Echinops telfairi (small Madagascar hedgehog): 101647246
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Entry
101647246 CDS
T08707
Symbol
PCDH18
Name
(RefSeq) protocadherin-18
KO
K16499
protocadherin delta 2
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etf04515
]
101647246 (PCDH18)
Cell adhesion molecules [BR:
etf04515
]
Cadherins
Protocadherins
101647246 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
BBS1
TMEM154
PAH
Syndecan
MPS-4
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
101647246
NCBI-ProteinID:
XP_004712184
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MRQMNAKMHFMLACALWMVVFSGGVLGKNLKYRIYEEQSSGSVIARLSEDVADVLFKLPN
PSTVRFRTMQRGKFPHLNVDEGTGEISIGTVIDREKLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSASDPDVGENSLHTYSLSDND
FFSIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLVDLNATDPDEGANGKIVYSFSSHVAPQIMETFKID
SERGHLTLFKQVDYEIIKSYEIDVQAQDLGPNSIPAHCKIIIEVVDVNDNKPEIDINLMS
PDKEEISYIFEGDPINKFVALVKVQDKDSGLNGEVLCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNLP
GAYITTVAATDPDQGENGHVTYTILESFILGKPITSYVTIDPSNGAIYALQSFDHEEVNQ
LSFVVEARDGGSPKQLVSNTTVVVTIIDENDNAPLVIEPVLRNHTAEISIPKGAESGSHV
TRIRAIDRDSGLNAELSCFIVSGNEEDIFVIDPRSCDIHSNVSMDSIPYTEWELAVIIQD
KGSPQLHTKVLLKCMIVEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRASPS
SSPTLERGQMGSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQGQYQ
PRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSDL
FLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQHSHPH
QSLEDDIQPADAGEKKKSFSTFGKDSPNDEDTGDSGTSSLLSEMSTVFQRLLPPSLDTYA
ESSEGDRSNSLERRKAPLAAKTMGYPQGVAAWAATTHFQNPTNSSGPALGPHSSVQPSSK
WLPAMEEIPENYEEDDFDNVLNHLNDGQHELMDASELVAEINKLLQDVRQS
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaatgaatgctaagatgcactttatgcttgcgtgtgcactctggatggtggtt
ttcagcggcggtgtactgggcaagaatttgaaatacaggatttatgaggaacagagctct
ggatcagtcattgcaagactatccgaggatgtggccgatgttttatttaagctgcccaat
ccttccactgttcggtttcgaaccatgcaaagggggaaatttcctcacctcaacgtggat
gaaggtactggggaaatcagcatagggactgtcattgaccgggaaaaactatgccagaaa
aacttgaactgctccatagagtttgatgtgatcaccctacccaccgagcatctgcaactg
ttccatattgaagtggaagtgctggatattaatgacaattcgccgcagttttcgagagcc
ctcatacctattgagatatctgagagtgcagcggttggcacgcggatcccgctggatagt
gcctccgatccagatgttggggagaattccctccacacctactccctctctgataatgat
ttcttcagtattgaggtacggaccaggactgacggagccaagtatgcagaactcattgta
gtccgagagctggatcgggagctgaagtccagctatgagcttcagctcactgcctccgac
atgggggtgcctcagaggtctggctcgtccatcctcaaaataagcatttctgattccaat
gacaacagccctgcttttgagcagcagtcttatataatacaactcttagaaaactctcca
gttggcactttgctcgtcgatctgaatgccacggatccagatgagggcgctaatgggaaa
attgtctattctttcagcagccatgtggctccccaaattatggagactttcaaaattgat
tcagaaagaggacatttgactcttttcaagcaagtggattatgaaatcatcaagtcgtat
gagattgatgttcaggctcaagacttgggtccgaattctatcccggctcattgcaaaatt
ataattgaggttgtagatgttaatgacaataaacctgaaattgacatcaacctgatgtct
cctgacaaagaagaaatctcttatatttttgaaggggatcctattaacaagtttgttgct
ttggtcaaggttcaggacaaagattctgggctgaatggagaagtactttgtaaactccat
gggcatggtcactttaaacttcagaagacttatgaaaacaattatttaatcttgactaat
gcaacgctggatagagaaaagagatccgaatacagtttgactgtaattgccgaggacaag
ggaacacccagtctctctacagtaaagcattttactgttcaaatcaatgatataaatgac
aatccaccccacttccagagaagccgttatgaatttgtcatttctgagaataacttaccg
ggagcatacatcaccactgttgcagccacagatcctgatcaaggagaaaatgggcatgtg
acttataccattttggagagtttcatcctgggcaagcccataacttcttatgtaaccatt
gacccatccaatggagccatctatgccctccaaagctttgatcacgaggaagtgaatcag
ctctcttttgtggttgaagcaagagatggagggagtccaaagcaacttgtaagcaacacc
acagttgtggtcaccatcattgatgaaaatgacaatgcccccttggttatagaacctgtg
ctacgtaatcacactgcagagatctccatccccaaaggggcagaaagtggctctcatgtc
acaaggatacgggcaattgacagagattcgggtctaaatgctgaactcagctgtttcata
gtatcaggaaatgaggaggatatctttgtaattgatccacgatcatgtgacatccattcc
aacgtgagcatggactccatcccttatacagaatgggaacttgcagtgatcatccaggac
aaaggcagtcctcagctgcataccaaagtcctcctaaagtgcatgatcgtcgagtatgcg
gagtcggtgacaagtacagcaatgacctcagtaagccaggcgtctttggatgtctccatg
attatcattatttctctaggagcaatctgtgcagtactgttggttatcatggtgctgttt
gccaccaggtgtaaccgggaaaagaaagacactagatcctacaattgcagggttgcagaa
tcaacttatcagcatcaccccaaaaggccgtccaggcagattcacaaaggtgacattaca
ttggtacctacagtaaatgggacactccctatcaggtctcatcacagagcgtctccatct
tcatctcctaccctagagagagggcaaatgggcagtcacaacagccaccagtccctcaat
agtttggtgacaatctcatcaaaccacgtgccagagaatttctcattggaactcacccat
gccacccctgctgttgaggtctcccagcttctttccatgcttcaccagggccaatatcag
ccgcggccgagctttcgaggaaacaaatactccaggagctacaggtatgcccttcaagac
atggacaaatttagcttaaaagacagtggccgtggtgacagcgaagcaggagacagtgat
tatgatttggggcgagattctcctatagacagacttctgggtgaaggattcagcgacctc
ttcctcacagatgggagaattccagcagctatgaggctttgcacggaggagtgcagagtc
ctgggacactcggaccagtgctggatgccgcctctgccctcgccctcttccgattacagg
agtaacatgttcattccgggggaagaattcccagcccaaccccagcactcccacccgcat
caaagtctggaggatgatatccagcctgcagatgccggcgagaaaaagaagagtttttcg
accttcgggaaggactccccaaacgacgaggacactggggatagcggcacctcctctctg
ctctcggaaatgagcaccgtgttccagcgcctcctgcccccttccctggacacctacgcc
gagagcagtgagggggaccggtccaactcactggaacgccggaaggcgcccttggccgcc
aaaaccatgggctacccacaaggggtcgctgcctgggcagccactacacactttcaaaat
cccaccaacagctctggaccggccctgggcccgcactccagtgtgcagccttcgtccaag
tggctgccggccatggaggaaattcctgagaactacgaggaagatgactttgacaatgtg
ctcaaccacctcaacgatgggcagcatgaactcatggatgccagcgagctagtggccgag
attaacaaactgctccaagatgtccgccagagctag
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