Echinops telfairi (small Madagascar hedgehog): 101644896
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Entry
101644896 CDS
T08707
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X4
KO
K17943
pumilio RNA-binding family
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101644896 (PUM1)
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Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
101644896
NCBI-ProteinID:
XP_004705088
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All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQNFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPSALAVQQLTAAQQQQYALAAAHQPHIAGL
APAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAA
AAAAASNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAF
GQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVA
AAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPNNNLASSSFYGNNSLSSNSQSSS
LFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDHYKR
TSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTN
GSGRYISAAPGAEAKYRSVSSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNN
RYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGN
YVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQVINEMVREL
DGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC
LPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF
ASNVVEKCVTHASRTERAVLIDEVCSVNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQR
KIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagaggaaagcagtgctttggcaggactccttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcccaagcgcagccacagccagctgcaaatcaggctctcgcagctgggacg
cactccagccctgtcccaggatccataggagttgccggccgttcccaggacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgctggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctggagggcaga
gcaatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagaatttccatgtg
aacagtgaggtcaattctgtactgtccccacgatcggagagtgggggactaggcgttagc
atggtggagtatgtgttgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtgcagaatgggattgatgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggagcatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctattccaaaggccaagcgcacttgctgtccagcagttgaca
gcggctcagcagcagcagtatgcactagccgctgctcaccaaccacatatcgcaggttta
gcgcccgctgcatttgtccccaacccatacatcatcagtgctgctcccccagggacggat
ccatatgcagctggattggctgcagcagcgacactaggcccggctgtggtccctcaccag
tattatggagttactccctggggagtgtaccctgccagtcttttccagcaacaagctgct
gccgccgccgctgcctctaattctgctaatcagcagacgaccccacaagctcagcaaggg
caacagcaggttctccgaggaggagccagccaacgtcctttaaccccaaatcagaatcag
cagggacagcaaacagacccactggtagcagctgcagcagtgaattcggcccttgcattt
ggacaaggactggcagcaggtatgccagggtatcctgtcttggctcctgcggcttactac
gaccaaaccggtgcccttgtggtgaacgcaggagcgagaaatggtctgggagctcccgtt
cgacttgtagctccggctccggtcatcattagctcctcagctgctcaagcagctgttgca
gcagccgcagcttcagccaacggagcagccggtggtcttgctggaacaacaaacggacca
tttcgccctttaggcacccagcagcctcagccccaaccccagcagcagcccaataacaac
ctggcatctagctctttctatggcaacaactctctgagcagcaattcacagagcagctcc
ctcttctcccagggctctgcccagcctgccaacacgtccttgggatttggaagtagcagt
tctctcggcgccaccctgggatcagcccttggagggtttggaacagcagttgcaaactcc
aacactggcagtggctcccgccgtgactccctgactggcagcagtgaccattataagagg
acatcgagcagcttgacccccattggacacagtttttataacggccttagcttttcctct
tctcctggacccgtgggcatgcctctccctagtcagggaccaggacattcacagacacca
cctccttccctctcttcacatggatcctcttcaagcttaaacctgggaggactcacaaat
ggcagtgggcgatacatctctgctgctcccggtgcggaagccaagtaccgaagtgtgagc
agtgcctccagcctcttcagccccagcagcaccctgttctcttcctcccggttgcggtat
ggcatgtctgatgtcatgccctcaggcaggagcagacttttggaagattttcgaaataac
cggtaccccaacttgcaattgcgagagattgctgggcatatcatggaattttcccaagac
cagcatgggtccagatttattcagctgaaactcgagcgtgccacgccagctgagcgccag
ctcgtcttcaatgaaatcctccaggccgcttaccagctaatggtggatgtgttcggaaat
tacgtcatccagaagttctttgaatttggcagcctggagcagaagctggctttggcggag
cggattcgaggccacgtcctgtcgttggcgctacagatgtatggctgccgtgtaatccag
aaagctcttgaatttattcccgcagaccagcaggtaattaacgagatggtccgggagctg
gatggccacgtcctgaagtgtgtgaaagaccagaacggcaaccacgtggtgcagaaatgc
atcgaatgtgtgcagccccagtctctgcagttcatcatcgatgcgttcaaagggcaggtg
tttgctctgtccacgcatccctatggctgccgagtgattcagaggatcctggagcactgt
cttcccgaccagacactccctattctggaggagcttcaccagcacacagaacaacttgta
caggatcagtatggaaactacgtgatccagcacgtgttggagcatggtcgccctgaagat
aaaagcaagatcgtagcagaaatccgaggcaatgtgcttgtgctgagtcagcacaaattt
gcaagcaacgttgtagagaagtgtgtcactcatgcctcacggacagagcgtgccgtgctc
atcgatgaggtgtgctccgtgaacgacggtccccacagtgccttatacaccatgatgaag
gaccagtatgccaactacgtggtccagaagatgatcgatgtggctgagcccgcccagcgg
aaaattgtcatgcataagatccgaccacacattgcaactcttcgtaagtacacctatggc
aagcacatcctagccaagctggagaagtactacatgaagaacggcgttgacctggggccc
atctgcggcccccccaacggcatcatctga
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integrated database retrieval system
