Echinops telfairi (small Madagascar hedgehog): 101643958
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Entry
101643958 CDS
T08707
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf02010
ABC transporters
etf04148
Efferocytosis
etf04975
Fat digestion and absorption
etf04979
Cholesterol metabolism
etf05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101643958 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101643958 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
101643958 (ABCA1)
04979 Cholesterol metabolism
101643958 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101643958 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
etf02000
]
101643958 (ABCA1)
Transporters [BR:
etf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101643958 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
101643958
NCBI-ProteinID:
XP_004711025
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MAWGSQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGIVGNFNKSIVSRLFSDAQRLLLYSQRDT
SMKDIHKVLGTLRQIENSNSSLKLRDFLVDNETFSGFLHHNLSLPRPMVHRVTGATVSLH
KVFLHGYQLHLTNLCNGSKLGEVIQLGDQELAKLCSLPRERLDAAERVLRSNMDILKPIL
AELNTTSPFPSKELAEATKTLLYSLGNLAQELFSMRSWSDMRREVLYLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAGTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPVTRHVMAEVNKTFQELAVFHDLEGMWEELS
PKIWTFMESSQEMDLVRTLLDSRGNDQFWEQQLEGLGWTAQDIVAFLAKHPEDAQDINGS
VYTWREAFNETSQAIQTISRFMECVNLNKLEPVATEVGLINQSMRLLDERKFWAGIVFTG
ITPNSVELPHHVKYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVQTGLEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSASLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLLSTLFSRANLAAACGGILYFILYLPYVLCVAWQDYVGFNLKVFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESLVEGDGFNLTTSVSMMLFDTFIYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGVSEIRMEEEPTHLKLGVS
IQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYACLKGLSEKHVKVEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLG
SCRNSSSTVSNLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDRQSCLRPFTEDDGVDPNDSDIDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPNLELQ
PWMYNEQYTFVSNDAPEDVSTQQLLNALTKDPGFGTRCMEGDPIPEMPCSVGEEEWTTAS
VPQTIMDLFQNGNWTMESPSPACQCSSDKIKKMLPVCPAGAGGLPPPQRRQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASRSHALPPSEEVNNAIEQMKK
HLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPNKYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFISPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRAVKTKFLPLNDEDEDVRRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICVGIPRGECFGLLGVNGAGKSSTFKMLTGDTTVTRGNAFLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLLKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLT
SHSMEECEALCTRMAIMVNGKFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKQLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKHQTVVDVAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggggtcccagttgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaggtggcctggcctctgtttatcttcctgatcctgata
tctgttcgactgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcagggacacttccttgggttcaggggattatctgtaatgccaacaacccc
tgctttcgttatccgactcctggtgaggctccaggcattgttggaaactttaacaaatcc
atcgtgtcgcgcctgttctcagatgctcagaggctgcttctgtacagccagagagacacc
agcatgaaggatatccacaaagttctgggaacgttacggcagatcgagaactccaactca
agtttgaagcttcgggacttcttggtggacaatgaaaccttctcaggattcctgcaccac
aacctgtctctgcccaggcccatggtgcaccgggtgacgggggccactgtcagcctccac
aaggtatttttgcatggataccagttacatctgaccaatctgtgcaatgggtcaaaacta
ggagaggtgattcaactcggtgaccaagaacttgccaagctttgcagcctgccaagggag
aggctggatgcagccgagcgagtgcttcgctccaacatggacatcctgaagccgatcctc
gcagaactcaacaccacatctcccttcccgagcaaggagctggctgaagccaccaaaacg
ttgctgtatagtctcgggaacctggcccaggagctgttcagcatgcggagctggagtgac
atgcggcgggaggtgctatatctgaccaatgtgaacagctccagctcctccacccagatt
taccaagcagtgtcccgcattgtctgtggtcaccccgagggcggggggctgaagatcaag
tccctcaactggtatgaggacaacaactacaaagccctctttgggggcaatggcaccgag
gaagatgctggcaccttctatgacaattctacgacgccttactgcaatgatttgatgaag
aatttggagtcgagtccactttcccgaattatctggaaagcgctcaagcctctgctcgtg
gggaagatcctgtatacacctgacactccagtcacgaggcacgttatggctgaggtgaac
aagaccttccaggaactggctgtgttccatgatctggaaggcatgtgggaagagctcagc
cccaagatctggaccttcatggagagcagccaagaaatggaccttgtccggacgctgttg
gacagcagaggcaatgaccagttctgggagcagcagttggagggcttaggttggacggcc
caagacatcgtggcgttcctggccaagcaccccgaggatgcccaagatatcaatggctct
gtgtacacctggagagaggctttcaacgagaccagtcaggcaatccagaccatctctcgc
ttcatggagtgtgtcaacctgaacaaactggaaccggtagcaactgaagttggcctcatc
aatcagtccatgcggttgctggatgagaggaagttctgggctggaattgtcttcaccgga
atcactcccaacagtgttgagctgccccatcacgtcaagtataagatccgaatggacatt
gacaatgtggaaaggacgaataaaatcaaggatgcgtactgggacccgggtcctcgggcg
gacccctttgaggacatgcggtacgtctggggaggctttgcctacttgcaggatgtggtg
gagcaggccatcatcagagtgcagacgggcctggagaagaagaccggggtctacatgcag
cagatgccctacccatgttacgtcgatgacatcttcctgcgggtaatgagccggtccatg
cccctgttcatgacgctggcctggatctactcagtggctgtgatcatcaagggcattgtg
tatgagaaggaagcgcggctgaaggagaccatgcggatcatgggcctggacaacggcatc
ctctggtttagctggttcatcagcagcctcatccctctgcttgtgagcgccagtctgctg
gtggtcattctcaagttaggaaacctgctgccctacagcgaccccagcgtcgtgtttgtc
ttcctgtccgtgttcgccgtggtgaccatcttacagtgcttcctgctcagcacgctcttc
tccagagccaacctggccgcagcctgtgggggcatcctctacttcattctctacctgccc
tacgtgctgtgtgtggcctggcaggactacgtgggcttcaacctcaaagtctttgcgagc
ctgctgtctcctgtggcgtttgggttcggctgcgagtactttgctctttttgaggagcag
ggcattggggtgcagtgggacaacctgtttgagagcctagtggagggagatggcttcaac
ctgacgacctccgtgtccatgatgctgttcgacaccttcatctatggagtgatgacgtgg
tacatcgaggctgtctttccaggccaatatggaattcccagaccctggtattttccttgc
accaagtcctattggttcggcgaggaaagtgatgagaagagccaccctggttccagccag
aagggagtatcagaaatccgcatggaggaggaacccacgcacctgaagctgggtgtgtcc
atccagaacctggtgaaggtttaccgagatggcatgaaggtggcagtcgatggcttggca
ctgaacttctatgagggccagatcacctccttcctgggccacaatggagcggggaagacc
acgaccatgtcaatcctgactgggttgttccctcctacctcgggcactgcctacatcctg
gggaaagacattcgctccgagatgagcaccatccggcagaacctgggcgtctgtccccag
cataatgtgctgtttgacatgctgaccgtcgaagagcacatctggttctacgcctgcctg
aaagggctctccgagaagcacgtgaaagtggagatggagcagatggccctggatgtgggg
ctgccacctagcaagctgaaaagtaaaacaagtcagttgtcagggggaatgcagaggaag
ctatctgtggccttggctttcgtggggggatccaaggttgtcattcttgatgagccgacg
gctggtgtggacccttactctcgcagagggatatgggagctgctgctgaaatatcgacaa
ggccgcaccattattctctccacacaccacatggatgaagcagacattctgggggacagg
attgccatcatttcccatgggaagctgtgctgtgtgggctcctccctgttcctgaagaac
cagctgggaacaggctactacctgaccctggtcaagaaggatgtggagtcctctctcggt
tcctgcagaaacagcagcagcaccgtgtcaaacctgaagaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tctgctatctccaacctcatcagaaagcatgtggcggaggcccggctggtggaagacatt
ggacacgagctgacctacgtgctgccctatgaagctgccaaagagggagccttcgtggag
ctcttccatgagattgacgaccggctctcggacctcggcatctccagttacggcatctca
gagacaaccctggaagaaatattcctcaaagtggctgaagagagtggagtggatgccgag
acctcagatggcaccttgccggcacgacggaacagacgggcctttggggacaggcagagc
tgtctccgtccatttacagaagacgatggtgtggaccccaatgattctgacatcgaccca
gaatcgagagaaacagacctgctcagtggcatggatggcaagggctcttaccaggtgaag
ggctggaaactcacacagcaacagtttgtggctcttttgtggaagaggctgctgattgcc
aagaggagtcggaagggattctttgctcagattgtgctgccagctgtgtttgtgtgcatc
gccctggtattcagcttgattgtgccgccctttggcaagtacccgaacctggagctgcag
ccttggatgtacaatgagcagtacacgtttgtcagtaatgatgctcctgaggatgtgagc
acccagcaactcttgaatgccctcactaaggaccctggcttcggcacccgatgcatggaa
ggggacccaattccagaaatgccctgctcggtgggagaggaggagtggaccacggcctca
gtcccccagaccatcatggacctcttccaaaatgggaactggacgatggagagcccttcg
cctgcctgccagtgtagcagtgacaaaattaagaagatgctgcccgtgtgtcctgcgggg
gcagggggcctgcctcctccacagagaagacagaacacggcagacatcctgcagaacctg
acgggaagaaacatttccgattatctggtgaagacctatgtgcagatcattgccaaaagc
ttaaagaacaagatctgggtgaatgaatttaggtacggcgggttctccctgggcgccagc
cgttcccatgcacttcctccgagtgaagaagttaataatgccatcgagcaaatgaagaaa
cacttgaagctggccaaggacagttcggcagatcgatttctcagcagcttggggaggttc
atgacgggactggacaccaaaaataacgtcaaggtgtggtttaacaacaagggctggcat
gccatcagctctttcctgaatgtcatcaacaatgccattctccgggccaacctgcagaag
ggagagaacccaaacaagtatgggattactgctttcaaccaccctctgaatctcaccaag
cagcagctctcggaagtggccctgatgaccacctcagtggatgtgctggtctccatctgt
gtcatctttgcgatgtccttcgtcccggccagctttgtcgtgttcctgatccaggagcgg
gtcagcaaggcgaagcacctgcagttcatcagtggggtgaagcctgtcatctactggctc
tccaattttgtctgggatatgtgcaactatgtggtcccagccacgctggtcatcatcatc
ttcatctgcttccagcagaagtcctacgtctcatccaccaacctgcctgtgttggccctg
ctacttctgctgtatgggtggtccatcacacctctcatgtacccagcctccttcgtgttc
aagatccccagcacggcctacgtggtcctcaccagcgtgaacctcttcatcgggatcaat
ggcagtgtggccactttcgtcctggagctcttcaccaacaacaaactgaacaacatcaac
gacatcctgaagtctgtgttcttgatcttcccacatttttgcctgggacgagggctcatt
gacatggtgaaaaaccaagcaatggctgacgccctggaaaggtttggggagaatcgcttc
atctcgcccctctcttgggatctggtgggccgaaacctctttgctatggctgtggaaggc
gtggtgttcttcctcatcactgttctgatccagtacagattcttcattagacccagagct
gtaaagacaaagttccttcccctgaatgatgaggatgaagatgtgaggcgggagagacag
agaattcttgacggaggaggccagaatgacatcttggaaatcaaagagttgacgaagatc
tacaggaggaagaggaagcctgccgtggacagaatttgcgttgggattcctcgtggcgag
tgctttggacttctgggagtgaacggggctgggaaatcatcaacattcaagatgttaact
ggagacaccactgttaccagaggcaacgcttttcttaacaaaaatagtatcttatccaac
atccacgaggtacatcagaacatgggctactgcccgcagtttgatgccatcacggagctg
ctgacgggcagagaacacgtggagttcttcgctctcttgagaggagtcccggagaaagaa
gttggcaaggttggtgaatgggcaattcggaaactgggccttctgaaatatggagagaaa
tatgctggtaattatagcggcggcaacaagcgcaagctgtccacagccatggctctgatt
ggcgggcctcccgtggtgtttctggatgaaccgaccacaggcatggatcccaaagcccgg
cggttcttgtggaactgtgccttaagcatcatcaaagagggacgatcagtggtgctgaca
tctcacagtatggaagagtgtgaagctctttgcactaggatggcaatcatggtcaacggg
aagttcaggtgtcttggcagtgttcagcatctcaaaaacaggtttggagatggttacaca
atagttgtacgaatagcaggctcaaacccggacctgaagcctgtccaggaattcttcggg
ctcgcctttccaggcagtgtcctaaaggagaaacaccggaatatgctgcaataccagctt
ccgtcttcgttgtcttcactggccaggatattcagcatcctctctcagagcaaaaaacaa
ctccacatagaagactactctgtttctcagacaacgctggaccaagtatttgtgaacttt
gccaaggaccaaagtgatgatgaccacttaaaagacctgtcgttgcacaaacaccagaca
gtggtggacgtggcagtgctcacgtcctttctccaggatgagaaagtgaaagagagttat
gtatga
DBGET
integrated database retrieval system
