Echinops telfairi (small Madagascar hedgehog): 101647788
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Entry
101647788 CDS
T08707
Symbol
SLIT3
Name
(RefSeq) slit homolog 3 protein
KO
K06850
slit 3
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101647788 (SLIT3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
etf00536
]
101647788 (SLIT3)
Glycosaminoglycan binding proteins [BR:
etf00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101647788 (SLIT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
EGF
LRRNT
Laminin_G_2
hEGF
LRR_9
Laminin_G_1
EGF_TEN
LRRCT
LRR_14
JAG1-like_EGF2
LRR_EndoS
EGF_DL_JAG
EGF_Teneurin
LRR_NXF1-5
EGF_3
EGF_CA
Laminin_G_3
cEGF
Motif
Other DBs
NCBI-GeneID:
101647788
NCBI-ProteinID:
XP_004697180
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
AAVRARLALALALVSVLNGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLD
RNNITRISKADFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLF
QSTPKLTRLDLSENQIQGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLN
NNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLR
GFNVADVQKKEYVCPGPHSEAPSCNAHSLSCPSACTCSNNIVDCRGKGLTEIPANLPEGI
VEIRLEQNAVRFIPAGAFTQYKKLKRIDISKNQVSDIAPDAFQGLKSLTSLVLYGNKITE
IAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLHSI
QTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSE
DYRSRFSSECFMDLACPDKCRCEGTIVDCANQKLARIPSHLPEYVTDLRLNDNDISILEA
TGIFKKLPNLRKINLSNNKIKEVREGAFDGAAGVQELMLTGNQLDIVHGRMFRGLSGLKT
LMLRSNLLSCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNC
HLAWLGKWLRKRRVVSGNPRCQKPFFLKEIPIQDVAIQDFFSAGNDESSCQLGPRCPEQC
TCIDTVVRCSNKGLRTLPKGIPKDVTELYLEGNHLAAVPRELSALRHLTLIDLSNNSIGV
LTNYTFSNMSHLSTLILSYNRLRCIPMHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSL
SHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKGPV
DINIVAKCNACLSSPCKNNGTCSQDPVELYRCACPYGYKGKDCSMPIHTCIQNPCQHGGT
CHLSETLKDGFSCSCPLGFEGQRCEINPDDCEDNDCENNATCVDGINNSVCNCCPHLSGE
LCDEVIDHCVPEMNLCQHEAKCISLDRGFRCECLPGYSGKLCETDNDECAAHKCRHGAQC
VDAVNGYTCACPQGFSGLFCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQEPTCRCPPGF
AGPRCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGILLYKGDNDPLALELY
QGHVRLVYDSLNSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQP
AMGTSSPLYLGGIPTSTGLSALRQGGDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVS
PGCKSCSVCKHGLCRAVEKDSIVCECHPGWAGPLCDQEAWDPCLGHSCSHGKCVAAGTSY
VCNCAEGYGGAFCDHKNGSTGACSAFKCLHGQCHISERGEPSCLCQPGFSGEHCEQENPC
LGEVVREVIRRQKGYASCATASKVPIMECRGGCGPQCCQPTRSKRRKYVFQCTDGSSFVE
EVERHLECGCRPCS
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
gccgcggtgcgcgcccgcctagcgctggccttggcgctggtgagcgtcctgaacggcccc
cctgctgccgcctgccccaccaagtgtacctgctccgcagccagcgtggactgccacggg
ctgggcctccgggcggttccccggggcatcccccgcaacgccgagcgcctcgacctagac
agaaacaatatcaccaggatctccaaggcggacttcgccggactgaagaatctgcgagtc
ttgcatctggaagacaaccaggtcagtgtcatcgagagaggcgccttccaggatctgaag
cagctggagcgactgcgcctgaacaagaataagctccaggtccttccagaattgctcttc
cagagcaccccgaagctcaccagactagacctgagcgaaaaccagatccaggggatcccc
aggaaggccttccgcggcatcgctgatgtgaagaacctgcaactggacaacaaccacatc
agctgcattgaagatggagccttccgggcgctgcgcgatttggagatccttaccctcaac
aacaacaacatcagccgcatcctggtcaccagcttcaaccacatgccgaagatccggacg
ctgcgtctccactccaatcacctgtactgtgactgccacctggcttggctctctgattgg
ctgcggcagcggcggacaatcggccagttcacactctgcatggctcctgtgcacttgagg
ggcttcaatgtggccgacgtgcagaagaaggagtacgtatgcccaggcccccattccgag
gctccgtcctgcaatgcccactccctctcctgcccttcagcctgcacctgcagtaacaac
atcgtggactgccggggaaagggcttgacggagatccctgccaacctgccagagggcatc
gttgaaatacgcctggagcagaacgccgtcaggttcatccctgcaggagccttcacccag
tacaagaagctgaagcgaatagacatcagcaagaatcaggtctcggacatcgctccggat
gccttccagggcctgaagtcgctcacatccctggtgctctatggaaacaagatcacggag
attgccaaaggactgtttgacgggctggtgtccctgcagctgcttctcctcaacgccaac
aagatcaactgcctgcgggtgaacacgtttcaggacctgcagaacctcaacctgctctcc
ctgtacgacaacaagctgcagaccatcagcaaggggctctttgcacccctgcactccatc
cagacgctccacttagcccaaaacccctttgtgtgtgactgccacttgaagtggctggcc
gactacctgcaggacaaccccatcgagaccagtggggcccgctgcagcagcccacggcgg
ctcgccaacaagcgcatcagccagatcaagagcaagaagttccgctgctcaggctcagag
gattaccgcagcaggttcagcagtgagtgcttcatggacctcgcgtgcccggacaagtgc
cgctgtgagggcaccatcgtggactgcgccaaccagaagctggcccgcatcccaagccac
ctcccggagtacgtcaccgatctgagactgaacgacaacgatatatccatcctagaggcc
actgggatcttcaagaagctgcccaatctgcggaaaataaacctcagtaacaacaagatc
aaggaggtgcgagagggtgcctttgacggtgcggccggcgtgcaggagctgatgctgacg
ggaaaccagctggacattgtgcacggacgcatgttccgtggcctcagtggcctcaagacc
ctgatgctgcggagcaacctgctcagctgtgtgagcaacgacacctttgctggcctgagc
tcagtgcggctgctctccctctatgacaaccgcatcaccaccatcacccccggagccttc
accacgctcgtctccctgtccacgataaacctcctgtccaaccccttcaactgcaactgc
cacctggcctggcttggcaagtggctgaggaagaggcgggtcgtcagtgggaacccccgg
tgccagaagcctttcttcctcaaggagattcccatccaggatgtggccatccaggacttt
ttctccgcaggcaatgatgagagcagctgccagctgggcccccgctgcccggagcagtgc
acctgcatagacacagtggtgcgatgcagcaacaagggactccgaacactccccaagggc
atccccaaggacgtaaccgagctgtacctggaaggaaaccacttggcggccgtgcccagg
gagctgtctgctcttcgacatctgacactgattgacctgagcaacaacagtatcggcgtg
ctgaccaattacaccttcagtaacatgtcgcatctctccactctgatcctgagctacaac
cggctgaggtgcatccccatgcacgccttcaacggtctgcgctctctccgtgtgctaacc
ctccatggcaacgacatttccagtgtccccgagggctcctttaatgacctgacatctctc
tcccatctggcgctggggaccaacccgctccactgtgactgcagcctgcgctggctgtcg
gagtgggtgaaggcgggctacaaggaacctggcatcgcccgctgcagtagcccagagccc
atggctgacagactcctgctcaccacccccactcaccgcttccagtgcaaaggtccagtg
gacatcaacattgtggccaagtgcaatgcctgcctctccagtccatgcaagaacaacggc
acgtgcagccaggacccagtggagctgtatcgctgtgcctgtccctatggctacaagggc
aaggactgcagcatgcccatccatacctgcattcagaacccctgccaacacggaggcacc
tgccacctgagcgagaccctcaaggatggcttcagctgctcctgccccctgggctttgag
ggccagcggtgtgagatcaacccagacgactgtgaggacaatgactgcgaaaacaatgcc
acctgtgtggatggcatcaacaactctgtctgcaactgctgccctcacctctctggggag
ctgtgcgacgaagtgattgaccactgtgtgcccgagatgaacctctgtcagcacgaggcc
aagtgcatctccctggacagaggattcagatgtgaatgcctccctggctacagtggcaag
ctctgtgagacggataacgacgagtgtgcggcccacaagtgtcgccatggtgcccagtgt
gtggacgcggtcaacggctacacctgtgcctgcccccagggcttcagcgggctcttctgt
gagcacccaccgcccatggtcctgctgcagaccagcccctgtgaccagtacgagtgccaa
aatggggcgcagtgcatcgtggtgcaacaggagcccacctgccgctgcccgccgggcttc
gctgggccccgctgcgagaagctcatcaccgtcaactttgtgggcaaggactcctacgtg
gaactggcctccgccaaggtccggccccaagctaacatctccctgcaggtggccactgac
aaggacaacggcatcctactctacaaaggcgacaatgaccccctggcgctggagctgtac
caggggcacgtgcggctggtctacgacagcctgaactccccgcccaccaccgtgtacagt
gtggagaccgtgaatgatgggcagttccacagtgtggagttggtgatgctgaaccaaacc
ctgaacctcgtggtggataagggcgcccccaagagtctggggaagctccagaagcagcca
gcaatgggcaccagcagtcccctctaccttggaggtatccccacctccaccggcctctcg
gccctgcgccagggcggggaccggcccctggggggcttccatggctgcatccacgaggtg
cgcatcaacaacgagctgcaggacttcaaggccctccccccgcagtcactgggggtgtca
ccaggctgcaagtcgtgctccgtgtgcaaacacggcctgtgccgcgcggtggagaaggac
agcatcgtgtgtgagtgccacccaggctgggctggcccgctctgcgaccaggaggcctgg
gacccctgccttggccacagctgcagccacggaaaatgtgtggcagccggcacctcctat
gtgtgcaactgtgccgagggctatggaggggccttctgcgaccacaagaatggctctacc
ggtgcctgctccgccttcaagtgtctgcacgggcagtgccacatatcggagcgaggggag
ccctcctgcctttgccagcccggcttcagtggcgagcactgcgaacaagagaacccgtgc
ctgggggaggtggtccgcgaggtgatccgccgccagaaaggctacgcgtcctgcgccaca
gcctccaaggtgcccatcatggaatgccgcgggggctgcgggccccagtgctgccagccc
acccgcagcaagcggcggaagtacgtcttccagtgcacggacggctcctcattcgtggag
gaggtggagagacacttggagtgcggctgccgcccgtgctcctaa
DBGET
integrated database retrieval system
