Echinops telfairi (small Madagascar hedgehog): 101649160
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Entry
101649160 CDS
T08707
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etf03009
]
101649160 (RRP12)
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
90S particles
Other 90S particles
101649160 (RRP12)
Pre-60S particles
Other pre-60S particles
101649160 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
DUF6031
Motif
Other DBs
NCBI-GeneID:
101649160
NCBI-ProteinID:
XP_004701089
UniProt:
A0ABM0IJ14
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MGRSGKLRSGVSAKLKRWKKGHSSDSNPATCHHRQAARSRFFSQPSGKSHLTVDALKLHN
ELQSGSLRVGRDEAPETAMEDAELAVTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAAH
KEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVESPESLAAVAYLLNLVLRRVPSP
VLMKKFSDTSKAFMDILSAQASPGSSTSALRWVLSCLATLLRKQNLESWSYPVTLQVFHG
LLSFTVHAKPKVRKAAQHGVCMVLKGSEFMFGEKAPAHHPAAISTAQFCIQEIEKSGGSK
EATTTLHMLTLLKDLMASFPEGLVKSCSETFLRVMTLSHVLVTACAMQAFHSLFHARPGP
GTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQRDLGLGHLPRLFVT
AMTCLLSPYSQVVAAATQSLKEILTECVAPHMAAIGSVTASAPAPAQYVARMFRAVEEGL
TYKFHAAWGSVLQLLSVFFQACGRQAHPVMKKCLQSLCDLRLSPHFPHSAALDQAVGAAV
SSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVRETRLGFFTTYFLPLANTLKSK
ATELAQAGSTVESKIYDTLQWQIWTFLPGFCTRPTDVATAFKGLARTLGMAISERPDLRV
TVCQALRTLITKGCEAAADRAEVSRFAKNFLPILFNLYGQPVAPGDTPAPRRVMLETIKT
YLTITEPQLVNGFMEKASEKVLDPASSDFTRLSVLDLVVALAPHADEAAISKLYSTIRPY
LESKEHGVQKKAYRVLEEVCASPQGPCAQFVQSHLDDLKKTLLDSLRTTASPAKRPRLKC
LIHIVKQLSGEHEDFMAALIPEVILCTKEVSVGARKNAFALLVEMGHAFLRIGENQEEAL
QRFLVLIYPGLVGPVTTVSCTILALTHLLFEFKELMGTRLVAQLLESVCLLLASRTRDVV
KSALGFVKVVVAVMDGAHLAKHVQLVMDAIGKLSDDMRRHFRTKLRNLFTKFIRKFGFEL
VKGLLPEDYHKVLINIRKAEARARRHRSLSQAAMEEEEEEEEEEEEPAQGKGDSIEEILA
DSEDDEEEEEKPERSRGKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGLG
RGKKRDHGFKVSADGRLIIQEDDDGDQMEEEEGTKGEEEEVADLMEDVTVRSRKYQKLKQ
RQEAADEELEVPPQYRAGGSGIHRPLAKKARPGTEYKAKKAKGDVKKKGRLDPYAYIPLN
RTKLNRRKKVKLQGQFKGLVKAAQRGSQVGHKLRRKDRRP
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgctcggggaaattgcggtccggcgtctcggcgaagttgaagcgctggaagaaa
ggccacagcagcgacagcaaccccgccacttgccaccaccgccaggctgcccgcagccgc
ttcttcagccagccctcaggaaagagtcacctgaccgttgatgctctgaagctgcataat
gagctgcagtcagggtcgctgcgcgtgggcagagacgaagccccggagacggccatggaa
gacgcggagctggccgtcaccgagaagtcgtcgggcaccttcctgagcggcctctcggac
tgcacgaacgtcaccttcagcaaagtgcagcgcttctgggagtccaactctgcggcccac
aaggagatctgtgctgtcctggctgccgtcaccgaggtgatccgctcccagggagggaag
gagacggagaccgagtactttgcagctctgatgacaacgatggaggcagtggagtccccc
gagtctctggcggccgtggcttacctgctgaaccttgtcctcaggcgtgtgcccagcccg
gtcctcatgaagaagttctccgacacctccaaagccttcatggacatcctgtcagcccag
gccagccccggcagctccacctccgccctccgatgggtcctctcctgcctggccaccctg
ctgcggaagcagaacctggagtcctggagctacccggtgaccctgcaggtgttccacggg
ctgctgagcttcaccgtgcacgccaagcccaaggtccggaaggcagcccagcatggtgtg
tgcatggtgctcaagggcagtgagttcatgtttggggagaaggcccctgcccatcatcca
gccgccatctccactgcccagttctgcatccaggagattgagaagtccggaggctccaag
gaggctaccaccacgctgcacatgctgacgctgctcaaggacctgatggccagcttcccg
gagggcctggtcaagagctgcagcgagacgttcctcagggtcatgaccttgagccacgtg
ctggtgaccgcttgtgccatgcaggcctttcacagcctcttccatgccaggcctggccca
ggcaccctgtcggcagagctcaacgcccagatcattacggccttgtacgactacgtcccc
agcgagaacgacttgcagccccttctggcctggctgaaggtcatggagaaagcccatatc
aacctggtccggctgcagcgggacctggggctgggccacctccctcgcctttttgtaacc
gcgatgacctgcctcctttccccgtactcgcaggtggtggccgcagccacccagagcctc
aaggagatcctcacagaatgtgttgctccgcacatggccgccatcggctctgtgaccgcc
tcggctccagcacccgcccagtatgtcgccaggatgttcagggccgtggaggaaggcctg
acttacaagttccacgcagcctggggctccgtgctgcagctgctgagcgtcttcttccag
gcgtgcgggcggcaggcccatcctgtgatgaagaagtgcctccagtccttgtgcgacttg
cgcctgtccccccactttccccactcagccgcgctggatcaggccgtgggggctgccgtg
agcagcatgggacctgaggtggtgctgcaggctgtgcctctggagatcgacggctctgaa
gagaccctggatttcccacggagctggctgctgcccgtcatccgggaccatgtccgggag
actcggcttggcttcttcaccacctacttcctgcctctggcgaacaccctgaaaagcaaa
gcaacggagctggcccaggcgggcagcacagtggagtccaagatctacgacacgctccag
tggcagatctggaccttcctgcctggcttctgcacgaggcccacggatgtggccactgcc
tttaaagggctggcgaggacgctgggcatggctattagcgagcgcccagacctgagggtc
acggtgtgccaggctctgcgcaccctcatcaccaagggctgtgaggcagcggctgaccgt
gctgaagtgagccgctttgccaagaacttcctgccaatccttttcaacctgtacggacag
cccgttgcccccggagacaccccagcccctcgccgggtcatgctggaaaccatcaaaacg
tacctcaccataaccgagccccagctggtgaacggcttcatggaaaaagccagcgagaag
gtgcttgaccccgccagctctgacttcaccaggttgtctgtcctggacctggtggtggcc
ctggctcctcatgctgacgaagctgccatcagcaagctgtactccactatccgcccctac
ctggagagcaaggagcacggggtgcagaagaaggcctaccgtgtgctggaggaggtgtgt
gccagcccgcagggcccgtgtgcccaattcgtgcagagccacctggacgatctgaagaag
acgctcctggactccctgcgcaccacggcctcccccgccaagaggccccgcctgaagtgc
ctcatccacatcgtgaagcagctctccggagaacacgaggacttcatggctgcactgatt
ccagaggtcatcctgtgcaccaaggaggtgtccgtgggggcgaggaagaacgcttttgcc
ctgctggtggagatgggccatgccttccttcggattggcgagaatcaggaagaagccctg
cagcgcttcctggtcctgatctaccccggcctcgtgggcccagtgacgacggtcagctgc
accatcctggctctgacccacctgcttttcgagtttaaagagctgatgggcacccgccta
gtggcgcagctgctggagagtgtgtgcctgcttctggcctcccgcacccgcgatgtcgtc
aagtccgcgctgggctttgtcaaggtggtggtggccgtcatggatggggcgcacctggcc
aagcatgtgcagctggtgatggacgccatcgggaagctctcggacgacatgcgtcggcac
ttccgcacaaagctccggaacctgttcaccaagttcatccgcaagttcgggtttgagctt
gtgaaggggctgctgccagaggactaccacaaagtcctgatcaacatccggaaagccgag
gcccgggccaggcggcaccgctccctgagccaggctgccatggaggaggaggaggaggag
gaagaggaggaggaggagcccgcccagggcaaaggcgacagcattgaggagattctggct
gactcggaggacgacgaggaggaggaggagaagccagaaaggagccggggcaaggagcag
cggaagctggctcggcagaggagccgggcgtggctgaaagagggtggcggggatgagccc
ctcaacttcttggaccccaaggtggcccagcgtgtcctagccacgcagcccgggctgggc
cggggcaagaagagggaccatggcttcaaggtcagcgctgacggccggctgatcatccag
gaggacgacgacggagaccagatggaggaggaggagggcacgaagggtgaggaagaggag
gtagctgacctgatggaagatgtgaccgtccggagtagaaaataccaaaagcttaagcag
cgccaggaggccgccgacgaggagctggaggtgcccccgcagtaccgagctggaggctct
ggcatccatcgccctttggccaagaaagccaggcctgggactgagtacaaggccaagaaa
gcgaagggtgacgtgaagaagaagggtcggctggacccctacgcctacatccccctcaac
agaaccaagctgaaccgcaggaagaaggtgaagctgcagggtcagttcaaaggcctggtg
aaagctgcccagcggggctcccaggtgggacacaagctccgacgaaaggaccgccggccc
tga
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