Echinops telfairi (small Madagascar hedgehog): 101646444
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Entry
101646444 CDS
T08707
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03082
ATP-dependent chromatin remodeling
etf04714
Thermogenesis
etf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101646444 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101646444 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101646444 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etf03021
]
101646444 (SMARCA4)
03036 Chromosome and associated proteins [BR:
etf03036
]
101646444 (SMARCA4)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101646444 (SMARCA4)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101646444 (SMARCA4)
Chromatin remodeling factors
BAF complex
101646444 (SMARCA4)
PBAF complex
101646444 (SMARCA4)
GBAF(ncBAF) complex
101646444 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
HDA2-3
ResIII
DUF2009
Motif
Other DBs
NCBI-GeneID:
101646444
NCBI-ProteinID:
XP_045146224
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYSQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHSSSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPAP
PNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQ
PTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEI
LQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRR
DTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDF
KEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKK
DKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENGEGQTPAIGPDGEPL
DETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEE
EEEEEEQPQPAQPPTLPVVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALA
RGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGK
TIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKIRWKYMIVDE
GHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW
FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA
LQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEH
LGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFK
YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ
DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE
RRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETV
NQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE
EEKMFGRGSRHRKEVDYSDSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDA
GSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGR
QLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTF
NLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKL
GRKEKAQDRLKGSRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggcactcctcggccggggccttccccgggccca
ggcccctcccctggggccatgttgggccccagccctggtccctctcctggctctgcccac
agcatgatggggcccagcccgggccccccctcagcaggacaccccatcccaacccaggga
cctggagggtaccctcaggataacatgcatcagatgcacaagcccatggagtccatgcat
gagaagggcatgtcggatgacccccgctacagccagatgaagggcatggggatgcggtcg
ggcggccatgcagggatggggccgccgccgagcccgatggaccagcattctcaaggctac
ccctcaccactgggcggctccgagcattcctccagccccgttccagccagtggcccatcc
tcaggcccacagatgtcatccgggccaggaggggcccccctggatggtgccgacccccag
gccttagggcagcagaacaggggcccaaccccatttaaccagaaccagctgcaccagctc
cgagctcagatcatggcatacaagatgctggcccgggggcagcccctccctgatcacctg
cagatggcagtgcagggcaagcgacccatgcccgggatgcagcagcagatgccaacgcta
cctccgccctccgtgtccgccacaggccccgggcctgggcctggccctggccccgcacct
ccaaattatagcaggccgcacggtatgggagggcccaacatgcctccaccaggaccctca
ggtgtgcccccagggatgccgggacagcctcctggagggcctcccaagccctggcctgaa
ggacccatggcaaatgctgctgcaccaaccagcacacctcagaagctgatccccccgcag
ccaacaggccgcccttcacccgcacccccagcagttccacctgctgcctcaccggtgatg
ccgccacagacgcagtcgccggggcagccagcccagcccgcccccatggtgccactgcac
cagaagcagagccggatcacccccatccagaagccgaggggcctcgaccctgtggagatc
ctgcaggagcgcgagtacaggttgcaggctcgaattgcacaccgaattcaggaacttgaa
aaccttcccgggtccctggccggggatttgcgaaccaaagcgaccattgaactcaaggcc
ctcaggctgctgaacttccagaggcagctgcggcaggaggtggtggtgtgcatgaggcgg
gacacagcccttgagacagccctcaatgccaaggcctacaagcgcagcaagcggcagtcc
ctgcgcgaggcgcgcatcacggagaagctggagaagcagcagaagattgagcaggagcgc
aagcgccggcagaagcaccaggaatacctcaacagcattcttcaacatgccaaggatttc
aaagagtatcaccgctcagtcacgggcaagatccagaagcttacaaaggcagtggcaacg
taccatgccaacacagagcgggaacagaagaaggagaatgagagaattgagaaggagcga
atgcggaggctcatggctgaggatgaggaaggctaccgcaagctcattgaccagaagaag
gacaagcgcttggcctacctcctgcagcagacggacgagtatgtggcgaacctcacggag
ctggtgcggcagcacaaggccgctcaggttgccaaggagaagaagaagaaaaagaaaaag
aagaaggcagagaatggggaaggacagacacctgcaatcgggccggacggcgagcctctg
gatgagaccagccagatgagtgacctgccagtgaaagtgatccacgtggagagcgggaag
atcctcacgggcacagatgcccccaaagcagggcagctggaggcctggctggaaatgaac
cctgggtatgaagtagcaccgcgatctgacagtgaggagagtggctctgaagaagaggaa
gaggaggaggaggaggagcagccacagcctgcgcagccgcccacccttcctgtggtggag
gagaagaagaagattccagatccagacagcgatgacgtctctgaggtggatgcccggcac
atcattgagaatgccaagcaagatgttgacgatgaatacggcgtgtcccaggcccttgct
cgtggcctgcagtcctactacgctgtggcccatgctgtcactgagagagtggataagcag
tcagcgctgatggtcaacggtgtcctcaagcagtaccagatcaaaggcctggagtggctg
gtgtccttgtacaacaacaacctgaacggcatcctggccgacgagatggggctgggcaag
accatccagaccatcgcgctcatcacgtacctcatggagcacaagcggatcaacgggccc
ttcctcatcatcgtgcccctctcgacgctatcaaactgggcgtatgaatttgacaagtgg
gctccctctgtggtgaaggtgtcctacaagatccgctggaagtacatgattgttgacgaa
ggccaccgcatgaagaaccaccactgcaagctgacccaggtcctcaacacgcattacgtg
gccccccgccgcctgctgctgacgggcacaccactgcagaacaagctccccgagctctgg
gcgttgctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgagcagtgg
ttcaacgccccctttgccatgactggagagaaggtggacctgaatgaagaggagaccatt
ctgatcatccgtcgtctccacaaagtgctgcggcccttcctcctccggcggctcaagaag
gaggtggaggcccagttgccggaaaaggtggaatacgtcatcaagtgtgacatgtctgcg
ctgcagcgtgtcctctaccggcacatgcaggccaaaggggtgctcctgactgacggatct
gagaaagataagaagggcaaagggggcaccaagaccttgatgaacaccatcatgcagctg
cggaagatctgcaaccacccgtacatgttccagcacatcgaggagtccttttccgagcac
ttgggctttactggaggcatcgtccaggggttggacctataccgagcctcagggaaattt
gagcttctggataggattcttcccaaactgcgggcgaccaaccacaaggtgctgctgttc
tgtcagatgacctccctcatgaccatcatggaggactactttgcatatcgaggtttcaag
tacctccggctcgatggaactacaaaggcggaggaccggggcatgctactaaagaccttc
aatgagcccggctccgagtacttcatcttcctgctcagcacccgggccggggggctgggc
ctgaacctccagtcagccgacactgtgatcattttcgacagtgactggaacccccaccag
gacctgcaggcacaggaccgcgcgcaccgcatcgggcagcagaacgaggtgcgcgtgctc
cgcctttgcacagtcaacagtgtggaggagaagatcctggccgccgccaagtacaagctc
aacgtggaccagaaggtgatccaggccggcatgttcgaccagaagtcctcgagccatgag
cggcgggccttcctgcaggccatcctggagcacgaggagcaggacgagagcagacactgc
agcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggcgtcaac
cccgacctggaggagccacctctaaaggaagaagacgaagtgcccgatgacgaaaccgtc
aaccaaatgattgcccggcacgaagaggagtttgacctgtttatgcgcatggacctggac
cgcaggcgcgaggaggcccgcaaccctaagcggaagccgcgcctgatggaggaggacgag
ctgccctcgtggatcatcaaggacgatgccgaggtggagcggctgacctgtgaggaggag
gaggagaagatgtttggccgtggctcccgccaccgcaaggaggtggactacagtgactct
ctgacggagaagcagtggctcaagaccctgaaggccatcgaggagggcacgctggaggag
attgaagaggaggtccggcagaagaaatcgtcgcgaaaacgcaaaagggacagtgacgcc
ggctcctccacaccgaccaccagcacccgcagccgagacaaggatgacgagagcaagaag
cagaagaagcgcggacgacctcccgccgagaagctctccccgaaccctcccaacctcact
aagaagatgaagaagatcgtggatgccgtgatcaagtacaaggacagtagcagtggacgt
caactcagcgaggtgttcatccagctgccctcgaggaaggagctgcccgagtactacgag
ctcattcgcaagcccgtggacttcaagaagatcaaggagcgcatccgcaaccacaagtac
cgcagcctcaacgacctggagaaggatgtcatgctgctgtgtcagaacgcgcagaccttc
aacctggagggctcgctgatctacgaggactccatcgtcctgcagtcggtcttcaccagc
gtgcggcagaagatcgagaaggaggacgacagcgagggcgaggagagcgaggaggaggag
gagggcgaggaggaaggctcagagtccgagtcccgctccgtcaaggtgaaaatcaagctc
ggccgcaaggagaaggcccaggaccgcctaaaggggagccggcggcggccgagccggggg
tcccgggccaagccggttgtgagcgatgacgacagtgaggaggagcaggaggaggaccgc
tcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
