Echinops telfairi (small Madagascar hedgehog): 101648085
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Entry
101648085 CDS
T08707
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etf03021
]
101648085 (CTR9)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
101648085 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_16
TPR_12
TPR_17
TPR_10
TPR_7
TPR_6
TPR_11
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
101648085
NCBI-ProteinID:
XP_004711590
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQKKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELTSTCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYGIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGVGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKFLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEAAKE
KKRGGGGGRRSKKGEFDEFVNDDTDEDLPVSKKKRRRKGSGSEQEGEEEESGERKKKKRK
RPAKGEEGSDDDDTENGPRQKKRRPPKAEKKRAPKPERLPPSMKGKIKSKAIISSSDDSS
DEDKLKIADEGHPRHSNSDSDEGQRRKKRASSESESDENQTQSGSEAGSPRRPRRERSDE
DSDSDQPSRKRRLSGSEQSDNESVQSGRSRSAGSENDSRPASPSVESDRDSERGSDNEGS
VRASGNESEPEGSNNEASDRGSEHGSDDSD
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccattgagattcccctccgggacactgacgaggttattgaacttgac
ttcgatcagttacctgagggggatgaagttatcagtattctaaaacaggagcacacacaa
ctgcacatatggatcgcgctggcgctggaatactacaagcaaaaaaaaacagaagaattt
gtaaagctgttggaagcagctcgtatagatggcaatttggactacagagatcatgaaaaa
gaccaaatgacgtgcttggatacattggcggcctactatgttcaacaggctcgaaaggaa
aagaataaggacaataagaaggatctgattacacaggcaaccttgttgtacacaatggct
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgcttactt
gaaggtgacaaaatggatcaagctgatgcacagtttcattttgtactaaaccagtctcca
aataatattccagctcttcttggtaaagcttgcatttcattcaacaagaaagattacaga
ggagcacttgcgtactataagaaagcacttcgtactaacccaggatgtcccgcggaagtt
cgcttaggaatgggccattgctttgtgaagcttaacaagctagagaaagctcgtttggca
ttcagcagagccttggaactcacttccacttgtgtgggagcattggttggactggctgtt
ctagaactcaacaataaagaggctgattccatcaaaaatggtgtccagcttctttccaga
gcctatggaattgatcctagcaaccctatggtattgaaccacttagcaaaccatttcttc
tttaaaaaggattatagtaaagtccagcacttggctctccatgcgttccataacacagaa
gtagaggctatgcaggcagaaagttgctaccagctggctagatcattccacgttcaggaa
gattatgaccaagccttccagtactattatcaagccacacaatttgcctcctcctccttt
gtgctgccgttttttggtttgggacaaatgtatatttatcgaggtgacaaagaaaatgca
tctcagtgctttgaaaaagttttgaaagcttatcctaataattatgaaactatgaaaatt
cttggctctctctatgctgcctcagaagatcaagagaaacgggatatcgccaagggccac
ttgaagaaggtcacagaacagtatcctgatgatgttgaagcttggattgaattggcacaa
atcttagaacagactgatatacagggtgctctttcagcttacggaacagcgacgagaatc
cttcaggagaaagtacaggccgatgtccccccagagattctgaacaacgtgggagctctc
cattttagacttggaaacctaggggaagcaaagaaatattttttggcatcattggatcgt
gcaaaggcagaggctgaacatgatgaacattattataacgctatttctgttacaacatca
tacaatttggccagactgtatgaggcgatgtgtgaattccatgaagcagaaaaattatat
aaaaacatcttacgggagcatcctaattatgttgactgctatttacgtctaggagccatg
gccagagacaaagggaacttttatgaggcttccgattggtttaaggaagctcttcagatt
aatcaggatcatccagatgcttggtctttgattggtaatcttcatttggctaaacaagaa
tggggcccaggacagaagaaatttgagaggatattaaaacaaccatctactcagagtgac
acgtactcgatgctggccctcggcaatgtgtggctccagactttacatcagcctacccga
gaccgagaaaaagagaagcgtcaccaagatcgtgctctggccatctacaagcaagtactc
aggaacgacgccaagaacctgtacgcggccaatggcgttggagccgtgttagcccacaaa
ggctatttccgtgaagctcgtgacgtgttcgcccaagtgagagaagcgactgcagacatc
agtgatgtgtggttgaacttagcacacatctatgtggagcagaagcagtatatcagtgcc
gttcagatgtatgaaaactgtctccgaaagttctataagcaccagaacactgaagtcgtg
ctctatttggcccgagccctcttcaagtgtggcaagttacaagaatgcaaacagactttg
ctgaaggctagacatgtggctcccagtgataccgttctgatgtttaatgtggccctagtg
ctgcaaagattagctacctcggtcctgaaagatgaaaagagtaatctgaaggaagtgctt
aacgctgtgaaagagttggagcttgcacatagatacttcagttacttgagtaaagtggga
gataaaatgagatttgatttggcccttgctgctaccgaagccaggcagtgctccgactta
ctgagccaggcccagtaccacgtggcccgggcacggaagcaagacgaagaagagcgggaa
ctgcgggccaaacaagagcaagaaaaagagctgttgaggcagaaatttcttaaagaacag
gaagagaaacgtctccgagaaaaggaagagcagaagaaacttctggagcagcgggcccag
tatgtggagaaaacaaaaaatattctcatgttcactggtgagactgaagcagcaaaagag
aaaaagcgaggtggtggaggaggacggcgttctaagaaaggcgagtttgatgagtttgtc
aatgacgacactgatgaagacctgcccgtgtccaaaaagaagaggaggaggaagggcagt
ggcagtgaacaagaaggtgaagaggaggagagtggtgagaggaagaagaagaagaggaaa
aggcctgcaaagggagaagaagggtctgatgacgatgatacagaaaatggcccgagacag
aaaaaacgccgcccaccaaaagcagagaagaaacgggcgcccaagccagaacgtctgcct
ccttcaatgaagggaaaaataaaatccaaagccataatatcgtcaagcgatgattcttcg
gatgaggataaacttaaaattgctgatgaaggtcatcccagacatagcaacagcgactcc
gatgaaggccagcggcggaagaaacgtgcctcgtcggagagcgagtcggatgagaaccag
actcagtctggcagcgaggccggcagtcctcggaggccccgccgagagcggtccgatgag
gactcagacagtgaccagccatcccggaagagaaggctctcgggctcggaacagtctgac
aacgagtctgtgcagtcgggaagaagccgctcagcgggctcggagaatgactcgcgccca
gcttctccgagcgtggagtccgatagagattctgagagaggatctgataatgagggttct
gtccgagcctcggggaatgaatccgaaccagagggatccaacaatgaggcttcagatcgt
ggctcagaacatgggtcagatgatagcgactag
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integrated database retrieval system
