Echinops telfairi (small Madagascar hedgehog): 101644198
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Entry
101644198 CDS
T08707
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etf03041
]
101644198 (DHX35)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101644198 (DHX35)
Spliceosome [BR:
etf03041
]
Complex C
Other components
Complex C specific factors
101644198 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
Cas3-like_C_2
AAA_7
AAA_30
RsgA_GTPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
101644198
NCBI-ProteinID:
XP_004698044
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MAAPVGPVKFWRPGTEGPGVSIAEERQSLADNAVTSVVYNPHAALSIEQQRQKLPVFKLR
NHILYLLENHQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVAVAGRV
AEERGAVLGHEVGYCIRFDDCTDLLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHE
RTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEVRGPFSQETLEPAGSSLGSLTNEQTM
VMDLTLDLFSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVEAVVSMLIEQARSLA
RTGMKKHLRVLPMYAGLPAFEQMKVFERVPRSVRKVIVATNVAETSITISGIVYVIDCGF
VKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFDKLPQATVPEM
QRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMR
IAEFPLNPMFAKMLLESGHFGCSQEILSIAAMMQIQNIFVIPPNQKSQAIRVHRKFAVEE
GDHLTMLNVYEAFIKHSKSSQWCQDHFLNYKGLVRAATVREQLKKLLVKFQVPKRSSEGD
PDPVLRCIVSGFFANAARFHSTGAYRTVRDDHELHIHPASVLYAEKPPRWVIYNEVIQTA
KYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKVQDL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgtgggacccgtgaagttctggcgacctggcaccgaggggccaggcgtc
agcatcgctgaagaacgacagagcctagcggacaacgctgtgacaagcgttgtttacaat
cctcatgccgccctctccatagagcagcagaggcagaagctgccggtgttcaagcttagg
aatcatatattgtacttgctagaaaaccatcagacggtggtgattgttggagaaacagga
tgtgggaaaagcacgcagatcccacagtaccttgcagaagctggctggacagccgaaggc
agagtggtcggtgtgacccagcctcgaagagtggctgctgttgcagttgcagggagagtt
gcggaggaaagaggtgcggtgctgggccatgaggtgggctactgcatccgctttgacgac
tgtaccgacctgctggctacaagaattaagtttttgactgatggaatgctggtcagggag
atgatggttgaccctttgctaaccaaatatagtgtcatcatgctggacgaagcccacgag
aggaccttgtataccgacattgccattggcttgttgaaaaaggttcagaagaagcgaggg
gaccttcgactgatcgtggcctcagccactctggatgcagaggtaagaggacccttttcc
caggagacactggagccagctggcagttcattagggtctctaaccaacgagcagaccatg
gtgatggacttaaccctagatcttttcagtcctgttccagattatatcaaatcaactgtt
gagacggtggtgaagattcaccagacagagggcgatggagatgtactggcattccttact
ggccaggaggaggtggaagccgtcgtgtccatgctcattgagcaggctcgctccttggcc
cgcaccgggatgaagaagcacctgcgcgttctccccatgtacgctgggctgcctgccttt
gagcagatgaaagtgtttgaacgagtgccacgcagcgtcagaaaggtgatagtagccacc
aatgtggcggaaacctccatcaccatcagcggcattgtgtacgtgatcgactgtggcttc
gtgaagctccgggcctacaatcccaggacggccattgaatgcttggtggtggtccctgta
tcccaggcctcagccaaccagcgtgcaggccgtggtggccgtaaccgctcaggaaaatgt
taccgactttatacagaggaagcctttgacaagctgccccaagccaccgtgcctgagatg
cagcgcagcaacttggcgcctgtcatccttcagctgaaagcgctgggaatcgacaatgtc
ctcaggttccacttcatgtcgcccccgccagcacagtccatggtccaagctttggagtta
ctctatgccctgggaggcctggacaaggactgtcgcctcaccgagccgcttggcatgagg
atagcggagtttcctttgaatcccatgtttgcaaaaatgctgcttgaatcaggacatttc
ggctgttctcaagagatcctcagcattgcggccatgatgcagatccagaacatctttgtg
atcccccccaaccagaagtctcaagcgatccgcgtgcaccgcaagtttgctgtggaggag
ggcgatcatctcaccatgctcaacgtgtatgaagcattcatcaagcacagtaagagctct
cagtggtgccaggaccatttcctgaattacaagggtctcgtcagagctgcgactgtgaga
gagcagttgaaaaagctgctcgtcaaattccaagtacccaagagatctagtgaaggtgac
ccggatccagttctgaggtgcatcgtctcggggttctttgcaaatgctgcgaggtttcat
tctaccggagcttataggactgtccgggatgatcatgaattgcacatccaccctgcctca
gttctgtatgcagagaagccacctcgctgggtgatctacaatgaagtcatacaaaccgcc
aagtactacatgagagacgtgactgctattgagtcagcgtggctgttggagctggctcca
cacttctatcagcaaggaacgcacctgtctctgaaagccaaaagggccaaggtccaggac
ttgtga
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