Echinops telfairi (small Madagascar hedgehog): 101647183
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Entry
101647183 CDS
T08707
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etf03009
]
101647183 (UTP20)
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101647183 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DUF7051
GAIN_ADGRG2
DUF4042
Motif
Other DBs
NCBI-GeneID:
101647183
NCBI-ProteinID:
XP_004700415
UniProt:
A0ABM0IHX2
LinkDB
All DBs
Position
Unknown
AA seq
2791 aa
AA seq
DB search
MKIKPVSHKTENTHRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIKNSFAYQPLLDLVVQLARDLQT
DFYPHFPDFFLAITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMTNIYSMYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNMLFNLMFLDLDKHPEKVEGVGQLLFEMCKGVRNMLH
SCTGQAVRLLLQKLGPVTETETLLPWSFIGETLKSMVRSTAFYVYKEHFGTFFECLQESL
LGLHTKVTPMNCSESSDQMRRLLAMYLILVQHGNGSKVTHPVAVCKVLSQTLQIANLSSP
CRETLLDVISALILGENISLPQTLIKETIEKIFESGFERHLIWNFSEVMFAMKQFEQLFL
PSFLSYLENIFLIDDAIVKDEALAILTKLILNKAPPPTAGLMAIEKYPLVFSQQTVGPYL
KQMKTRSREEKEPIPVLDHLLSIIQLPPNKDATYLSQSWAALVVLPHIRLLDKEKVIPLV
TCLIESLLTAIDKGSFGKGTLFVLCQAVSALLSLEESSELLRLVPVERVKNLILMLPLEP
SVLLLADLYYQRLSLCGCREPLSQEALMELFPKLQGNISTGASKIRLLTIRILNHFEVRL
PELMEDDGLSESQAVFAVIRQAELVPATVNDYREKLLHLRKLRHDVVRTAVPDGPLQEVP
LRYLLGMLYVNFSPLWEPVIELISSHAHEMENKQFWKVYYEHLEKAAARAEKELQSDEQN
EEQSTGDGRWEQTQEGDVGALYHEQLALKTDCRDRLDHTNFRFLLWRALAKFPERVEPRS
RELSPLFLRFINNEYYPADLQVAPAQDLQKKGKRGGAEDTEEEPTARDDEESEEEVPQDE
PVQRKKTRRAAAKQLIAHLQVFAKFSNPRALYLESKLYELYLQLLLHQDQTVQKITLDCI
MTYKHPHILPYRENLQRLLEDRSFKEEIVHFSISEDNSVVKAAHRADLFPILMRILYGRM
KNKTGTKTQGKSASGTRMSIVLRFLAGTQPEEIQIFLDLLFEPVNHFQNGECHSAVIQAV
EDLDLSKVLPLGRQHGILNSLEIVLKNISHLISAYLPKILQILLCMTATVSHILDQREQI
QLRFINPLKNLRRLGIKMVTDIFLDWESYPFRTEEIDAVFHGAVWPQITRLGSESQYSPT
PLLKLISVWSRNARYFPFLAKQKPGHPECDILTNVFAILSAKNLSEATASIVMEIVDDLL
NLSDFEPTELVQSLPVTGCVYPNIAENADESVTVGGRLILPHAPAILQYLSKTTISAEKV
KKKKNRAQVSKELGILSKISKFMQDKEQSSLLITLLLPFLHRANIAQETEVDILVTVQNL
LKHCLDPTSFLKPLARLFSVIKNKLPRQLLCAIFQNLSEFESGLKYVTDVVKLNAFDQRH
LDDINFDVRFSAFQTITSYIKEMQTVDLNYLIPVMHNCFYNLELGDMSLSDNASVCLMSI
IKKLAALSFTEKEYREIIQRTLLERLRKGLKSQTETLQQDHTTLLSCLIQTFPDQLEFKD
LVQLTNCHDPEMDFFENMKHIQIHRRARALKKLAKQLLEGKTVLSSKSLQNYIMPYALAP
LFDEKMLKHENITIAATELIGAICKHLSWSAYIYYLKHFIHVLCTGQINQKLGVSLLVIV
LEAFHFDHQTLEEQMGKIQNEDGTVEVIEIPEHEAMELDEEGEDGEEKEGGWKSLSDDKK
ESGSPDAADPGETSAKESECVPKSFSCLPQNKEELERTIKNIHGTITGDILPKLHKCLAS
TTKREEEHKLVKSKVVNDEEVVRVPLAFAMVKLMQSLPQEVMETNLPGILLKVCALLKNR
AQEIRDIARSTLAKIIEDLGVRYLQYILKELQTTLVRGYQVHVLTFTVYMLLHGLTNKLQ
VGDLDSSLDIMIEVFNHELFGAVAEEKEVKQILSKIMEARRSKSYDSYEILGKFVGKDQV
TKLILPLKEILQNTTSLKLARKVHETLRRIIAGLIVNQEMTTEAILLLSYGLVSENLPLL
TEKEKNPAPPAPDPRLPPQSCLLLPPTPGRGGQKALVSKKTNMHIFVESGLQLLYLSLKN
SKIKSSSENVLEMLDPFVSLLIDCLGSRDVKVITGTLQCLIWVLRFPLPSIETKAEQLTK
HLFLLLKDYAKLGAAKGLNFHLVVNCFKCVTILVKKVKSYQITEKQLQVLLAYAEEDIYD
TSRQATAFGLLKAILSRKLLVPEIEDVMRRVSKLAISAQSEPVRVQCRQVFLKYILDYPL
GDKLRPNLEFVLAQLSYEHETGRGSALEMIAYLLDTFPQGLLHENCGVFFIPLCLMMGND
DSATCKKMAAATIKSLLSKMDLEKRDWLFDMVTSWFSAKKSLNRQLAALICGLFVESEGV
EFERRLGTVLPVIEKEIDPEKFTDIMEETEEKAADRLLFSFLTLISKLIKECHFVQLTKP
SEVLNQIWSHVHAHLRHAHSWVWLTAAQVFGLLFASCQPEELVRKWQTKKTQNRLPEPVA
VKLLTSDLEQKMRSISLASCHQLHSKFLDQSLGEQVVKNLLFVAKVLYLLVPDSDDKQDE
AEDDDGEEQGAVGGGVAPEEREGKTEGAKDEKEEVKEEPSKPATLSWLILKLSRMAKLES
AYTPRNLLKRTCIFKFLGAVAMDLGAEKVTPYLPMIIAPLFRELNSTYSEQDPSLKNLSQ
EIIELLKQLVGLESFSMAFASVQKQANQKRALRKKRKALEFVTNPDIAAKKKLKKHKNKS
EAKKRKIEFLRPGYKAKRQKSHGLKDLAMVE
NT seq
8376 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaagcccgtttcccacaagaccgagaacacgcaccggtttcttacatttgct
gaacgactagggaatgtgaatatcgatattattcaccggattgatagaaccgcaagctat
gatgaggaagtcgaaacctacttttttgaggggctgctgaaatggagagaattgaacctt
acagaacactttgggaaattttacaaagaagttattgacaaatgccagtcattcaaccaa
ttggtctatcatcaaaatgagatcgttcagagtttgaagactcacctgcaaattaagaac
agttttgcctaccagcctcttttggacttggttgtgcagttggcgcgagatctgcagacg
gacttctatccacactttccggatttttttctggccatcacatctatcctggagacccag
gacacggagttgttggaatgggcgttcacctcgctgtcctatctgtacaagtacttatgg
agactgatggtgaaggacatgaccaacatctacagcatgtacagtacactcctggctcat
aaaaagctgcatataagaaattttgctgctgagagctttacttttctcatgagaaaggtt
tctgataaaaatatgcttttcaacttaatgtttcttgacctggataagcatcctgagaag
gtggaaggagttggacagttgctctttgaaatgtgtaaaggagtcagaaacatgcttcac
tcctgtacaggccaggcggtcagactacttttgcaaaaactaggacctgttaccgaaaca
gaaacgctgctcccctggagcttcattggagaaaccctgaaaagcatggtcagatccaca
gcgttctacgtctacaaggaacattttggtacattttttgagtgtttgcaagaatccctc
ctgggtctacatactaaagtaaccccaatgaactgctctgaaagctctgaccagatgaga
agattattagcaatgtatctgatacttgtgcaacatggcaatgggtccaaggtaacccac
cctgttgccgtttgtaaggtattgtctcaaacattgcaaatagccaatctctcctcacct
tgccgggagacactcttggatgtgatatctgctttgatcctaggagagaatatttccttg
ccccagactctcatcaaagaaaccatagaaaagatttttgagagcggatttgaaagacat
ctcatttggaatttttcggaagtcatgttcgctatgaagcagtttgagcagctttttcta
ccaagctttctctcatatcttgagaatatcttcttgattgatgatgctatcgtcaaagat
gaagctctggctattctgacaaaactcattctgaacaaagcaccacctcccactgctggt
ttgatggccattgaaaagtaccctctggttttctcacaacagacggtgggaccctattta
aagcagatgaagactagatccagggaagagaaggaaccaattccagtgttggatcatctc
ttgtctataattcagctgcctccaaataaagatgctacttacctttcacagtcttgggca
gcacttgtcgtgttacctcatattaggcttctcgacaaagagaaggtaataccactggtc
acatgccttatagagtcactcctcacagctattgacaaagggagctttggaaaaggaacc
ttatttgttctctgtcaagctgtaagtgctctgctcagtttggaagaatcctctgaactt
ctccgtttggttcccgtggaacgtgtgaagaatttaatattaatgttgcctctggagcca
tccgtgttgctgttggctgatctctattatcagagattatccttgtgtggctgcagagaa
ccactttcgcaggaagctttaatggaattatttccgaagttacaaggaaacatttcaact
ggcgcatccaagatacggcttctgaccattaggattctaaaccattttgaagtccggctt
ccagaattgatggaggacgatgggctgtcagagagccaggctgtgtttgctgtaatacgc
caggcggaactcgtcccagccaccgtgaatgattacagagagaaactgctgcatctacgg
aagctgagacacgatgtggtgcgaactgcagtccccgatggcccactgcaggaggtgccg
cttcgttatttactaggcatgttatatgtgaatttcagtcctctgtgggagcctgtcatt
gaactaataagttctcatgcacatgaaatggaaaataagcagttctggaaagtctactat
gaacatcttgagaaagcagctgcacgtgctgagaaagagctgcagagcgatgaacaaaat
gaagagcaatcgactggagacgggcgttgggagcagacccaggaaggagatgtgggagct
ctctatcatgagcagttagcattgaaaactgactgccgggacagactggaccacactaac
ttccgctttttgctctggcgagctctggcaaaattccctgagagagtggagccacggtcc
agggagctttccccacttttcttgagatttatcaacaatgagtactatccagcagatctg
caagttgctccagcccaagatctgcaaaaaaaaggcaagagaggaggggcagaggacaca
gaagaggagccaactgccagagatgatgaggaatcagaagaagaggtcccccaagatgag
cctgtgcagagaaagaagacaagacgagctgctgccaagcagttaattgctcacttacaa
gtttttgctaagttttcaaatccacgggccttgtatctggaatccaaattatatgagctg
tatcttcagttgttgctacaccaagatcaaacggtccaaaagatcactctggattgcata
atgacatataagcacccgcatatcctcccttacagggaaaatttgcaaagattgcttgaa
gacagaagctttaaggaagaaatagtacatttcagcatttcagaagataattcagtagtg
aaagcagctcatcgagcagatctgtttcctattctgatgaggattttgtatggtcgaatg
aagaacaaaactgggactaaaactcaggggaaatccgcttcaggcacccgtatgtccatt
gttctgaggttcctcgctgggacccagcccgaagagatccagatattcttagacctgctc
tttgaacctgtgaatcacttccagaatggcgagtgccattctgccgtcattcaagcagta
gaagatttggatctgtcaaaggttcttcctttgggtcgtcagcatggaatcttaaatagc
cttgaaatagtgttgaagaacatcagtcatctaatcagtgcatacttaccaaaaatttta
cagatactgctctgtatgactgccacggtgtcacacatccttgaccaacgagaacagata
caactgaggtttattaatccgctgaaaaatttgagacgtcttgggatcaaaatggtgact
gatatctttttggattgggagtcctatccattcagaacagaagaaattgatgctgtgttt
catggtgccgtttggccccagatcaccaggcttggatctgagagccagtattctcctact
cctttgctgaagctcattagtgtctggagcagaaatgcaagatattttccttttctggct
aaacagaaaccggggcaccctgagtgtgatattttgaccaatgtttttgcaattctctca
gcaaagaatctgtccgaagccacagccagtattgtgatggaaatagttgatgaccttctg
aacctttcagattttgagcccacagaactagtccagagcttgccagtgaccggctgtgtc
taccccaatatagcagaaaatgcagatgagtctgtcacagtcggcggaagattaattcta
cctcatgcacctgcaattcttcagtatctcagcaaaaccacgataagtgcagaaaaggtg
aaaaagaaaaagaatagagcacaagtcagcaaggaacttggcattctttcaaagatcagc
aagtttatgcaagacaaagaacaaagttctttacttattacacttctccttcctttcctc
caccgggccaatattgcccaggagacagaggttgatattctggtgactgtacaaaacttg
ttaaaacattgcttggaccctacgagcttcctcaagcctctcgcaagactattctcagtt
attaaaaacaagttgccaagacaattgctctgtgcaattttccagaatctttctgagttt
gagagtggattaaaatatgttactgatgttgtcaagcttaatgccttcgatcaaagacat
cttgatgatatcaacttcgatgtccgcttctcagcgttccagaccatcacgtcctacatt
aaagagatgcaaaccgtggatcttaattacctaattccagttatgcataattgtttctac
aatctggagttaggagacatgtctttaagtgataatgccagtgtgtgtctgatgagtatc
attaagaagctagccgccttgagcttcacagagaaggaataccgagaaatcattcagcgt
acactcctggagagactgaggaaagggttgaagagtcagacagagactcttcaacaggat
cataccacactgctttcctgtttaattcaaacctttccagatcagctggaatttaaagac
ttggtacagcttaccaattgccatgacccagaaatggacttctttgagaatatgaagcac
attcagattcacaggcgagcacgagctctgaagaaactggcaaaacagctgctggaaggc
aaaactgtgctgtcttcgaaatctcttcagaattacatcatgccgtatgccctggcacca
ctttttgatgagaaaatgctcaagcatgaaaatataaccatcgctgctacagaacttatc
ggagctatatgtaaacatctctcgtggtcagcatatatatattacttgaagcattttatt
catgtcttatgtacaggacagatcaatcaaaaattgggtgtcagtttgctggttatcgtg
ttggaagcattccactttgaccaccaaactctggaagaacagatggggaagattcagaat
gaggacggcacagtggaagtgattgagataccagagcatgaagccatggagttagatgaa
gaaggggaggatggagaggagaaggaaggtgggtggaagagcctgtcagatgacaagaag
gaatcgggaagccccgatgcagccgatcctggagagacatcagccaaggaatctgagtgt
gtcccgaagtccttctcctgccttcctcagaataaagaagagttggaaagaaccattaaa
aacatccatggaaccataacaggggatatcctacccaagctccataaatgcctggcatct
acgacgaagagggaggaagagcacaagctggtcaagtcaaaggtcgtgaacgacgaggag
gtcgttcgagtgcctttagccttcgccatggtgaagctcatgcagtctcttccccaagaa
gtcatggaaacgaatctgccaggtattttgctgaaggtgtgtgcccttctcaagaataga
gcccaggaaatcagagacattgcacgcagcactctggcaaaaatcatagaagacctgggt
gtgcgctacctccagtatattttaaaggaattgcagactacacttgtccgtggctatcag
gtccatgtgctaactttcactgtgtacatgttgctgcacggcctcacgaacaagctccaa
gttggtgatttggactcttctttagacataatgattgaggtctttaaccatgagttgttt
ggtgccgttgctgaagagaaagaagtgaagcagatcctctccaaaattatggaggcccga
agaagcaagagttacgattcttatgaaatcctgggcaagtttgtaggaaaagaccaggtt
acgaaactgatccttccgttaaaagagatcttacaaaataccacgagtttaaaactggcc
cggaaagttcatgaaaccttacgtcgcatcatcgcagggttaattgtaaatcaggaaatg
acaacagaagccatcttattgctcagttacggtttggtcagtgaaaatctccccctgtta
acagagaaagaaaaaaatccagcaccccctgcgccggatccccgtctgccaccccagagc
tgccttctgctcccgcctactcctggtcgcggcggtcagaaggccctcgtgagcaagaaa
accaacatgcacatatttgtcgagtctgggcttcagctgctatatctgagtctgaagaat
tccaagatcaaatcttcgagtgagaatgttttggaaatgttggatccttttgtatctctc
ctcatagactgcctgggctccagggatgtgaaggtgattacaggcactctacagtgcctc
atctgggtcttgaggttcccgctgccttccatagaaaccaaggcagaacagctgaccaaa
cacctgttccttttgctgaaggactatgcaaagctcggggctgccaagggcctgaacttc
cacctggtggtcaattgtttcaagtgtgtgaccatactggtgaagaaagtgaagtcgtat
cagatcacggaaaagcagctgcaggtcctgctggcctatgcggaggaggacatctacgac
acctcccgacaagctaccgcgtttggtcttctcaaggccatcttatcaagaaagctgttg
gttccagaaatagaagatgtcatgcggagagtgtccaagttggcgatttctgcgcagagt
gagcccgtcagagtgcagtgcagacaggttttcctgaagtacattcttgactatcccctt
ggcgacaaattgagaccaaacctggaattcgtgctcgctcaactgagttatgaacatgag
accgggagagggtccgccttggaaatgatcgcctacctccttgacacgttcccgcagggc
ctgctccacgagaactgcggggtcttcttcatccccctctgcctaatgatggggaacgac
gactcggccacgtgcaagaagatggcggccgccaccatcaagtccctgctcagcaaaatg
gacctggagaaaagggactggctgtttgacatggtcaccagttggttcagtgccaaaaag
agcttaaatagacagctggctgccctgatctgtggcttattcgtggaaagtgaaggagtg
gaatttgagaggaggcttggcactgttcttcctgtgattgaaaaggaaatcgatcctgaa
aagtttacagatataatggaagagaccgaagaaaaggctgcagaccgcctcctgtttagt
ttccttacactgatcagtaaactcatcaaggaatgccatttcgttcagcttaccaagcct
tctgaggttttgaatcaaatatggagtcacgtgcacgcccacttgaggcatgcccacagc
tgggtgtggctcaccgcagcccaggtgtttgggttgctctttgcctcttgccaaccagag
gagctggtcagaaaatggcagaccaagaagactcaaaatagactccccgaacctgtggca
gtcaagctcctaacaagtgacctcgagcagaagatgagaagcatttctttagcttcttgc
catcagctgcattccaagttcttggatcagtccctaggagagcaggttgtgaagaatctg
ttgtttgtagccaaagtcttgtatctgctcgtacccgattctgacgataagcaagacgag
gcagaagacgatgacggggaagaacaaggggcagtcggaggtggtgtggccccagaggaa
agggaagggaaaacagaaggtgccaaagacgagaaggaagaggtgaaggaggagcccagc
aagccagccacgctgagctggctgatcctgaagctgtcgaggatggcaaagctggagtct
gcttatacacctagaaaccttttaaagagaacgtgcatctttaagtttcttggcgcggtg
gccatggatctgggagcagagaaggtgacgccgtacctcccgatgatcatagcccctttg
tttcgagagctgaacagcacctattcggagcaagatccttcgctgaagaatctatcccag
gaaattatagagttactcaaacagctggtcgggctggagagcttctcaatggcctttgcc
tccgtacagaagcaggcaaatcagaaaagggctctccggaaaaagaggaaggcgttggag
tttgtaaccaatcctgatattgctgccaagaaaaagcttaagaaacacaaaaataaaagc
gaagccaagaagaggaaaatagagttcctgcgcccaggctataaggccaagaggcaaaaa
agccacggcctgaaggatttggcaatggtggagtaa
DBGET
integrated database retrieval system
