Echinops telfairi (small Madagascar hedgehog): 101647420
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Entry
101647420 CDS
T08707
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101647420 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101647420 (CNOT10)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101647420 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
ARM_TT21_N
TPR_12
ARM_TT21
TPR_8
TPR_7
TPR_MalT
SCAF11-like_C
TPR_17
DUF6058
Motif
Other DBs
NCBI-GeneID:
101647420
NCBI-ProteinID:
XP_045153613
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MAADKAPDQGAEKHEGTGQSSGLTDQEKELSSNAFQAFAAGNYDTCLQHLACLQDINKDD
YKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGSSNKNGKNETGNNTNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDSVCAPLSVGSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNSKSHDGDKFIPAPPSSPLRKQELENLKCSILACS
AYVALALGDNLVSLSHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENV
TDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEY
DKARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPTVKTLSEMR
KKPVFQSVHPIQPIQMPAFTTVQRK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacaaggctccagatcagggagcagagaaacatgaagggacaggtcagtcc
tctgggcttactgaccaggagaaggagttgtccagcaatgccttccaagcctttgcagct
ggaaattatgatacctgcctgcaacaccttgcctgcctacaagatataaacaaagatgat
tataaaataattctgaatactgccgtagctgagttctttaaaagtaaccaaacaacaaca
gataatttgagacagacacttaaccagctgaagaatcaggtgcactcagccgtggaagaa
atggacggactggacgatgttgagaacagcatgttgtattacaatcaggcagtcatcctg
taccacctccggcagtacacagaagccatctcagttggcgagaaactgtaccagttcata
gaaccttttgaagaaaaatttgcccaagccgtctgttttctgcttgtagacctgtacata
ttaacttaccaggccgagaaagctctgcatctccttgctgtgctagaaaaaatgatttcg
cagggaagcagtaacaaaaacgggaagaatgagactggtaataacaccaacaaagatgga
tctaatcataaagccgagagtggagctctgatagaagctgcaaaatcaaagatacatcag
tataaagtaagagcttatatccaaatgaagtccctaaaggcatgcaaaagagaaatcaag
tcagtcatgaacacggctggaaattctgcaccctctctatttcttaaaagcaattttgag
tacttacgaggcaattacagaaaagctgtgaaactactaaatagttcaaacattgctgaa
catccgggattcatgaaaacaggtgaatgtttgaggtgcatgttctggaataatcttggt
tgcatccattttgccatgagcaagcacaatttggggattttctactttaaaaaggctctg
caggagaatgacagtgtctgcgcaccgctcagcgtgggcagcaccgacccaggtaaaaaa
ttttctgggagacctatgtgtacattactaaccaacaagcggtatgagttattgtataac
tgtgggatccagctgcttcacattggaagacctctcgctgccttcgagtgtctgattgag
gccgtgcaagtttatcatgcaaatcctcgcctctggctgcgactggctgaatgctgcatt
gctgccaataaggggacttctgaacaagaaactaaaggtcttcctagcaaaaaaggaatt
gtacagtctattgttggtcaaggctatcatcggaagatagttctggcatcacagtccatc
cagaatactgtatataacagtaaaagccatgacggagataaatttattcctgctccacct
tcttctccattgaggaaacaggaactagaaaacttgaagtgctccatcctcgcctgcagt
gcttacgtggcgctggctttgggtgacaacctcgtgtctttgagtcacgcagataaactt
cttcagcagcccaagctgtcaggatctctgaagttcctgggccacttatatgctgcagaa
gccctcatttctctggacagaatatcggatgccatcacccacttgaacccggagaatgtc
accgacgtctccttagggatctcttcgaatgagcaggaccaaggatcagacaaaggtgaa
aatgaagccatggaatcctccgggaagcgggcccctcaatgctacccaagttctgtcaac
tctgcgaggaccgtgatgctcttcaaccttggcagcgcctactgcctgcggagcgagtat
gacaaagcccggaagtgtctgcaccaggcagcctccatgatccaccctaaagaggtaccc
cccgaggccatcctgctggctgtgtacctggaactgcagaatggtaatacccagctggcc
ctacagatcatcaagaggaaccagctgctcccaacagtgaaaacgctctcggagatgagg
aagaagccagtgtttcagtctgtgcacccgatccagcccattcaaatgccggccttcacc
acagttcagagaaagtga
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