Echinops telfairi (small Madagascar hedgehog): 101648549
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Entry
101648549 CDS
T08707
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03008
Ribosome biogenesis in eukaryotes
etf03013
Nucleocytoplasmic transport
etf03015
mRNA surveillance pathway
etf05014
Amyotrophic lateral sclerosis
etf05164
Influenza A
etf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101648549
03015 mRNA surveillance pathway
101648549
03008 Ribosome biogenesis in eukaryotes
101648549
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101648549
05168 Herpes simplex virus 1 infection
101648549
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101648549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101648549
03009 Ribosome biogenesis [BR:
etf03009
]
101648549
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101648549
mRNA cycle factors
Stress granule specific factors
101648549
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101648549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
NTF2
LRR_8
LRR_9
LRR_4
Motif
Other DBs
NCBI-GeneID:
101648549
NCBI-ProteinID:
XP_045146515
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MVGEEQKEDSPQWFKVAITDGRKYKKPWLLSSIQSHCSVPFTPIDFHYVGLRAQFFISDA
SIASALKDVSDKILDDNSQKISIVVSPTIVPNCERNKLKPEKMEQLKVAMKKRYLASHQA
LDLQSFRFDPILVDHGIDMILNRKSCMDAALTIIEEDFPELLSLNLRNNKLYRLDSLSNI
VEMAPKLQILNLSKNELKSAWELDKIKGLNLKELWLKGNPLCRNYSNNSTYVSTLLELFP
KLTRLDGLELFSTLSCGNGKKKLPVCKGSVYGSDTLKSLIWQFLTEYYYIYDHGDRHVLL
NTYHDNACFSLTVPFNSDDGVLGSLNLYSKSSRNMIKIKDSVPRTQLLKYTKTEIVDFLS
ALPKTQHDLSSFVVDTCVQTENMFYFSVNGQFKEVETSYLPHNCDFTRIFILNRTSNSSL
CIVNDQLFVKDIRFDEPKTDLLIGHIIL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagaggagcaaaaggaagattctccacagtggttcaaggttgcaattactgat
ggaagaaagtataagaagccttggctactgagttctatccagagccattgcagtgttccc
tttaccccaattgacttccactacgtgggattgcgggcccagttctttatcagtgatgcc
agtattgcctctgcactgaaggatgtcagcgacaagattcttgatgacaatagccaaaag
ataagtattgttgtcagtcccactatcgtacccaattgtgagcggaataagttgaagcca
gaaaaaatggagcagctaaaggtggccatgaagaagcgataccttgcctctcaccaagct
cttgacctccagagcttccgctttgacccaatcttggtggatcatggtattgacatgatc
ctgaatcgaaaaagctgcatggatgctgctttgacaatcattgaagaggatttccctgag
ctattgtccttgaatttgcgtaacaacaagttgtaccggttggatagcctgtctaacatt
gtagagatggcccccaaactccagatcctgaacctctccaaaaatgagctgaagtcagca
tgggagttggacaagataaaaggactgaatctcaaagagttgtggctaaaaggaaatcca
ctatgtcgaaactactcaaataattctacctatgtgagcaccctcctggaactgttcccc
aagctgacacgcctggatggcctggagttgttctccactctatcctgtggaaatggaaaa
aagaagttaccagtctgcaaggggagcgtgtatggatcagacaccctgaagagtctaatc
tggcaattcctgacggaatattactacatctatgaccatggtgaccggcacgttcttctt
aatacataccatgacaatgcctgcttctcactgactgttcctttcaattctgatgacggc
gttctaggcagcttgaacctgtattccaagagtagcaggaatatgataaagattaaggac
tctgttcctcggactcagctgctgaaatacacaaaaacggagattgttgacttcctcagt
gcattgcccaagacccagcatgacctcagctccttcgtggtggacacctgtgtccagaca
gaaaacatgttctacttttctgtcaatgggcagttcaaggaggtggaaacaagttatctg
cctcataactgtgacttcacccggatcttcattttgaaccgtacaagcaattccagttta
tgcatcgtgaatgaccaactgtttgtgaaggacatccgcttcgacgagcccaagactgac
ttgctcattggtcacatcatactctag
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