Echinops telfairi (small Madagascar hedgehog): 101650086
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Entry
101650086 CDS
T08707
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101650086 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
101650086 (SPATA13)
Membrane trafficking [BR:
etf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101650086 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
101650086
NCBI-ProteinID:
XP_045149921
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
NGVLGGRDAATEPHEAKLSPSKLLRLFSGSRKRSGGPERPPPAGLAGNSATWHALASFRK
MGSFKKLRSSVLQGIQSREAADRQARPPPPSPPPACCEVSVQEPADNRLAYRRSRSTDNL
NFLKKSSFKRKSTSNLADLRVGPEKLAPQRTLSSSSADSEKFGSDRRTKRWKSPLRAKDF
DRVLKLVSNVADATWKRDRDSPKNGPPAPSDPGHRLQRHSRLHDDYSRRVSTCTEPDRRQ
GAPFPVGPAHSPATSQGPHIDVDTAVCPLEAKSSQASESAGAHPGRPSPSPATQEVPTRE
AADPPPPGQLALGSEQLSTPLRPTSPKPQSPGVGSVTLGGPSHHSALSLSSVESEERPEG
SAQKERASGPPQEGQQTPCGDEGAEDSGISSYSQLSLSGTIGPAEKKEEVLADDPRRRAS
ASAQDEERTEALRVPRRRWSSGKRSRPLPRPLSDYGQSVGRSLSIPEDSVAVDTQEMDLV
DSQPTPGLAPVGCPKGARRRRPMSVIGGVSFYGSTPAAEVDSLLTQPATRPPVPAHQVPP
YKAVSARFRPFTFSQSTPIGLDRVGRRRQMRASNISADGGPEPSALVDDNGSEEDYSYEE
LCQATPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEAANK
DWWWGRNEDKEAWFPASFVRLRVNQEEQPESSPSTPGEEREQGPGHGRPKHSENKPQMRT
NVIQEIMNTERVYIKHLQDICEGYIRQCRKHTGMFTAAQLATIFGNIEEIYKFQRKFLKD
LERQYNKEEPHLSEIGSCFLHHQEGFAIYSEYCNNHPGACLELANLMKQGKYRHFFEACR
LLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTPQHSDYNNIKAAYEAMKHVACLIN
ERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKITQQGKSQQRTFFLFDHQ
LVSCRKDLLRRDVLYYKGRTDMDAMVLVDLPDGRDRDFNLSVKNAFKLVSRATDEAHLFC
AKKHEDKVRWLQACADERRRVQEDQEMGMEISENQKKLAMLNAQRAGQGKSKGYSGCPAP
PPHQNLLPLHQRHVTVPTSVPQQQVFALAEPKRKPSLFWHTFTKLTPFKK
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
aatggggtcctgggcggcagggacgccgccacggagcctcacgaggccaagctgagcccc
tctaagctcctgcgcctcttttcgggcagcaggaagcggtccggtgggccggagaggccg
ccgcccgccggcctggcgggaaactcggccacctggcacgccctggcctccttccgcaag
atggggtccttcaagaagctgcgctcctccgtgctgcagggcatccagagccgggaggcg
gccgaccgccaggcccggccacccccgccgtcgccgccgccggcctgctgcgaggtcagc
gtccaggagcctgcagacaaccgcctggcctaccggcgcagcaggagcacggacaacctg
aacttcctcaagaagagctccttcaagcggaagtccacgtccaacctggccgacctcaga
gtgggccccgagaagctggcaccccagaggacgctgagcagctcgtccgcagactcggag
aagttcggctcggacaggaggaccaagcgctggaagagccccctcagggccaaggacttc
gaccgggtcttgaaactggtcagcaacgtggccgatgccacgtggaagagggacagggac
agccccaagaacgggccccctgcacccagcgaccctggccacaggctgcagcgccatagc
aggctgcacgacgactactctcgccgggtgtcaacctgcaccgagccggacagacggcag
ggcgcgcccttcccggtgggccctgcccacagtccggccacctctcagggtccccacatc
gacgtggacaccgccgtgtgcccgctggaagccaaaagttctcaggcgtcagaaagtgcc
ggggctcaccctggccgcccctcaccaagcccggccacccaggaagtacccaccagggag
gctgctgacccaccgcctccgggccagttagcactggggtctgagcagctctccactcct
ctgcggcccaccagccccaagccccagagcccaggcgtgggcagcgtgactttgggtggc
ccgagtcaccacagcgccctgtccctgagttctgtggagagcgaagagaggcctgagggt
tctgctcagaaggagcgggcttcggggcccccccaagaagggcagcagaccccctgtggt
gatgaaggtgctgaagacagcggcatcagcagctactcccagttgagcctcagtgggacc
attgggccagcagaaaagaaggaggaggtgcttgctgacgatccccggcggagggcctca
gcctcggcacaggacgaagagcgaacagaggccctgagggtccccaggaggaggtggagt
tctggcaagaggtccagacccttgcccaggcccctctcggactatggccagtcagtaggc
cggagcctgtccatccctgaagactccgtggccgtagacacccaggaaatggaccttgtg
gacagccagcccacgccaggcctggctcccgtcggctgcccaaaaggggctcgaaggcgc
cggcccatgtcggtgatcggcggtgtcagcttctatgggagcaccccggcggcggaagtg
gacagtctgctcacccaacccgccacccggcctccggtgccagctcaccaggtgccaccg
tacaaagccgtgtcggcccggttccgacccttcaccttttcccagagcacccccatcggg
ctggatcgagtgggccgtcggcgccagatgcgagcatctaacatctcagcagatggcggt
cctgagccctcagccctagtggacgacaacgggagcgaggaggactacagctatgaggaa
ctctgccaggccacgcctcgttacctgcagcccggcggggagcagctagccatcaatgag
ctcatcagcgatggcagtgtggtctgcgccgaagccctgtgggaccacgtgaccatggat
gaccaggagctgggcttcaaggccggagatgtcatccaggtgctggaggccgccaacaag
gactggtggtggggccggaacgaggacaaggaagcctggttccctgccagctttgtgagg
cttcgagtgaaccaggaggagcagccggagagctcccccagcaccccgggcgaggagcgc
gagcaggggcctggccacggccgccccaagcactccgaaaacaagccgcagatgaggacc
aacgtgatccaggagatcatgaacacggagcgcgtgtacatcaagcacctgcaggacatc
tgtgagggttacatccgccagtgtcgcaagcacacggggatgttcacggcggcccagctt
gccactatctttgggaacattgaagagatctacaagttccaaagaaagttcctgaaggac
ctggagagacagtacaacaaagaggagcctcacttaagtgagatcgggtcctgcttcctc
caccaccaagagggcttcgccatctactcggagtactgtaacaaccacccgggcgcctgc
ctggagctcgccaacctcatgaagcagggcaagtaccggcacttcttcgaggcctgccgg
ctgctgcagcagatgatcgacatcgccatcgacggcttcctgctcacgcccgtgcagaag
atctgcaagtacccgctgcagctggccgagctgctcaagtacaccacgccacagcacagc
gattacaacaacatcaaggccgcctacgaggccatgaagcacgtcgcctgcttgatcaac
gagcggaagcggaagctggagagcatcgacaagatcgcccgctggcaggtgtccatcgtg
ggctgggagggtttggacatcttggaccggagttcggaattgatccattcaggcgagctg
acgaaaatcacgcagcagggcaagagccagcagcggaccttcttcctattcgaccaccag
ctcgtgtcctgcaggaaggacctgctgcgcagggacgtgctctactacaaaggccgcacc
gacatggacgccatggtgctcgtcgacctgcccgacggccgcgaccgcgacttcaacctc
agcgtcaagaacgccttcaagctcgtcagccgggccaccgacgaggcccacctcttctgt
gccaagaagcacgaggacaaggtgcgctggctgcaggcgtgtgccgacgagcggcggcgg
gtgcaggaggaccaggagatgggaatggagatttcagaaaaccaaaagaaactcgccatg
ctgaacgcccagagggcggggcaggggaagtcgaaaggctacagcgggtgccccgcgccg
cctccgcaccagaacctgctcccgctgcaccagcgccacgtcacggtgcccaccagtgtg
ccgcagcagcaggtgttcgcgctggccgagccgaagcgcaagccctcgctcttctggcac
accttcaccaagctcaccccgttcaagaagtga
DBGET
integrated database retrieval system
