Echinops telfairi (small Madagascar hedgehog): 101648207
Help
Entry
101648207 CDS
T08707
Symbol
TRPA1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
101648207 (TRPA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etf04040
]
101648207 (TRPA1)
Ion channels [BR:
etf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101648207 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
ANK_LRRK2
Ion_trans
Acetate_kinase
SchA_CurD
Motif
Other DBs
NCBI-GeneID:
101648207
NCBI-ProteinID:
XP_045146169
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MKISLSTKVGDKQAKVTFGKSACRLQSFLKKRCRSRGYDDTDASPLHHAAEAGELELMEM
ILNESCCEELNVMDNYGNTPLYWATDKNQVKSIQFLLSRGANPNIRNYNMMAPLHIAVQR
GYNELVKVLVEHGSTNINLEGENGNTAVMFACSKDNSEALQFLLNKGAKPCIQNKWGCFP
IHQAAFSGAKKCMEIILKFGEDHGHSRNNHINFVNNGKHSPLHMAVQSGDLEMIKMCLDN
GAQIELMENGKCTALHFAATQGATEIVKLMIASYSGDSDIVNAVDGNQETLLHRASLFDH
HELAEYLISVGADINSIDCEGRSPLLLATASASWNIVNLLLSKGAHVDIKDFLGRNFLHL
TVQQSHGLKNLQPEFMQMKHIKELVMDEDNNGCTPLHYACRQGVPVSVNNLLHFNVSINS
KSKDKKSPLHFAASYGRINTCQRLLQDISDMRLLNEGDLHGMTPLHLAAKNGHDKVVHLL
LKKGALFLSDHYGWTALHHASMGGYTQTMKVILNTNLKCTDRLDEEGNTALHFAAREGHA
KAVALLLSCGADIVLNKQDASFLHVAIHNKRKDVVLTAIRSQRWEECFKVFSHRSQSNKC
PVMEMVEYLPECMKVLLDLCMLHSTEDKSCRDYHIEYNFKYLQCPLEFTQTVRPEKDVTY
EPLATLNAMVQHNRIELLNHPVCKEYLCMKWLAYGFKAHIVNLGSYCLGLMPMTFLVVNI
KPGMGFNSTGIINGTSDHSEILDTQNSYPIKVCMILVFLSSILGYCKEVSQIFQQKMSYF
WDHSNGVEWIIYTTSLIFVLPLFTGVPAYIQWQCAAIAIFFYWMNFLLYLQRXNQLESRL
QLLHILLSFYIFFXYXFLNVVFHFYIVVFSXDAFSHPLLSIIQTFSMMLGDINYRDSFLE
PFLRDELAYPLLSFIQLITFTLFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVKLHT
SLEKKLPLCFLQKVDQESIIVYPNRPRYDGGVICLFQYIFSIKETGQEAPNVDTSLETEI
LKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETEDEDSHSSFQDKFKKEQLEQRNSKWN
CLLKAVKSQGS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgaagataagcctttcaaccaaagttggagacaaacaagctaaggtgacttttggtaaa
agtgcatgtagattacagagcttcctcaaaaaacggtgcagatcccgtggatatgatgac
acggatgcctctcctttgcatcatgctgcagaagcaggtgaactagaactgatggagatg
atcctcaatgagtcctgttgtgaagagctgaatgtgatggataattatggaaataccccc
ctgtactgggctacagacaaaaaccaggtcaaaagcatccaatttcttctcagccgagga
gcaaaccccaacatccgaaactacaacatgatggcccctctccacatagctgtgcagcgt
gggtacaacgagttggtgaaggtcttggttgagcatggaagtacaaatatcaacttggaa
ggagaaaatggaaacactgctgtgatgtttgcgtgctccaaagataatagtgaagcacta
caatttttgttaaacaaaggagctaagccatgcatccaaaataagtggggatgcttccct
atacaccaggctgccttttccggtgccaaaaagtgcatggaaataattttaaagtttggt
gaagatcatggacatagcagaaataatcatattaactttgtcaataatgggaaacatagc
cctctccacatggctgttcagagcggcgacttggaaatgatcaaaatgtgcctggataat
ggtgcacagatagagttaatggagaacgggaagtgcacagcccttcattttgctgccacg
cagggagccacggagattgttaaattgatgatagcctcctattccggtgacagcgatatt
gtgaacgcagtggatggaaaccaggagacactgctgcacagagcgtcactatttgatcat
catgaacttgcagaatatttaatttcagtgggtgcagatatcaatagcattgattgtgaa
ggacgttctccacttttattagcaactgcttctgcatcttggaatattgtgaatttgcta
ctctctaaaggtgcccatgtagacataaaggattttcttggacgtaattttttgcatttg
actgtacaacaaagtcatggattgaaaaatttgcaacctgagtttatgcagatgaaacat
attaaagagctggtcatggatgaagacaacaacggctgtactcctctacattatgcatgc
agacagggggtgcctgtctctgtgaataacttacttcattttaatgtgtccattaattct
aaaagcaaagataagaaatcaccgctgcactttgcagccagttatgggcgtatcaatacc
tgtcagaggcttctacaagacatatctgacatgaggcttttgaatgaaggtgatctccat
ggcatgacacctctccatttggcagcaaaaaatggacacgataaagttgttcaccttcta
ctgaaaaaaggtgcattatttctcagtgaccactatggctggactgctttgcatcatgcg
tccatgggtgggtacactcagaccatgaaggtcattctgaacaccaatctgaagtgcaca
gatcggctggatgaagaagggaacaccgcgctccacttcgcggccagggaaggccatgcc
aaggccgtggcacttcttctgagctgcggtgctgacatcgtcctgaacaagcaggatgcc
tccttcttgcacgtggctatccacaacaagaggaaggacgtcgttctgaccgcaatcagg
agccaaaggtgggaagaatgttttaaagtatttagtcatcgttctcaaagcaataaatgt
cctgtcatggaaatggtggaatacctccctgaatgcatgaaagttcttctagatctgtgc
atgcttcactccacagaggacaagtcatgccgagactaccacattgagtataatttcaag
tatcttcaatgtccactagagttcacccaaacagtgaggcctgaaaaggatgtaacatat
gaacctctggcaacgctcaatgcaatggtacagcataatcgcatagagcttctcaatcat
cctgtctgtaaggaatatttatgtatgaaatggctagcctatggatttaaagcccacatt
gtgaacctgggatcatactgtctgggtctcatgcctatgaccttcctcgtggtcaatata
aagccaggaatgggtttcaactcaactggaatcattaatggaacaagtgaccactcagaa
atactagacacccagaattcataccctataaaagtgtgtatgatattggtttttttatca
agcatacttggatattgcaaagaagtttcccagatcttccaacagaaaatgagttacttt
tgggatcacagtaatggagtggaatggattatctatacaaccagcctcatttttgtgttg
cccttgttcaccggtgtaccagcttacatacagtggcagtgcgcagcaattgctatattc
ttctattggatgaacttcttattgtatctgcagaggtaaaatcagcttgaatcacgtcta
cagcttttacatattcttttaagcttttacatattcttttaatatnnntttttaaatgtt
gtgtttcatttttacattgtggtcttttcttaggatgccttcagccacccactgctttcc
atcatccagaccttcagcatgatgcttggagatatcaattatcgggattcctttctagaa
cccttcttgagggatgagttggcatatccactcctgtcctttatacaacttattacattc
acattgtttgttccaattgtcctcatgaacttactgattggtctggcagttggggacatt
gccgaggtacaaaaacatgcatcactgaagaggatcgctatgcaggtgaaactccacacc
agcttagagaagaaactgccactctgcttcctacaaaaagtggatcaagagagcatcatc
gtgtaccccaacagacccagatatgacgggggagtgatatgtttatttcaatatatcttc
tccatcaaagaaacaggacaagaagcaccaaatgttgatacatctttagaaacagaaata
ttgaagcaaaaataccggctgaaagacctcacgtctcttctggaaaaacagcacgagctc
attaagctcatcattcagaagatggagatcatctctgagacagaggatgaagacagccac
agctcttttcaagacaagttcaaaaaagagcagctcgagcaaaggaacagcaaatggaac
tgtctgctgaaggccgtaaagtcacagggctcttag
DBGET
integrated database retrieval system
