Echinops telfairi (small Madagascar hedgehog): 101646828
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Entry
101646828 CDS
T08707
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04270
Vascular smooth muscle contraction
etf04360
Axon guidance
etf04611
Platelet activation
etf04625
C-type lectin receptor signaling pathway
etf04810
Regulation of actin cytoskeleton
etf05135
Yersinia infection
etf05152
Tuberculosis
etf05163
Human cytomegalovirus infection
etf05200
Pathways in cancer
etf05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101646828 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101646828 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
101646828 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
101646828 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
101646828 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101646828 (ARHGEF12)
05205 Proteoglycans in cancer
101646828 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
101646828 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
101646828 (ARHGEF12)
05152 Tuberculosis
101646828 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
101646828 (ARHGEF12)
Membrane trafficking [BR:
etf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101646828 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Ribonuc_2-5A
Motif
Other DBs
NCBI-GeneID:
101646828
NCBI-ProteinID:
XP_004712876
LinkDB
All DBs
Position
Unknown
AA seq
1573 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESSTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRPETYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADPEVEPSVVGHMSPLMTSPHSPG
ASGNMERITSPVLVGEENNVVHNQKVEILRKMLQKEQERLQVLQEDYNRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVCMPCRPLCDALTASELESDTGNGLARIDSSSGDGS
RPSSDNADSPRSGLKERIYLEESPDKSDVVLDPETQSLIGSPATRTVPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVSVPEEISTDLEKRRPELIPEDLHRHYIHTMQERVHPEVQKHL
EDFRQKRSMGLTLAESELTKLDAERDKDRVTLEKERACAEQIVAKIEEVLMAAQAVEEDK
SSTMQYVILVYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEDKGKRRGFTSI
LGPPRRPSRHDNSAIGRAMELQKQRHPKHLSTISSVSPEPQDSAKLRQSVQAPEGTDAGY
LPANPMSSVAVGTTVSQEGGKENDLASKQVGETPTSGDSTDGTPRTPNTIFDFPPPPLDQ
VQEEDCEGERVIEHGTPKPFRKFDTTAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDVLQ
LHVGLNEQMKAVRKRNETSVIDQIGEDLLSWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQEAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEKEKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILAATADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQPTK
PIPLPQPPPDEGDNEEEEPSKLKVGHHGISVTGLQSPDRDLGLESPLMPSQQQSPSLGTS
GKAEVDDLFVAERQFAKERHADVTVKEVGGNCQVAVPDPHLPVSEERWAADALRNLGLLK
RLLEQQLGWPERRTQEDWQQSPRSRTASRGVQADGGGQNSESRKACLPFRTGTGDLPVGG
SPRTSGDSSAPRDSAILASHENQAGIVVFMDQVVMTPEMPPSEPEGALDEGGEHFFDARE
AHSDDNPSDGGGAVKKEEQGVDPRISGNYFILDGYETVQESSTDEEAVSSLSPQPAAGGP
SPDSTHQQQHSPQSAHSDGPNSPFTPELLAQQRWGAMEDSCLQTQSPSSCAELPHQVMEY
IRKIEADLEHLKVPPVSTSLDLRVRTPSYSMTEMLMLANLLGARPERCFHHSPQARARVL
FAAAGLKHRGLRP
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtcgactatcaccgacaggtttcctctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcatcaacagataagaagcagaaagttgaacgcagtaca
tcacatgattttgaccccacagacagctcctccaagaagacaaagtctagttcagaggag
agtagacccgagacatatggtcttgtgcagcgctgtgtgattatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaatccagtcttcgtacagtctgtaaaagaagat
ggagcagccatgcgggctggagttcagacaggtgatcgcatcatcaaggtgaatggaact
ctggtgactcattcaaaccatttggaggtggtgaagctaatcaaatctggttcctatgta
gctctcacagtgcagggacgaccgcctgggtcgccccagatcccactagctgaccctgaa
gtagagccatccgtcgttggacatatgtctcccctcatgacgtcccctcattctcctgga
gcatctgggaatatggagaggatcactagccctgtgctcgtgggggaggaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggagcgacta
caggtattgcaggaagattacaaccggacccctgcccaaagactgctcaaagagatccag
gaggccaagaaacacattccccagctgcaagagcagttatccaaagccacaggctccgct
caggatggagcggtgtgcatgccctgcaggcctctgtgtgatgcgctgacagccagtgag
ctggagtcagatactggtaatggactggccaggattgactccagcagtggagatgggtct
cggcccagtagtgacaatgcagatagccccagaagtggcctgaaagagaggatttatcta
gaggaaagtccagacaagagtgacgtcgttctggaccctgagactcagtcattgattggg
agtcctgcaacacgtacggtgcctcatattattggagcagaggacgatgattttggtact
gaacatgaacagatcaatggacagtgtagctgtttccagagcattgagctgctaaaatcc
cgccctgctcacttggctgtttttctacatcatgtggtttcacagtttgaccctgcaaca
ctgctctgttatctctactctgacctgtacaagcagaccaattccaaagagactcggcga
gtcttcctggagtttcaccagttcttcctggaccgatctgcacaccttaaagtttctgtc
cctgaagaaatatctacagatctggagaagagacgaccagaacttattcctgaggatctg
catcgccattatatccacactatgcaagagagagtccacccagaagttcagaagcacttg
gaagattttcggcaaaaacgtagtatggggctgaccttggctgaaagtgagctgactaaa
cttgatgcagagcgagacaaggaccgggtgactctggagaaggaacgggcatgtgcagaa
cagattgttgccaaaattgaagaagtgctgatggctgctcaggctgtggaagaagataaa
agttccacaatgcaatatgtcatcctggtgtacatgaagcatctgggagtaaaggtgaaa
gagccccgaaatttggagcacaagcgaggtcggattggatttctccccaaaatcaagcaa
agcatgaagaaagacagggaaggcgaagacaaagggaagcgcagaggattcaccagcatc
ctcgggcccccaaggagacccagccgccacgacaacagcgcaattggcagagccatggaa
ctacagaagcagcgccaccctaaacacttatccacaatctcttctgtgagtccagaacct
caggactctgccaagttgcgccagagtgtgcaagccccggagggaacagacgctggatac
ctgcctgctaatcccatgtcctctgtggctgtagggaccactgtttcccaggaaggaggc
aaagagaatgatctggcatcaaagcaagttggagaaaccccgacctctggagactccaca
gatggcacaccacgtactcccaacaccatctttgacttcccaccgccgccgttagaccaa
gtgcaggaggaggactgcgaaggcgagagggtgattgaacatgggacaccaaagcccttt
cgaaagttcgacaccacagcttttggagagagtcagagtgaggatgaacagtttgaaaat
gacttagagaccgatccccccaactggcagcagcttgttagtcgagaagtgttactggga
ctaaaaccttgtgagatcaaaagacaggaggtgatcaatgaattgttctacactgaaaga
gctcatgtgcgaacactgaaggttcttgatcaagtgttctatcagcgagtgtccagagaa
ggaattttgtcaccttcagagctacggaaaattttttcaaatctggaagatgttcttcaa
cttcacgttgggttgaatgagcaaatgaaagctgttcgaaaaaggaatgagacttccgtg
attgatcagattggggaagatttgctgagctggttcagtggcccaggagaggagaagttg
aaacatgcagctgccaccttttgtagtaaccagcccttcgccctggaaatgatcaagtct
cgtcagaaaaaggactctcggttccagacttttgtgcaagaagccgagagcaatccattg
tgccgccgtctgcagctgaaggatatcatccctacccaaatgcaaaggctgaccaagtac
cctctcttactggacaacattgccaaatacacagaatggccaacagagaaagagaaggtg
aagaaagccgcggatcactgtcgtcagatcttaaattatgtcaaccaggctgtcaaggag
gcagaaaacaagcagcgcttagaagattatcagcgtcgccttgatacttctaatctgaag
ctttcggagtacccaaatgttgaagagctcaggaatttggatttaaccaagcggaagatg
attcatgagggaccgttggtttggaaggtgaatagagataagacaattgacctctacaca
ctgctgctggaagacatcctggtcctgttacagaagcaggacgacaggctggtgctcagg
tgtcacagtaagattctggcagcgacagctgatagcaagcacacgtttagccctgtcatt
aagctgaacacggtgctggttagacaagtggcaacagataacaaagctttattcgtcatt
tccatgtcagacaatggagcccaaatttatgaactggtggctcaaacggtgtcagaaaag
actgtctggcaggacctcatctgtcggatggctgcatcggtgaaagagcaacccacgaag
cccattccgttaccacagcctccacctgacgaaggagacaatgaggaagaagaaccttca
aaattaaaagtgggacatcatggcatttcagtcacaggcctgcaaagtccagaccgagac
ctggggctagagtctcccttgatgccatcccagcagcagtctccctcgctgggcacctct
gggaaggcggaggtcgacgacctcttcgtggctgagagacagtttgccaaggagcggcac
gcagacgtcaccgtcaaggaagtgggaggaaactgtcaagttgcagtcccagatccccat
cttcctgtctctgaagaacggtgggcagcggatgcactgaggaatttgggtctgctgaag
cggctgctggagcagcagctgggctggcctgagcggcgcactcaggaagactggcagcag
tccccacgctcaaggacggcctcgcggggggtgcaggcagacggcggaggccagaactcc
gagagcaggaaggcctgccttcccttcagaactggaacaggtgaccttcccgttggcggc
agtccaaggacttcaggtgactcttctgctccacgggattcggcgatactggcatcccac
gagaaccaggcaggtatcgtcgtcttcatggaccaagtggttatgaccccggagatgcct
cccagcgagcctgagggggcgctggacgaaggcggagagcacttttttgatgcccgtgaa
gcacacagtgatgataacccatcagacggcggtggcgccgtgaaaaaggaggagcagggt
gtcgatccacgcatctcaggaaactacttcatccttgacggctatgagaccgtgcaggag
agctccacggacgaggaggccgtctcctcgctcagcccacagcctgcggccggcggcccc
tctccggactccacccaccagcagcagcattcgccgcagagtgctcattcggatgggcca
aactcccccttcacccccgaactcctggcccagcagcgctggggagccatggaggacagc
tgcttgcagacccagagtccctcttcctgtgcagagctgccacaccaggtcatggagtac
attcgtaagatcgaggcggacctggaacacttaaaggtacctcctgtttcaacctccttg
gacttgcgtgtgcgaaccccatcgtatagcatgacagaaatgctgatgttggcaaacttg
ctcggggccagacccgaacgctgctttcatcacagtccacaggcccgagcacgagtgttg
ttcgctgctgcgggcttgaagcacagagggctccggccctga
DBGET
integrated database retrieval system
