Echinops telfairi (small Madagascar hedgehog): 101646244
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Entry
101646244 CDS
T08707
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03082
ATP-dependent chromatin remodeling
etf04714
Thermogenesis
etf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101646244 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101646244 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101646244 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etf03000
]
101646244 (ARID1B)
03021 Transcription machinery [BR:
etf03021
]
101646244 (ARID1B)
03036 Chromosome and associated proteins [BR:
etf03036
]
101646244 (ARID1B)
Transcription factors [BR:
etf03000
]
Eukaryotic type
Helix-turn-helix
ARID
101646244 (ARID1B)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101646244 (ARID1B)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101646244 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
101646244
NCBI-ProteinID:
XP_045150477
LinkDB
All DBs
Position
Unknown
AA seq
1738 aa
AA seq
DB search
MDPMVMKRPQLYGMGSSPHSQPQQSSPYPGGSYGPPGPQRYPIGLQGRTPGAMAGMQFPQ
QQVPPQYGQQGLSGYCQQGQQPYYNQQPPPPHLPPQAQYLPSPSQQRYQPQQDMSQEGYG
TRPQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQG
DQSNPAQSPFSPHASPHLASIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPG
SQSEASVHPAMSQSPMPQERGFMAGSQRTPQMSQYGPQQTAPPMSPHPSPGGQMHPGISS
FQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGVNANSQMHGQGPSQQ
CGAIPLGRMPPAGMQSRPFPGNLSSMTPSSPGMPQQGGPGMGPPMPTVNRKAQEAAAAVM
QAAANSAQSRQGSFPGMNQGGLMASSAPYSQPMNNSSGLMSTQVPPYSMTPNMVNSSTDM
VSPGESKLPLKADGKEEGPPPPESKSKDSYSTQGISQPPTPGNLPVPSPMSPSSASISSF
HGDESDSTTSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGS
PVSSLPAVGKKPLDLFRLYMCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQY
IQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAE
VPGDLKPPTPASTPHGQMTPMQGGRSGTISVHDPFSDASDSSFSKRNSMTPNAPYQQGMS
MPDMMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQAANSSMQDMYNQSPAGAMSSLGMGQ
RQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAK
RHEGDVYSMQYGGQQQELYGQYGGSYSGPDRRPLQGQYPYPYNRERLQAPGQMQPHGLPP
QMLGGPLQAASSEGPQQPVWAARNDMPYPYQARQGPGGPAQAPPYPGVSRTEEMLVPDQR
INHESQWPSHVSQRQPYMPSSASMQPLTRPPQSSYQTPPSLPNHSSRAPSPASFQRALEN
RMSPSKSPFLPSMKMQKAMPSGPSSQVAGPAPQPPPIRRELTFPAGSVEASQPVLKQRRK
ITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVE
YFRKCLIDIFGILMEYEVGDPSQKALGQARRGEGSPPAEAAGGEEEEAAAAGMEDEEEDD
EEEEDEDEEDGEKAEAEEDRSGAALASPDAAPAETPKQASKFDRLPIKVVKKNRLFVVDR
SDRVTVWQEGGGGRAPRRRPPRAPGASKRVPAAPEPPEKRFLATIDDVLSARPGALPEDA
APGGGQPDSSKLPLGIHQAKSHRSILLLEDEPRSRDEAPLCTIAHWQDSLAKRCLCVSNI
VRSLSFVPGNDAEMSKHPGLVLILGQLILLHHQHPERKRAPQTYEKDDDEDQGAACSKDE
WWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVG
PNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMS
MALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHGLLHMQTPPLEPPS
VDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVVCDVLFQIGQL
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggacccgatggtgatgaagaggccgcagttgtacgggatgggcagtagccctcactcg
cagccccagcagagcagcccctaccctggcgggtcctatgggccccccggcccccagcgg
taccccattggcctccaaggccgcaccccaggggccatggcagggatgcagttccctcag
cagcaggtgccgcctcagtacggacagcaaggtctgagtggttactgccagcagggccag
cagccgtattacaaccagcagcctccgcctccgcacctccctccgcaggcgcagtacctg
ccctcgccgtcccagcagaggtaccagccgcagcaggacatgtctcaggaaggctatgga
actaggcctcaacctccgctggctcccgggaaacccaaccatgaagatttgaacttaatc
cagcaagaaaggccatcaagtttaccggacctgtccggctccattgacgacctccccacg
ggcacggaagcaactctgagctcagcagttagcgcctcggggtccacgagcagccagggg
gatcagagcaatccggcacagtcccccttctccccacacgcctccccgcacctcgccagc
atccccgggggcccgtcgccctcccccgtgggctcgcctgtcgggagcaaccagtcaagg
tccggccccatctctcctgcaagtattccaggcagccagatgccgccgcagccccccggc
agccagtcggaggccagcgtccaccccgctatgagccagtctccgatgccccaggagaga
ggctttatggcaggctcacagagaacccctcagatgtctcagtacggaccccagcagaca
gcaccgcccatgtcaccccacccttctccggggggccagatgcaccctggaatcagcagc
tttcagcagagcaactccagtgggacatacggtccgcagatgagccagtatggaccccaa
ggtaactactccagaccccccacgtatagcggggtgcccagcgcgagctacagcggcccc
gggcccggcatgggtgtcaatgcgaacagccagatgcacggacaggggcccagccagcag
tgtggggctatacccctgggacgaatgccaccggccgggatgcaaagcagaccgtttcct
ggaaacctgagcagcatgacccccagctctcccggcatgccgcagcagggagggccaggg
atggggccgcccatgcccactgtgaaccgtaaggctcaggaggcggccgcggccgtgatg
caggctgctgcaaactcggcgcaaagcaggcagggcagctttcccggcatgaatcagggt
ggactgatggcctccagcgcaccctacagccagccaatgaacaacagctcaggcctgatg
agcacgcaggtcccgccctacagcatgacgcccaacatggtcaacagctccacagatatg
gtgtctcctggagagtccaaattgcccctcaaagccgacggcaaagaagaagggcccccg
ccgcccgagagcaagtcaaaggacagctacagcactcagggtatttcccagcccccaacc
ccaggcaacctgcccgtcccttcccccatgtccccgagctccgccagcatctcctccttc
cacggagatgagagtgacagcaccaccagccccggctggccaaagaccccatccagcccc
aagtccagctcatccaccaccaccggggagaagatcacaaaggtgtatgagctggggaac
gagccagagaggaagctgtgggtggaccgatacctcaccttcatggaagaaagaggctct
cccgtctccagcctgcccgccgtgggcaagaaacccttggacttgttccgactctacatg
tgtgtcaaagagatcggaggcttggcccaggtgaataaaaacaagaagtggcgtgagctg
gcaaccaacctcaacgttggcacttccagcagcgccgccagctccctgaagaagcagtac
atccagtacctgtttgccttcgagtgcaagatcgagagaggggaagagcccccaccggag
gtcttcagcactggggacaccaagaagcagcccaagctccagccaccctctcctgctaac
tcaggatctttgcaaggcccgcagaccccgcagtccactggcagtaactccatggcagag
gttccaggtgacttgaagccaccaacgccggcctccaccccccacggacagatgacccca
atgcagggtgggagaagcggcacgatcagcgtgcacgaccccttctcggatgccagtgac
tcatcattctccaaacggaactccatgaccccgaatgccccgtaccagcagggcatgagc
atgccggacatgatgggcaggatgccttacgagcctaacaaggacccctttggtggaatg
agaaaagtgcctggaagcagcgagcccttcatgacgcaaggacaggcggccaacagcagc
atgcaggacatgtacaaccagagtcctgcgggagccatgtccagcctgggcatgggccag
cggcagcagttcccttacggggccagttacgaccggaggcatgaaccatacgggcagcag
tacccgggccaaggccctccctcaggacaacccccatatggaggccaccagcctggcctg
tatccgcagcaaccgaactacaagcgccacatggacggcatgtatgggccgccagccaag
cgccacgagggcgacgtgtacagcatgcagtacggcggccagcagcaggagctgtacggc
cagtacggaggctcctactcgggcccggaccgcaggcccctgcagggccagtacccgtac
ccctacaaccgggagcggctgcaggcgcccgggcagatgcagccgcacgggctcccgccg
cagatgctgggtgggcccctgcaggccgcctccagcgagggtccccagcagcccgtgtgg
gcggcgcgcaacgatatgccttatccctaccaggcccggcagggccccggcggcccagcc
caggcgcccccctaccccggcgtgagccgcaccgaggagatgctggtgcccgaccagcgg
atcaatcacgagagccagtggccttcccacgtcagccagcgtcagccttacatgccgtcg
tccgcctccatgcagcccctcacgcggcccccgcagtcctcctaccagacaccaccatca
ctgccaaaccacagctccagggcgcccagccccgcgtccttccagcgcgccctggagaac
cgcatgtcgcccagcaagtcccccttcctgccctccatgaagatgcagaaggccatgccc
tcggggccctcctcgcaggtggccggcccagcgccccagccaccccccatccggagggag
ctcacctttcctgccggctccgtggaagcctcgcagcccgtcttgaaacagaggcggaag
attacctcaaaagacattgtaactcctgaggcctggcgcgtgatgatgtccctcaaatca
ggtctcctggccgagagcacctgggctctggacactataaatatcctcctgtatgatgac
agcacggtcgccaccttcaatctctcccagctgtcggggttccttgagcttctggtggag
tacttcagaaaatgcctcatcgacatcttcgggattctcatggagtacgaagtgggagac
cccagccaaaaagccctggggcaggcgcgcagaggggagggctcgccccccgccgaggcg
gcagggggagaggaggaggaggccgccgccgcggggatggaggatgaggaggaggacgac
gaggaggaggaggacgaggacgaggaggacggcgagaaggccgaggcggaggaggaccgg
agcggtgcggccctcgcctccccggatgccgcccccgcggagacgcccaagcaggcgagc
aagttcgaccggctgcccatcaaggtggtcaagaagaaccgcctgttcgtggtggaccgc
tccgaccgggtaacagtttggcaggagggagggggcgggcgggcgccgcgccggcgcccg
ccgcgcgccccgggcgccagcaagagggtgccggcggcgcccgagccgcccgagaagcgc
ttcctggccaccatcgacgacgtgctgtcggcgcggccgggggcgctgcccgaggacgcc
gcgcccggcggcggccagccggacagcagcaagctgcccctgggcatccaccaggccaag
agccaccgcagcatcctgctgctggaggacgagccgcgcagccgcgacgaggcgccgctg
tgcaccatcgcgcactggcaggactcgctggccaagcgctgcctctgcgtgtccaacatc
gtgcgcagcttgtccttcgtgcctggcaacgacgccgagatgtccaagcacccgggcctg
gtgctgatcctgggccagctgatcctcctgcaccaccagcaccccgagcgcaagcgggcc
ccgcagacgtacgagaaggacgacgacgaggaccagggggcggcctgcagcaaggacgag
tggtggtgggactgcctcgaggtgctgagggacaacacgctggtcacgctggccaacatt
tccgggcagctggacttgtccgcgtacacggagagcatctgcctgcccatcctggatggc
ctgctacactggatggtgtgcccttcggcagaggcgcaagacccctttcccaccgtgggg
cccaactcggtcctgtcgccccagagactcgtgctggaaaccctctgtaaactcagcatc
caggacaacaacgtggacctcatcctggccacgccgcccttcagccgccaggagaaattc
tacgcgacgttagttaggtacgttggggaccgcaagaacccagtctgtcgagaaatgtcc
atggcgctcttatcgaacctcgcccaaggggacgcgttagccgcgcgggcgatcgctgtg
cagaagggaagcattgggaacttgataagcttcctggaggacggggtcacgatggcccag
taccagcagagccagcacggcctcctgcacatgcagacccctccgctggagccccccagc
gtggacatgatgtgcagggcggccaaggcgctgctggccatggccagggtggacgagaac
cgctccgagttcctcttgcacgagggccggctgctggacatctcgatatcggcggtcctg
aactccctggtggcgtctgtcgtctgtgacgtactctttcagatcgggcagttatga
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integrated database retrieval system
