Echinops telfairi (small Madagascar hedgehog): 101647410
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Entry
101647410 CDS
T08707
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03015
mRNA surveillance pathway
etf05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101647410 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
101647410 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101647410 (HBS1L)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101647410 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_29
Motif
Other DBs
NCBI-GeneID:
101647410
NCBI-ProteinID:
XP_004702214
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKSAVEPGEEYDYGD
QKDSSSSLSNHQLSAVDQARLYSCLDYMREILGEAVPDEMLVEAVLQNKFDVQKAMAVLL
EPDKIQNLKVKSEGARSTGKIAKGKSVDSQSSRSDSEIVPKVAKMTVSGKKQTMGFEVPG
LTAEENGHSFHTPQKGPHSEDTSIASSDVLETVSKSVPSAHTMQASEEQSSTPTPVKRSS
KLKQQIDVKAELESRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMMKFETKTKMITLMDAPGHKDFIPNMITGA
AQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAINKMDQVNWQQERFQ
EITGKLGHFLKQAGFKESDVAFIPTSGLSGENLIRRSQSGELMQWYKGLCLLEQIDSFKP
PQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDE
PVDWAAAGDHVSLTLVGMDIIKINVGCVFCGPKDPIKACTRFRARILIFNIEIPITKGFP
VLLHYQTVSEPAVIKRLISVLNKTTGEVTKKKPKLLTKGQNALVELQTQRPIALELYKDF
KELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgttcgaggctataactacgacgaagattttgaagatgatgat
gtctatggccaatcagtagaagatgattattgcatttccccatcaacagcggctcaattt
atttactccagacgtgacaaatctgctgttgaaccaggagaagaatatgattatggagat
cagaaagactcatccagttccctttcaaaccatcaattaagtgctgtcgatcaagctcgt
ctttactcatgccttgattacatgagagagattcttggagaagctgtgccagatgaaatg
ttggttgaagcagttctccaaaacaaatttgatgtgcagaaggccatggctgtgcttctg
gagccagataaaatacagaacctgaaggtcaagagtgagggggcaagatctacaggaaag
atagcaaaaggaaaatcagtagattcccagtcatctagaagtgattcagaaattgtgcca
aaagttgctaaaatgactgtctctggaaagaagcagactatgggatttgaagtgcctgga
cttactgcggaggaaaatggtcacagtttccacacacctcaaaaaggacctcacagtgaa
gataccagcattgcttcttctgatgtcctcgagactgtttctaaatcggtcccttcagcc
cacaccatgcaggcttccgaagagcagagttcaactcccacacccgtgaaaaggtctagc
aaactgaagcagcagatagatgtgaaagcagaactggagagccggcaaggggggaagcag
ctcctcaacttagtggtcattggtcatgttgatgctgggaaaagtactctgatgggccat
atgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagagtct
aaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaagaa
agggaaaggggagttaccatggatgttggtatgatgaagtttgagaccaaaaccaaaatg
attacactaatggatgctccaggacataaggatttcattccaaacatgataaccggagcg
gctcaggcagatgtggctgtgttagttgtggatgccagccggggagagttcgaggccggc
tttgagactggaggacaaactcgagagcatgggctcctggtccgttctctgggagtgact
caacttgcagtcgcaatcaataaaatggatcaggttaattggcaacaagaaaggtttcaa
gagattactggaaagcttgggcattttctaaagcaagcgggttttaaggagagtgatgta
gcatttatacctacaagtggtctgagtggtgaaaacctcattaggagatctcaatcaggt
gaactcatgcaatggtataaaggactgtgcctgttagaacaaattgattccttcaagcct
cctcaacgatccattgacaaaccttttaggttgtgtgtctcggatgttttcaaagatcaa
ggatcaggattctgcgtaactggcaaaattgaagctggttatatccagactggtgaccgg
ctactggcaatgcctcctaatgaaacctgtacggcaaaaggaatcactctgcacgatgaa
cctgtcgattgggcggcagccggagaccatgttagtcttacgttggttgggatggatatc
atcaaaatcaatgttggctgcgtgttttgtggccccaaagatcccattaaagcttgcact
cgcttccgagcccgaatcctcatctttaatattgaaattcccatcactaaaggatttcct
gtgctgttacactaccaaactgtcagtgagcccgccgttattaaaagattgatcagcgtc
ttaaacaaaaccacgggcgaagtcaccaagaagaagcctaagttactgaccaagggccag
aatgcattggtggagctacagacacaaagaccgattgctctggagctgtacaaagacttt
aaagaactggggcggttcatgctgcgttacagcgggtctacaatagctgctggtgtcgtc
accgagatcaaagaatga
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integrated database retrieval system
