Echinops telfairi (small Madagascar hedgehog): 101649813
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Entry
101649813 CDS
T08707
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101649813 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101649813 (TNPO1)
03009 Ribosome biogenesis [BR:
etf03009
]
101649813 (TNPO1)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101649813 (TNPO1)
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
101649813 (TNPO1)
Pre-60S particles
101649813 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
Arm
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
IBN_N
Cnd1
HEAT_EF3_N
TPR_IPO5
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_GCN1_C
Ltn1_1st
HEAT_Maestro
INTS7_N
HEAT_GCN1_C_2
UNC45-central
TPR_TTI1_C
Dopey_N
RTP1_C1
HEAT_DAAF5
VPS15-like_hel
DUF3689
Motif
Other DBs
NCBI-GeneID:
101649813
NCBI-ProteinID:
XP_004703599
UniProt:
A0ABM0IMP2
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDASPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDNDENVALEACEFWLTLADQPICKDV
LIRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDED
GIEEEDDDDDEMDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHREWV
VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK
YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS
VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLA
EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI
LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA
ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF
IFFCDAVASWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggaccggcaaaccaagatggagtatgagtggaaacctgatgagcaagggctt
cagcaaatcctgcagctgctgaaggagtcccagtccccagacaccaccatccagaggacc
gtgcaacaaaaactggaacaactcaatcagtatccagattttaacaactacctgattttt
gttcttacaaaattaaaatctgaagatgaacccacacgatcattgagtggtcttatcttg
aagaataatgtgaaagcacactttcagaatttcccaaatggtgtaacagactttattaaa
agtgaatgtttgaataatattggtgatgcttctcctctgattagagccactgtaggaatt
ttgattacaactatagcctccaagggagaattacaaaattggcctgacctcttaccaaag
ctctgcagcctgttggattcggaagattacaatacctgtgagggagcatttggtgctctt
cagaagatatgtgaagattctgctgagattttagatagtgatgttttggatcgtcctctc
aacatcatgattcccaaatttttacagttcttcaagcacagtagtcccaaaataaggtct
catgctgttgcatgcgtcaatcagtttatcatcagtaggactcaagctctgatgctgcac
attgattcttttattgagaatctctttgccttggctggtgatgaagaaccagaggtgcgg
aaaaatgtgtgccgggctcttgtgatgctgcttgaagttcgaatggatcgcctccttcct
cacatgcataatatagttgagtacatgctacagaggacccaagataatgatgaaaacgtc
gctttagaagcttgtgaattttggctcactttggctgaccaaccaatatgcaaagatgtt
ctcataaggcatcttcctaagttgattcctgtattagtaaatggcatgaagtattcagat
atcgatattattctcctgaagggtgatgtggaagaagatgaaacgattcctgatagcgaa
caggatataaggccacgttttcaccggtcaagaacagtggctcagcagcatgatgaagat
ggaattgaagaggaagatgacgatgacgatgaaatggatgatgatgataccatttctgac
tggaatctaaggaaatgttccgctgctgccctggatgttcttgcaaatgtgtatcgtgat
gaacttttgccacatattttgcctcttttgaaagaattactttttcatcgtgaatgggtt
gttaaagaatcaggcatcctggttttaggagcaattgctgaaggttgcatgcaaggtatg
attccatacctgcctgagctcattcctcaccttattcagtgcctctctgataaaaaggct
cttgtgcgttccataacgtgctggactcttagccgctatgcacactgggtagtcagccag
cccccagacacgtacctgaagccattaatgacagaattgctaaagcgtatcctggatagc
aacaagagagtacaggaagctgcctgcagtgcctttgctaccctagaagaggaggcttgt
acagaacttgttccttaccttgcttatatacttgatactctggtcttcgcatttagtaaa
taccagcataagaacctactcattctttacgatgccataggaacattagcagattcagtg
ggacatcatttaaacaaaccagagtatattcagatgctaatgcctcccctgatccagaaa
tggaacatgttaaaggatgaagataaagacctctttcctttacttgagtgcctatcttca
gttgccaccgccctgcagtctggcttccttccatactgtgaacctgtgtatcagcgttgt
gtcaacctggtgcagaagactcttgcacaagccatgttaaacaatgctcaacccgatcaa
tatgaggctcctgataaagattttatgatcgtggctctcgatttactcagtggcctggcg
gaaggactcgggggcaacattgaacagctggtcgcacgaagtaacatccttaccctaatg
tatcagtgcatgcaggataaaatgccagaagttcgacagagttcctttgccctgttaggt
gacctgactaaagcttgctttcagcatgttaagccttgcatagctgatttcatgccaata
ttgggaaccaatctaaatccagagttcatttccgtttgcaacaatgccacatgggcaatt
ggagaaatctccattcaaatgggcatagagatgcagccttatatccctatggtgttgcac
cagcttgtagaaatcattaacagacccaacacaccaaagacgttgttagagaacacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcag
tttataagaccctggtgtacctctttgagaaacataagagacaatgaggaaaaggattcg
gcattccgtgggatttgtaccatgatcagtgtgaatcccagtggagtaatccaagatttt
atatttttttgtgatgctgttgcatcatggattagcccaaaagatgatctcagagacatg
ttctgtaagatccttcatggatttaaaaatcaagttggggatgaaaattggaggcgtttc
tctgaccagtttcctcttcccttaaaagagcgtcttgcagctttttatggtgtttaa
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integrated database retrieval system
