Echinops telfairi (small Madagascar hedgehog): 101647627
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Entry
101647627 CDS
T08707
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101647627 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etf03021
]
101647627 (SF3B3)
03041 Spliceosome [BR:
etf03041
]
101647627 (SF3B3)
03036 Chromosome and associated proteins [BR:
etf03036
]
101647627 (SF3B3)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
101647627 (SF3B3)
Spliceosome [BR:
etf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
101647627 (SF3B3)
Complex B
101647627 (SF3B3)
Complex C
U2 SnRNP specific factors
101647627 (SF3B3)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
101647627 (SF3B3)
TFTC complex
101647627 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
101647627
NCBI-ProteinID:
XP_004704614
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgaccttgcagcgagccactggcatcagttttgccattcatggc
aacttttctggaaccaaacaacaggaaattgttgtttctcgtgggaagatattggagctg
cttcgtcctgaccccaacactggcaaagtacacactctcctaactgtggaagtatttggc
gttatccgatcgctgatggcctttaggctgacaggtggcaccaaagactacattgtggtt
ggcagcgactcaggtcggattgttatcttggagtatcagccatccaagaacatgtttgag
aaaattcaccaagaaacttttggcaagagtggatgccgccgtattgttcctggccagttt
ttagctgtggatcccaaaggacgagctgttatgatcagtgccattgagaaacagaaattg
gtgtatattttgaatagagatgctgcagcccggcttaccatctcctctcctctggaggcc
cacaaagcgaacaccttagtgtatcatgtggttggagtagacgtgggatttgaaaatcca
atgtttgcttgtcttgaaatggattatgaggaagctgacaatgatccaacgggtgaagca
gccgctaatactcagcagacccttactttctatgagctagacctcggtttaaaccacgtg
gttcgaaaatacagtgaacctttggaggaacacggcaacttccttattacagttccaggc
gggtcagatggtccaagtggcgtgctgatctgctctgaaaactatatcacctacaagaac
tttggtgaccaaccagacatccgttgtccaattcccaggagacggaacgacctggatgac
cctgagagaggaatgatttttgtctgctctgccacccataagaccaaatcaatgttcttc
tttttagcccaaactgagcagggagatatcttcaagatcactttggagacagatgaagat
atggttactgaaatccgactcaagtattttgataccgtgcctgttgctgctgccatgtgt
gtgcttaaaactggcttcctctttgtggcatcagaatttggaaaccattacttgtatcaa
atcgcacatcttggagacgatgatgaagagcctgagttttcatctgctatgcctctggaa
gagggagacacattcttcttccagccaagaccactcaaaaaccttgttctggtggatgaa
ctggacagcctctctcccattctgttttgccagatagctgacctggccaatgaagacact
ccacagttgtatgtggcttgtggtagaggacctcggtcatccctgcgagtcttgagacat
ggacttgaggtgtcggaaatggccgtttctgagctacctggtaaccctaatgctgtgtgg
acagtgcgtcggcacattgaagatgagtttgatgcctacatcatcgtgtctttcgtgaat
gccacccttgtgttgtccattggagagactgtagaagaagtgactgattctgggttcctt
ggcaccacccccaccttatcctgttccttgttaggagatgatgccctggtgcaggtctat
ccagatggtatccggcacatacgagcagataagagagtcaatgagtggaagactcctggc
aagaaaacgattgtgaaatgtgcagtgaaccagcggcaagtggtgatcgccctgacagga
ggagagctggtctactttgagatggatccctctggacagctgaatgagtacacagagcgg
aaagagatgtcagcagacgtggtgtgcatgagcctggccaatgtgccccccggagagcag
cggtctcgattcctggctgtggggctggtggacaacactgtccgaatcatctccctggac
ccctcggactgtttgcagcctctgagcatgcaggctctcccagcccagccggaatccttg
tgcatcgtggagatgggtgggactgagaagcaggatgagctgggtgagaggggctctatt
ggtttcctctacctgaatattgggctacagaacggtgtgctgctgagaactgttctggac
cctgtcactggtgatctctctgacactcgaaccagatacctggggtcccgccctgtgaag
ctgttccgagtccggatgcaaggccaggaggcggtattagccatgtcaagccggtcttgg
ctgagctattcctaccagtctcgcttccatctcacacccctgtcctacgagaccctggaa
tttgcatctggcttcgcttctgaacagtgtcctgagggcatcgtggccatctccacaaac
accctgaggattttggctctggagaagctgggtgctgtcttcaatcaagtcgcctttcca
ctgcagtacacacctaggaagtttgtcatccaccctgagagcaacaaccttatcatcatc
gagacggaccacaatgcgtacacggaggccacaaaagctcagagaaagcagcagatggca
gaggaaatggtcgaggcggccggggaggacgagcgggagctggcggcagagatggctgct
gcgttcctcaatgaaaacctccctgagtccatttttggcgctcccaaggctggcaacggc
cagtgggcctctgtgatccgagtcatgaatcctattcaggggaacacactggaccttgtc
cagctggaacagaatgaggcagcatttagtgttgctgtgtgtaggttctccaatactggg
gaggactggtatgtgctggttggtgtggccaaggacctgatcctgaacccccgatccgtg
gctgggggctttgtctatacctacaagctcgtgaacagtggcgagaaactggagtttttg
cacaagactccagttgaagaggtccctgctgccattgccccatttcaggggcgggttttg
attggtgtggggaagcttctacgagtctatgacttggggaagaagaagttgcttcgaaag
tgcgagaataagcacattgccaattacatctcagggatccagaccattgggcacagggta
attgtgtctgacgtccaagaaagtttcatctgggtccgctacaagcgcaatgaaaaccag
ctcatcatttttgctgacgacacctacccccggtgggtcactacagctagcctcctcgac
tacgacactgtggctggtgcagacaagtttggcaacatttgtgtggtgaggctcccacct
aacaccaatgatgaagtggatgaggatcctacaggaaacaaagccctgtgggacagaggc
ttgctcaacggagcctcacagaaggccgaggtgatcatgaactaccacgtgggggagacc
gtgctatcgctacagaagactacgctgatccctggaggctctgaatcccttgtctatacc
accctgtcaggaggaattggcatccttgtcccattcacctcccatgaggatcatgacttc
tttcagcatgtggagatgcacctcaggtctgagcatccccctttgtgtgggcgggaccac
ctcagcttccggtcctattactttcccgtgaagaatgtgattgatggagacctctgtgag
cagttcaactccatggagcccaacaaacaaaagaatgtctcagaggaactggaccgaacc
ccacccgaggtgtccaagaagctcgaggacatccggacccgttatgccttctga
DBGET
integrated database retrieval system
