Echinops telfairi (small Madagascar hedgehog): 101648794
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Entry
101648794 CDS
T08707
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etf03041
]
101648794 (DDX1)
03016 Transfer RNA biogenesis [BR:
etf03016
]
101648794 (DDX1)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101648794 (DDX1)
Spliceosome [BR:
etf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101648794 (DDX1)
Transfer RNA biogenesis [BR:
etf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
101648794 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
101648794
NCBI-ProteinID:
XP_004696103
UniProt:
A0ABM0IB53
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MTLFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREPKEWH
GCRATKGLVKGKHYYEVSCHDQGLCRVGWSTTQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHVKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFAALSKAPDSYITKSPHTGSAQVTQTKFLPNAPKALIIEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADRLWERLGKNHIRTDEVHAKDNTRPGAN
SSEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPLDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgactttattttcagagatgggtgttatgcctgaaattgcacaagctgtggaagagatg
gattggcttctccccactgatatccaggctgaatctatcccattgatccttggaggaggt
gatgtacttatggctgcagaaacaggaagtggaaaaacaggtgctttcagtattccagtt
attcagatagtttatgaaactctaaaagatcaacaggaaggcaagaaaggaaaaacaaca
attaagactggtgcttcagtgctcaacaaatggcagatgaacccatatgatagagggtca
gctttcgcaattggatctgatggtctttgttgtcagagcagggagccaaaggaatggcat
ggatgtagagcaactaaaggactggtgaaagggaaacactactacgaagtctcctgtcat
gaccaagggttatgcagagttgggtggtctaccacgcaggcttccttagacctgggtact
gacaagtttggctttggctttggtggaacaggaaagaaatcccataataaacagtttgat
aattatggagaggaattcactatgcatgataccattggatgctaccttgatatagataaa
ggacatgtcaagttttcgaaaaatggaaaagaccttggattagcatttgaaataccagca
catgtgaagaatcaagccctctttcctgcctgtgtcttgaagaatgcagaactaaaattc
aactttggtgaagaagaatttaagtttcccccaaaagatggttttgctgctctttccaag
gcaccggatagttacattacgaaatcaccgcacacaggcagtgcacaggtgacacaaaca
aagtttctccccaacgctccaaaagctctcatcattgagccctcccgagagttagctgag
caaactttgaataacgtcaagcagtttaagaaatacatcgataatcctaaattaagggag
cttctgataattggaggggttgcagcccgggatcagctttctgttttggataatggggtg
gatatagttgtcggcactcctggaagactagatgatttggtgtcaactggaaagctgaac
ttatctcaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggctat
tctgattttataaacaggatccataatcagattccccaaataacctctgatgggaaaaga
cttcaggtgattgtttgctctgctaccttgcattcttttgatgtaaagaaactgtccgag
aagataatgcactttcccacttgggtcgatttaaaaggagaagattctgttccagagact
gtacatcatgttgtcgtgcctgtgaatcccaaagctgacagactctgggagaggcttggc
aaaaaccacattagaactgatgaagttcatgcaaaggataataccagacctggtgctaat
agttcagaaatgtggtctgaagctattaagatcttgaagggagagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattatcttctgtagaaccaaaatcgactgtgat
aacttggagcagtattttatgcaacaaggaggaggacctgataaaaaagggcaccagttc
tcctgtgtttgtcttcatggtgacagaaagcctcatgagagaaagcaaaacttggaaaga
tttaagaaaggagatgtgagattcctgatttgcacagatgtggctgctagaggaattgat
atccatggtgttccttatgttatcaatgtcaccctgcctgatgaaaagcagaactatgta
catcggattggcagagtaggaagagccgaaaggatgggtctggccatttctctggtagca
acagaaaaagaaaaggtttggtaccatgtgtgtagcagccgtgggaaggggtgttataac
acgagactcaaggaagatggcggttgtactatatggtacaatgagatgcagttgctatcc
gaaatagaagaacacctgaactgtaccatttctcaggttgagccagatataaaagtacca
ctggatgaatttgatgggaaagttacctatggtcaaaaaagggctgctggtggtggaaac
tataaaggacatgtggacattttagcaccgaccgttcaagagttggctgcccttgaaaaa
gaggcgcagacatctttcctacatcttggctaccttcctaaccagctgttcagaaccttc
tga
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