTDSRVLSKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLIRLCTDIGLKEVQEYATKLKRLEKM
KEIREQRIKSGRDGSGGIRSKREGSAGSESGQNCSASSKGDRLNAKLRALPGTNEPYESS
SNKEIDVSYVDPLGPQIERPKTAAKKRMEEDDFADEELGEDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcacctggctccagaaacagatgaagacgacctctattcgggttac
aacgactacaatccaacctacgataccgaggatttagagaatgatacagcgttccagcaa
gctgtgagaactagccatggcagaagacctccaataactgctaaagtaccaagcactgca
gttactagacctatagctactggatatgggtccaagacatccctggcatcatcgctggga
aggccaatgacgggagctattcaggatggcgtcactagacctatgacagcggtgagagca
gctggctacaccaaagcagctttgagaggctctgcctttgaccccctgggccaatccagg
ggccctgcaccgcctttggaagccaaaaacgaagacagtcctgaagaaaagattagacaa
ttagagaaaaaagtaaatgagttggtagaagaaagctgtgttgccaacagttgtggagac
ttaaaactggccctcgaaaaggcaaaagatgctgggaggaaagagagagtcctagtaaga
caacgagaacaagtcacaactccagaaaatatcaacttagacttgacttactcggttctt
ttcaacctggccagtcagtactcagccaatgagatgtatgccgaagccctgaacacgtac
caagtgatcgtgaagaacaagatgttcagcaacacaggaagactgaaggtgaatatggga
aatatttatttaaagcagagaaattattccaaagccattaaattctaccggatggcatta
gatcagattccaagtgtctataaagaaatgaggattaaaataatgcagaacattggcgtg
acgtttattaagactggccagtactcggatgcagttaattcattagagcacataatgagc
atggcgccgaatctgaaggctggcttcaacttgatcctcagttattttgcggttggggac
cgcgagaaaatgaagaaggctttccaaaagttgatcgcagttccattagaagttgatgaa
gacgataaatatatttcaccaagtgatgatcctcatactaacctagtgattgaagctata
aaaaatgataatctaaggcaaatggaacgtgaaaggaaagcaatggcagaaaaatacatc
atgacagcggccaaactcatcgctccagtcattgaaacctcttttgctgtgggttacgac
tggtgtgttgaaatggtgaaagcttcgcagtatgtcgagctagcaaacgacctggaaata
aataaagcgatcacatacttgagacagaaagactttaaccaagctgtgcagaccttaaaa
atatttgaaaagaaggacagtagagtgaaaagtgcagctgcaaccaacctttcgttcctg
tattatttagaaaatgagtttgcacaagccagcacctatgcagacttagccgtgatctcc
gacagatacaacccatccgctcttacaaataaagggaacaccgtgtttgcgaatggcgac
tatgagaaggcagctgaattctacaaggaggctctgagaaacgactcttcgtgcaccgaa
gcactgtataatatcggccttacctacaagaagctgaaccggttagatgaagctttggat
tgcttcctgaagctgcacgccatcctgcggaacagtgcccaaattctctaccagatagca
aatgtatacgaattaatggaggatccaaatcaagctattgagtggctgatgcagctgatc
agtgttgttccgactgattcgagagttttgtctaaattaggagaattgtatgatagtgaa
ggagataagtcccaagcttttcaatattactatgagtcctacaggtattttccttctaac
atcgaggtcattgagtggcttggggcctattacattgacacccaattttgtgaaaaagcc
attcagtactttgaaagagcatctcttatacagcctacacaggtgaaatggcagctgatg
gtagcgagctgttttcgaagaagtggtaactaccaaaaagcattagacacttataaggat
attcacagaaaatttccagaaaatgttgaatgcttgcgtttcttgattcgtctctgcact
gatattggactaaaagaagtgcaagaatatgcaacaaaactcaagagactggaaaaaatg
aaagaaataagggagcagcgtataaagtctgggagagatggcagtggcggaatccgcagc
aagcgagaggggagtgctggcagtgagagtggccagaactgtagtgccagtagtaaaggt
gaccgactcaatgccaagctcagagctttacccgggacaaatgaaccttatgaaagtagc
agtaacaaagaaatagatgtctcctacgtggacccactgggccctcagattgaaagaccc
aaaactgctgccaaaaagaggatggaagaggacgattttgccgatgaagagctgggagag
gatctgcttccggaataa
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