Echinops telfairi (small Madagascar hedgehog): 101643909
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Entry
101643909 CDS
T08707
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04151
PI3K-Akt signaling pathway
etf04382
Cornified envelope formation
etf04510
Focal adhesion
etf04512
ECM-receptor interaction
etf04518
Integrin signaling
etf04820
Cytoskeleton in muscle cells
etf04926
Relaxin signaling pathway
etf04933
AGE-RAGE signaling pathway in diabetic complications
etf04974
Protein digestion and absorption
etf05146
Amoebiasis
etf05165
Human papillomavirus infection
etf05200
Pathways in cancer
etf05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101643909 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101643909 (COL4A4)
04518 Integrin signaling
101643909 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101643909 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101643909 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101643909 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
101643909 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
101643909 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101643909 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
101643909 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101643909 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
101643909 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101643909 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etf04147
]
101643909 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
etf00536
]
101643909 (COL4A4)
Exosome [BR:
etf04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101643909 (COL4A4)
Glycosaminoglycan binding proteins [BR:
etf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101643909 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101643909
NCBI-ProteinID:
XP_045150193
UniProt:
A0AC55DEM3
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MAVRRCSLGWLKPISVVPWSLALVLFSVHPAFVSGKKHAGPCGGRDCSTCQCFPEKGARG
QPGLLGPQGPIGPLGSPGPIGIPGEKGMQGHSGLPGEAGEKGDKGPTGVPGFPGLDGIPG
HPGSPGQRGKPGVNGHNGSRGDPGLPGENGAPGPGGPPGLPGEKGEKGESVFLLGGIKGG
QGDRGDPGPPGFPGSRGVSGPAGPMGDPGEPGLRGPPGHPGDPGLKGNPGVGVKGQKGYP
GEVGQQGSPGPTLLVEPPNAGLYKGEKGVQGMPGSRGPPGPSGLKGKPGLGEKGEKGIAG
FPGPPGDPGFHGSPGFPGLKGESGLTGNPGPFGFPGSKGDPGDRGRPGPPGVVLTPPVPL
KVSLLVSLGGMMGPPGPQGFPGYPGLPGTAGVPARADSVPGKPGNPGPPGLPGAPGIQGP
PGSEVVYCRAGYPGPQGLKGKVGPPGGRGCKGEKGNEGLCACEPGPMGPPGPPGLPGMQG
SKGDMGLPGWLGGKGDPGPPGVEGSPGALRKGEKGDTVVSRVKGNKGERGPQGPPGFPGQ
QGQDGQDGHAGRRGDPGPPGDHEDATPGGQGFPGPPGPPGREGARGPPGLGFPGPPGERG
RPGAPGHPGMRGFDGLKGQRGDTILCNMTYPGRPGPPGVDGPPGPMGFPGTQGTPGPRCF
DGPKGRRGKPGLSKIPGPPGFCGDMGDPGFEGDKGASLPGPPGLPSSPGVNGQKGLPGDP
AYGPPGPPGKSGPAGVPGVKGPRGDPGLPGAAGPPGSPGIPGLMGPKGRKGGAGLPGTPG
PAAHSCDRGAPGMPGQPGFPGTPGTPGAPGWKGQRGDEGFPGPAGMKGLPGAPGHQGAGG
LPGLPGIPGPIGVDGLPGLPGPQGPWGLPGVSGFPGERGGPGPEGRPGRKGERGEKGWPG
LLGDQGARGAKGERGPPGDAGEMELLSRKGATGEPGPPGDDGVPGETGDKGDPGMRGRRG
EPGRPGSPGFYSGEPGRKGQPGLPGPPGPPGSPGPIGIIGFPGFPGEQGGPGPPGPTGFP
GMDGMKGLKGNAGDPASMLGPPGPKGEPGSLGCPGHFGVPGEHGLPGDQGPTGPAGRPGL
PGLSGPPGCPGDRGVPGLRGHPGETGDPGPRGFMGHPGVPGPPGIKGSLGSPGLNGLHGL
KGQKGTKGASGLHEMGLPGPMGMPGLKGETGDPGSPGISPPGLFGEKGPPGPPGRPGPRG
SAGPPGRAPKGDIPDPGPPGEPGPPGPDGPRGAPGPPGTPGSVALLRGEPGDCGLPGPPG
SPGPPGPRGCNGSPGCDGSAGQKGPMGFPGLQGPPGFPGMPGEKGFPGPPGHQGPLGPPG
PRGEPGPPADADACPRIPGLPGVPGHRGPEGAMGIPGIRGTPGLGCKGKQGLDGRKGEPG
IPGMPGPSGHKGDKGDAGYPGVSGPPGAPGDPGPKGYRQGYLSGFLLVLHSQTDQEPACP
VGMPKLWTGYSLLHLEGQEKAHSQDLGQAGSCLSMFSTLPFAYCNTQQVCHYARRNDKSY
WLASAAPLPMMPLSEEEVRPYISRCAVCEAPAPAVAVHSQDQTIPPCPRSWRGLWIGYSF
XXHTGAGSQGGGQPLMSPGSCLEDFRAAPFLECQGRQGTCHFFANKYSFWLTTVKPAVQF
SAAPSPDTLKESQAQRQKISRCQVCMKHG
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagaaggtgctctctggggtggctcaagcccatcagcgtagttccctggtcc
cttgcacttgtcctcttctctgtacaccctgcatttgtgagtgggaagaaacatgctggt
ccctgtggaggaagagactgctccacttgccagtgctttccagagaagggggctcggggt
caaccaggactattggggccgcaggggccaatcgggcccctagggtccccgggacccatt
gggattccaggcgagaaagggatgcaaggtcacagtggtcttccaggagaagcaggcgag
aagggagataagggcccaacgggtgttcccggatttccaggtttggatggcatacctgga
cacccggggtctcctggacaaagaggcaaacccggtgtaaacggccacaatggctcaaga
ggtgacccaggacttccaggagagaatggcgctccgggtccaggaggccccccaggtttg
cctggggaaaagggagaaaagggagagtcggtgttccttttaggcggcatcaaaggtggt
cagggagacagaggggacccaggacctcctggcttcccgggatctaggggagtgagtgga
ccagcaggcccaatgggtgacccaggagagccggggttaagaggacctcctgggcatcct
ggggatccgggtttgaagggtaaccctggcgtgggagtcaaggggcagaagggctacccg
ggtgaggttggccagcaaggttctccaggaccaacccttttggtggagccacctaacgct
ggtctctacaaaggagaaaagggggtccaaggaatgcctggaagtagagggccacccgga
ccttctggactcaaggggaaacctggtcttggggaaaaaggagagaaaggtattgctgga
ttcccaggccctccgggtgaccctggtttccatggatctccaggctttccaggattgaag
ggagaatcgggactgactggtaatcctgggccatttggatttcctggctcaaagggagat
cctggagaccgtggacgcccaggaccaccaggtgtcgtgctgactccacctgttccactc
aaagtttcattattggtttctcttggaggtatgatgggaccccctggcccccaagggttt
cccggttatccggggcttccggggacagccggtgttcctgcgagagctgactcagttcca
gggaaaccagggaacccaggaccccctggcttgcccggcgcaccagggatacagggacct
ccaggatcagaagtggtatattgtcgtgctggataccctggaccacaaggactgaaaggc
aaggtgggtcctcccggaggaagaggctgcaaaggagaaaaaggaaacgaagggctttgt
gcctgtgagcctggtcccatgggcccccccggcccccccggactccctgggatgcagggt
agtaaaggcgacatgggactccctggctggcttggaggaaaaggtgacccaggccctcct
ggtgtggaaggatcgccgggtgccctgagaaaaggagaaaaaggcgacacggttgtatcg
agagttaaagggaacaaaggagaacgaggtcctcagggacccccaggattcccagggcaa
cagggacaagatggtcaggatggacatgctggaagaagaggagacccaggacccccagga
gatcatgaagacgcaacccctggtggtcaagggttccctggaccaccgggacctccgggc
agagaaggagccaggggacctccaggcctgggatttcctggtccaccgggagagagaggg
agaccaggagctcctggccaccctggcatgagaggctttgatggtctgaagggtcagaga
ggtgatacaattttgtgtaacatgacctacccggggaggccaggccctccaggtgttgat
ggacctccaggtcccatgggattcccgggtacccagggcactcccgggccgaggtgtttt
gatggaccaaagggccgacgtggcaaaccaggactatccaagataccaggcccacctggt
ttttgtggcgacatgggagacccaggctttgaaggggacaagggggcttccctcccgggg
cccccaggccttcccagctcccctggtgtgaatggtcagaaaggactcccaggtgaccct
gcttatgggcccccaggacctccgggaaagagtggtcctgcaggagtgccaggagtgaaa
gggccccgaggtgacccaggacttccaggggctgcagggcctcctggcagtccgggaatt
ccaggtctcatgggccctaaaggcaggaagggaggtgctgggttaccaggcaccccaggc
ccagctgctcattcctgtgatcgaggcgcccccgggatgccaggccagccaggattccct
gggaccccaggaacgccaggtgccccaggctggaagggacagcgaggggatgaaggtttt
cctggaccagctggaatgaagggtcttcctggagccccgggacatcagggggccggcggg
ctcccaggactgccagggatcccaggccccattggggtcgatggtctacctggccttccg
ggcccccagggaccctggggcctgcctggtgtctcaggttttccaggagagagaggagga
cctggcccagagggacggcctggcagaaagggagaacgaggagagaaaggctggcctggt
cttctgggagatcagggagcaagaggtgccaaaggagagagaggacctccgggggatgca
ggcgaaatggagctgctttcaagaaaaggagcaacaggagagcctggacctcctggagat
gatggagtcccgggagaaacaggtgataaaggagaccccgggatgcgaggaagaagagga
gaaccaggaagacctgggtcccctggattctacagcggggagcctggtagaaaaggacaa
ccaggtcttcctggacccccaggacctccaggctcacctggccctatagggatcattggt
ttcccaggatttcccggtgagcagggtggtccaggtcctccaggccccactggatttcca
gggatggacggcatgaaaggactgaaaggaaacgcaggagatcctgcaagtatgcttggt
cctcctggcccaaagggtgagcctggaagtcttggatgtccagggcatttcggagttcct
ggagaacacggcttgcctggtgatcaaggacccacgggaccagctggaaggccaggactg
ccgggcttgtctgggccacctgggtgtccaggtgatcgaggagtaccagggctgagggga
cacccaggagaaacaggggaccctggaccgaggggcttcatgggccatccaggggtacca
ggtcctccaggaattaaaggttccttgggatctcctggcttgaacggcttgcatggttta
aagggccagaaaggaaccaaaggtgcttcaggtttgcatgaaatgggcctgccaggtccc
atgggaatgccgggactgaaaggagagacaggggaccctgggagtcctggaatttctcct
ccaggcctttttggagaaaaaggtcctccgggccctccagggagaccaggaccccgtggt
tctgcgggtcccccaggaagagctcctaagggtgacattcctgacccgggtccacctgga
gagcccggcccgccaggtcctgatggtccaagaggtgctccgggaccccccgggacccct
gggagtgttgctctcctgagaggagagcctggtgactgtggcctgccaggaccaccaggg
tccccaggccccccaggccctcgaggatgcaatggttccccaggatgcgatggaagtgct
ggccagaaaggaccaatgggcttcccgggtctgcaggggcctcctggattccctggaatg
cctggagaaaagggttttcctggacctccaggccatcaagggccccttggccctccaggt
cccagaggtgaacctgggccacctgcagatgcagatgcgtgcccccgaatcccggggctt
cctggggtgccgggccaccgaggaccagaaggagccatggggatcccgggaataagaggc
acacctggactggggtgcaaagggaagcagggactggatggcaggaagggtgagcctggc
attcctgggatgcctgggccttcaggacacaagggtgacaagggagacgctggctaccct
ggggtatcaggccctcctggtgcccccggggatcccgggcccaaagggtacagacaggga
tacctcagcggcttcctcctggttctccacagtcagacagaccaagaacctgcctgcccc
gtgggcatgcccaagctttggacggggtatagtttgttacacctggaaggacaggagaaa
gctcacagccaagacctgggccaggccgggtcttgcctctccatgttcagcacgctgccc
tttgcctactgcaacacccagcaagtgtgccactatgcccggagaaacgacaagtcttac
tggctggccagcgccgccccgctgcccatgatgcccctctcggaagaggaggttcgcccg
tacatcagccgctgcgccgtgtgcgaggccccggccccggcggtagcggtccacagccag
gaccagaccatacccccgtgtccgcgctcctggaggggcctctggatcgggtactctttc
tnnnagcacacaggagctggctcccaaggaggcgggcaacccctcatgtcacccggcagc
tgtctggaagatttcagagcagcacctttcctcgaatgccagggccggcaggggacgtgc
cacttttttgcaaacaagtatagcttctggctgaccaccgtaaaacctgccgtgcagttc
tccgccgcaccatcaccagacaccttaaaggaaagccaggcccaacgccagaaaatcagc
cgatgccaggtctgcatgaagcatggctag
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