Echinops telfairi (small Madagascar hedgehog): 101645935
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Entry
101645935 CDS
T08707
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
101645935 (VPS50)
Membrane trafficking [BR:
etf04131
]
Protein recycling
Others
EARP complex
101645935 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
101645935
NCBI-ProteinID:
XP_004702716
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESFSDLGAIESLRVPGKEEFRELREQATDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKRVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDIHHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLVDLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
NNMLGTEEMNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRRQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
VQLHEFKFMEQSRSPSVSPSKQSASSSSKALTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKGAYQEYDSDSDVPEELKRDYVDEQTGDVPTKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDMEVSVDPIGPLTAAEERKEKVPSPHLSQLVVLTSG
DTLYGLVERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDVD
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctcttatgactcgacagggtctgaaaagccctcctgagagcttc
agtgatcttggtgccatcgagagtctccgggtccctggaaaggaggaattcagggaactt
cgagaacaggcaactgaccctcaagctgaacaagaactaattaatagtattgaacaagta
tatttttctacagactcatttgatattgttaaatatgagctggagaagctccctcctgtt
ctcaatttgcaagaactagaggaatacagggacaaattgaaacaacagcaagctgcggtc
tctaaaagagtagcagatttaatccttgagaaacagcctgcttatgtaaaggaacttgaa
agagtgacttcattacagacaggccttcagttagctgctgttatctgcacaaatgggagg
agacacttgaatatcgccaaggaaggtttcacacaagctagtttaggccttcttgccaac
caaaggaagcgccagctgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtccgcctaagtgaaatgttggaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagctgccagcacatttaaacattacagttgtataagt
gaattgaattccaagctgcaagatactttagaacaaattgaggaacaactggatgtagct
ctttctaaaatctgtaagaattttgacatccaccattataccaaggttcaacaagcatac
agacttcttggaaaaacacagacagcaatggatcaacttcacatgcacttcacccaagcc
attcacaatactgtgtttcaagttgttcttggctatgtggagctgtgtgcaggaaataca
gatacaaaattccaaaagctgcaatataaggatctttgtacccacgtcacaccagacagc
tatatcccatgccttgttgacctctgcaaagcattgtgggaagttatgcttagctattac
aggactatggaatggcatgaaaagcatgacaatgaggacactacttcagcctctgaaggg
aataatatgctgggcactgaagaaatgaattttgatcggggctacgtcaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttactc
ggaacagacttgtctatattcaaatatgatgatttcatctttgtcttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtcagaagttttgcaagagtct
attagaagacaaagtgtcaattacttcaagaactatcatagaacccgacttgatgaactc
agaatgttcctagagaacgagacgtgggagctttgccctgtgaagtcaaatttcagcatt
gtgcaacttcacgaatttaagttcatggagcagtcccgttccccgtcagtctcgcctagt
aagcagtctgcctcctcttcctcaaaagcactgaccctgtttgaacagtactgcagtggt
gggaatccatttgaaattcaagccaaccacaaagatgaagaaacagaagacgtcttggct
tctaatgggtatgagtctgatgaacaagaaaagggtgcctaccaggagtatgacagtgac
agtgatgtccctgaggaactaaaacgagattacgtagatgagcagacaggtgatgttcct
acgaaaagtgtttctcgagaaaccttaaaaagcaggaagaaatcagattatagcctaaat
aaagtgaatgcacccatcttaacaaatactacattgaatgtaattagacttgttgggaaa
tatatgcagatgatgaacattcttaagccaattgccttcgatgtcatccacttcatgtca
cagctgtttgactattacttgtatgcaatatatacgttttttggtcggaatgattcattg
gaatcgacaggattaggccttagcagtagtaggttaagaacaactctaaacagaatacaa
gaaagccttatcgatatggaagtttcggttgatcctattggcccactcacagctgcggaa
gagagaaaggagaaggtgccgagcccacacctcagtcagctggtggttttgacatcaggg
gatacgttatatggattggtggaaagagtggtagccacagaatccttggtattcttggct
gaacaatttgagttccttcagccgcatctggatgctgtgatgcctgcagtcaaaaaaccc
tttcttcagcaattttattctcagactgtttcaactgccagtgaactgcgcaaaccaatt
tactggattgtagctggtaaagccatcgattatgaacaaatgctgctcctaatggctaat
gtgaaatgggatgtaaaagaaatcatgtcacagcataacatatatgtagatgcattgctg
aaggaatttgaacaatttaataggaggttaaatgaggtttctaagagggttcggatacct
ttgcctgtgtctaatatactttgggaacattgtattcgactggctaatagaactattgtg
gaaggatatgccaacgtcaagaaatgtagtaatgagggtcgtgccttgatgcaattggat
tttcagcagtttttaatgaaacttgagaaactaacagatatcagacccattcccgataag
gaatttgtggaaacgtacattaaagcctactacctgactgagaatgatatggaacgctgg
atcaaagagcacagggagtattctacaaagcagctgaccaatctggtgaacgtttgcttg
ggatcccatatcaataagaaagcaagacagaaacttctggcagctatagacgatgtagac
agaccgaaaagataa
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