Echinops telfairi (small Madagascar hedgehog): 101648043
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Entry
101648043 CDS
T08707
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101648043 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101648043 (TRIM71)
04121 Ubiquitin system [BR:
etf04121
]
101648043 (TRIM71)
Enzymes [BR:
etf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101648043 (TRIM71)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101648043 (TRIM71)
Ubiquitin system [BR:
etf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101648043 (TRIM71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
TEN_NHL
zf-B_box
Beta-prop_IFT122_1st
CRLF3_N
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
101648043
NCBI-ProteinID:
XP_012860477
UniProt:
A0ABM0ZQR0
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MPLLISSLSAKKGVVVLHLYCDTCSVPICRECTMGRHGGHSFIYLQEALQDSRAITIQLL
ADAQQGRQAIQLSIEQAQAVAEQVEIKAKVVQSEVKAVTARHKKALEERECELLWKVEKI
RQVKAKSLYLQVEKLRQNLNKLESTISAVQQVLEEGRALDILLARDRMLAQVQELKTVRS
FLQPQEDDRVMFTPPDQALYLAIKSFGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIG
YDHDGEPRLSGGDLMSAVVLGPDGNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTMCNQ
HIENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNR
IQVFKPCGAFHHKFGALGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK
FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFAPDGVFLNKYGFEGALWKHFDS
PRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIV
VADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgctcatctcctccctctccgccaaaaagggggtggtggtgctgcacctgtac
tgcgacacttgctcagtgcccatctgtcgggagtgcaccatgggtcgccacggaggccac
agcttcatctacctccaggaggcgctgcaggactctcgagcgatcaccatccagctgctg
gctgatgcccagcagggccgccaggcaatccagctgagcatcgagcaggcccaggccgtg
gcagaacaggtggagataaaggccaaggtggtgcagtcggaggtcaaagccgtgacggcg
aggcacaagaaggctctggaggagcgggagtgcgagctgctgtggaaggtagagaagatc
cgccaggtgaaagccaagtctctgtacctgcaggtggagaagctgcggcagaacctcaac
aagctggagagtactatcagtgcggtccagcaggtcctggaggagggccgggcgctggac
atcctgctggcccgagaccgcatgctggcccaggtgcaggagctgaagacagtgcggagt
ttcctgcagccccaggaagacgaccgcgtcatgttcacgccccctgaccaggccctctac
ctcgccatcaagtcctttggctttgtcagcagtggggcttttgcaccgctcaccaaggcc
acaggggagggcctcaagcgggccctccagggtaaggtggcctccttcacggtcatcggc
tacgaccacgacggggagccccgtctctctgggggtgacctgatgtccgctgtggtcctg
ggccccgatggcaatcttttcggggcagaggtgagcgatcagcagaatgggacatacgtg
gtgagctaccggccccagctggagggggagcacctggtgtccgtcaccatgtgcaaccag
cacatcgaaaacagccccttcaaggtggtggtcaagtcaggccgcagctacgtgggcatt
gggcttccgggcctgagtttcggcagcgagggcgacagcgatggcaagctctgccgccca
tggggtgtgagtgtggacaaggagggctacatcgtcgtcgctgaccgcagcaacaaccgc
atccaggtattcaagccctgtggtgccttccaccacaagtttggtgccctgggctcacgg
cccgggcagtttgaccggccggctggggtggcctgtgacgcctcacgtaggatcgtggtg
gccgacaaggacaatcatcgcatccagatcttcaccttcgagggtcagttcctcctcaag
ttcggtgagaaaggaaccaagaacgggcagttcaactacccttgggatgtggcggtgaac
tccgagggcaagatcctggtctcagacactcggaaccaccggatccagctgttcgcgcct
gacggcgttttcctgaataaatatggcttcgagggggctctctggaagcactttgactcc
ccccgaggggtggccttcaaccacgagggccacttggtggtcactgacttcaacaaccat
cgcctccttgtcatccaccccgactgccagtctgcacgcttcctgggctcggaggggacg
ggcaatgggcagttcctgcgcccgcagggcgtggctgtagaccaggaagggcgcatcgtc
gtggccgactccaggaaccaccgcgtgcagatgttcgagtccaacggcagcttcctgtgc
aagtttggcgcccagggcagtggcttcgggcagatggaccgcccctccggcatcgccgtc
acccctgacgggatgatcgtcgtggtggacttcggcaacaatcggatcctcgtcttctaa
DBGET
integrated database retrieval system
