Echinops telfairi (small Madagascar hedgehog): 101650201
Help
Entry
101650201 CDS
T08707
Name
(RefSeq) vacuolar protein sorting-associated protein 13C-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
101650201
Membrane trafficking [BR:
etf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
101650201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
Plk4_PB1
Motif
Other DBs
NCBI-GeneID:
101650201
NCBI-ProteinID:
XP_045150883
LinkDB
All DBs
Position
Unknown
AA seq
2041 aa
AA seq
DB search
MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAG
QIDKLTLKIPWKNLYGEAVVATLEGLYLLVVPGASIKYDAEKEEKALQDIKQKELSRIEE
ALQKAAEKGAHSGEFIYGLENFVYKDIRPGRKRKKHKKHFKKPFKGHDRSKDKPKETKKD
TFLEKLATQVIKNLQVKITDIHIKYEDDVTDPKRPLTANEHWTPCILNEADKIIYKLLRL
DSLSAYWNVNCHLCYQGTREQILDQLKSGILRSCNRPSHHQCSKYLSMMDFLESVDYMVR
NAPYRKYKPYLPLHKNCRQWWKYAIDSVLEVHIRRYTQMWSWSHIKKHRQLLKNYKNVYK
NKLTQSKVSEETQKQIQDLEKTLDVFNIILARQQTQVEVIRSGQKLRKKSTDTGEKRGGW
FSGFWGKKESKKKDEEDSLIPETFDDLMTPEEKAKLFTAIGYSESTHNLTLPKQYVAHIM
TLKLISTSITIREKENIPEILKIQIIGLGTQVSQRPGAQALKIEAKLELWYITGLKQQNT
VPSLVTSIGDTASSLLQIQFETNPEHSPADQTLVVQSQPVEVTYDAKTINAVVEFFQSNK
GLDLEQITSATLMKLEEIRERTATGLTHIIETRKVLDLRINLKPSYLIVPQTGFYHEQTN
LLILDFGTFQLNSKDQSLQQTGNSSLEEIMDKAYDKYDVEIKSVQLLFARAEENWKKYRF
QHPSTMHILQPMDIHVELAKAMVEKDSRMSRFKVSGGLPLMHVRISDQKMKDVLYLINSI
TLPQKSPSQSPEKQISSIPIISDGTKGLLDTSLLLDVVESESEDEYFDAEEGDSQVGKGG
KGSELKKAAEPPNEELIHLLLKFEIKEVVLEFTKQQRQEETVLVLSVSQLGTEVTVRTFA
LAAVSYLKRISLDHHEIQGSKRKPLHLISSSDKPGLDLLKVEYVKADKNGPSFQTTFENT
EQTVKVAFSSLSLLLQTQALLSSITYLTNMIPSDHQNMADVKETQMLTEKQQKNSTPQKV
IVPTKDSGVIAFRLFAKLSAFCVIVCDEKSNIAEIKIQGLDSFLSLQSRKQSLFARLENI
IVTDVDPKTVHKNAVSIMGNEVFRFNLDLYPDATEGDSYSDMSKVDGVVSLNVGCIQIVY
LHKFLMSLLNFMNNFQAAKEALSAATAQAAEKAATSVKDLAQRSFRVSLNIDLKAPVIII
PQSSMSANALVVDLGLIRVQNHFSLVSGEDCLNPPVIDRMAVRLTKLKLSRTVIQPGISY
PDIQLLYPINLDFSINRNLAASWYHKLPVVEIKGQLDSMNVSLNEEDLNLLFKILAENLG
ETTDALDSRRPAKQETGENKDIEISTSQQNVYAPQGTFPVGMEEINSIDTISLLLNFEIK
EVVLTLMKKAEKKGRPFHELNVLQLGMEARVKTFDMTAKAYLKKITMRCFDFTDANGGPL
HIINSSNVTDEPLLKMLLTKADSDGPEFKTTHNNTKQKLKVSFSSLDLVLHLEALLSIMD
FLSSAVPSAEPSSSEKESELKPLVGESRSLALKAVSSSVSQSDVCDLRIIAELNAFNIFV
CDQKCNIADIRIQGMDASVSTTSKQTDVFARLKDIIVTNVDSLSIHKKAVSILGDEVFRF
QMTLYPGTTEGKAYADMSKVDGKLSLKVGCIQIIYVHKFFMSLLNFLNNFQTAKEALSAA
TAQAAEKAASGMKDLAQKSFRLLMDINLKAPVIIIAQSSTSPNAVVADLGFIRVENKFSS
VSVESSSLPPVLDKMSVQLTQLKLSRTVLQADSTQYDIEILKPVNMLLCIQRNLAASWYV
QIPGMEIKGKLKPMQIALSEDDLAVLMKILLENLGEASSQPSPTQSTQEVLRVRKDVPSG
SDLLKEQDLTHSKMPVEHSVTLQFDFHFESLSIILYNNDISQGSTLSFHNDRLRIGELRL
HLMASAGQMFKDGSMNISLKLKTCTLDDLREGIERATSRMIDKKNDQDNNSMIDVGYKQD
KNGSQIDAVLNKLYVCASVEFLMTVAEFFIRALPQSPENMAKETQISLRQTGPARIKSEK
G
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggagtcggtggtcgccgacctgctgaaccgcttcctgggcgactatgtggag
aacctgaacaagtctcagctgaagctgggcatttggggcggtaatgtggctttagataat
ctacagataaaagaaaatgctctgagtgaactagacgttccttttaaagtcaaagctggc
caaattgataagttaacgttgaagattccttggaagaacctttatggagaagcggttgtt
gcaaccctagaaggactatatctgcttgttgtccctggagcaagtattaaatatgatgct
gaaaaagaagaaaaagctttacaggatattaaacagaaagagctatctcgaattgaagaa
gcccttcagaaagcagcagagaaaggcgcgcattcaggggagttcatatatggcttggaa
aactttgtttacaaggacatcaggcctggacgtaaacgtaaaaagcacaaaaaacatttt
aagaaaccttttaaaggtcatgatcgctcaaaagataagccaaaagaaaccaaaaaggat
acgttcttggaaaaactggccactcaagtaataaaaaatttacaagtgaaaatcacggac
attcacattaagtatgaagatgatgtcaccgatccaaagaggcctcttactgcaaatgaa
cactggactccatgcatactaaatgaagcagacaaaattatatacaagcttctacgactt
gatagtcttagtgcctactggaatgtaaactgccacctgtgttaccagggaacaagagaa
cagatcttggatcagctaaaaagtggaattcttagaagttgcaatagaccctcacatcat
caatgtagtaagtacctcagtatgatggactttttggagtcagtggattatatggttaga
aatgccccttacaggaaatataagccttatttaccacttcataaaaattgtcgacaatgg
tggaaatatgcaattgattctgttcttgaggttcatataagaaggtatacccagatgtgg
tcttggagtcacataaaaaagcataggcagttgctcaagaattataaaaacgtctacaaa
aacaaactaactcagagtaaagtttcagaggaaacgcagaaacaaattcaggacttggag
aagacccttgatgtttttaacataattttagcaaggcaacaaacacaagttgaggtgatt
cgatctggacaaaaattaaggaaaaaatctactgatacaggcgagaaacgtggaggctgg
tttagtgggttttggggtaagaaggaatctaagaaaaaggatgaagaagactctttgatt
cctgaaacttttgatgacctgatgaccccagaggagaaagccaagctcttcactgcaatt
ggttacagtgagagcactcacaacctaaccttgcccaagcagtatgtcgcccatataatg
acactaaagttaataagtacgtctattacaataagagaaaaagaaaacattccagaaata
ctaaaaatccagataattggtttaggaacgcaagtctctcagcgaccgggagcacaagca
ctgaagatagaagcaaaattagaactctggtatataacaggtctgaaacagcaaaatact
gtaccatcacttgtgacttccattggcgatactgcttcttccctgcttcaaatccagttt
gagaccaatccagagcatagtcctgctgaccagactctggtggttcagtcccagcctgtg
gaggtgacctatgatgctaaaaccattaatgcagttgttgaattctttcaatcaaacaaa
ggattagatcttgagcaaataacgtcagctacattgatgaagctggaagaaattagagag
agaacagccacaggacttacccatataattgaaactcggaaagttcttgacttaaggata
aatttgaaaccttcgtatctaatagttccacagacgggcttctaccatgaacaaacaaat
cttcttatattagattttggtacatttcagctcaacagtaaagatcaaagtttgcagcag
actggcaattcatctctggaagaaataatggataaggcatatgacaagtatgatgttgaa
ataaaaagtgtgcaactactctttgcaagagcagaggaaaactggaaaaagtatcgattt
cagcatccatcaactatgcatatattacaacctatggacattcatgttgagttggccaag
gcaatggtggaaaaagacagtagaatgtctagattcaaagtgtcaggagggcttcctttg
atgcacgtgagaatttctgaccagaagatgaaagatgtgctctacctgattaacagcata
accttgccacagaaatcaccttcgcagtctccagagaaacagatatcctcaattcctatt
atttctgatgggaccaaaggtctactggatacttcactattacttgatgtagtggaatca
gagtctgaggacgagtattttgatgctgaagaaggagactctcaggtggggaagggtggg
aaaggatcagagttaaaaaaagctgcagagcctccaaatgaggaactcattcatcttctg
ctcaagtttgaaatcaaagaggtggtgttggagttcaccaaacaacagcgacaggaagag
acagttctagttctcagcgtctctcagttagggaccgaagtgacagtgagaacgtttgcc
ctagctgcagtgtcttatttaaagagaatcagcttggatcaccacgaaattcaaggatcc
aaaaggaagccccttcatttgatcagctcttctgacaaacctggattagatcttttaaag
gtggagtatgttaaggctgataagaatggacctagtttccaaactacttttgaaaacacc
gaacaaacagttaaggtggccttttcctctttaagtttgttgctacaaacacaggccctt
ctctcttctatcacatacctgacaaacatgattccgtcagatcatcaaaacatggctgat
gtcaaggagacacaaatgttaactgaaaagcaacagaaaaattcaactccgcaaaaggtg
attgtacccactaaagacagtggcgtcattgccttccgtctgtttgccaagttgagtgct
ttctgtgtcattgtttgtgatgaaaagagcaatattgctgaaatcaagatccaaggcctt
gattcctttctttctcttcaatcaagaaaacaatcactatttgccagactggaaaatatt
attgtcacagatgttgatcctaagacagttcataaaaacgctgtctcaataatgggaaat
gaagtttttcgtttcaacttggatttgtacccagatgctactgagggggattcctattct
gacatgtccaaagtagatggtgtggtatcactgaatgttggctgtattcagattgtgtat
cttcataaattcctgatgtcacttctgaacttcatgaacaattttcaggcagccaaagaa
gcgctgagtgctgccacggcccaagcagcagaaaaggccgccacgagtgtgaaagatctg
gcccagaggagtttccgtgtttccctcaatattgatttaaaagcaccggttataatcatc
ccacagtcttccatgtctgccaatgcattggtggtagatcttggcttaatcagagttcag
aatcacttcagtctggtatctggtgaagattgcttaaatccaccagtcattgataggatg
gctgtgcgtctcacaaagctgaaactctctaggacagtgatccagccaggcatctcctat
cctgatattcagctgttgtacccaattaacttggacttctctataaatcggaatctagct
gcatcttggtaccacaagttacctgttgtagaaattaaaggacaacttgattcaatgaat
gttagtctaaatgaagaagatcttaatcttttatttaaaatactagcagaaaatcttggt
gaaactactgatgccttagatagcaggagaccagcaaaacaggagacaggtgaaaataaa
gatattgagatctctacatcacaacagaatgtatatgctccacaaggcactttcccagtt
ggaatggaagaaatcaactctatagacaccattagtttgctgttaaactttgaaatcaaa
gaggttgtccttactttgatgaaaaaagcagaaaagaaaggaaggcctttccatgaactc
aatgtgctgcagcttggaatggaagctcgagttaaaaccttcgatatgactgcgaaagct
tatcttaaaaaaatcaccatgcgttgttttgatttcactgatgcgaatggagggcctctc
catattattaactcttctaatgtaactgatgagccccttctgaaaatgttactgacaaag
gcagacagtgatggaccagaatttaaaaccactcacaacaataccaaacagaaactgaag
gtttcattttcatccttagacttagtacttcatctggaagctctgctctccattatggat
tttctatcatctgctgttccatctgctgaaccttcctcctctgagaaggaatccgagctg
aaaccacttgtaggggagtccaggagccttgctcttaaagctgtgtccagcagcgtttct
caaagtgatgtgtgtgatctaaggatcatagctgaactcaatgcatttaatatctttgtg
tgtgatcagaagtgtaacattgcagatattagaatacagggaatggatgcctctgtatct
acaacatccaagcagactgatgtgtttgccaggcttaaggatatcatagtaacaaatgtt
gattcactctccattcataaaaaggctgtctctattttgggagatgaagtttttagattc
caaatgactctctatcccggcaccacagaaggaaaggcctatgctgacatgtctaaagta
gatggcaaactgagtctcaaagtgggttgtattcaaattatttatgttcataaattcttc
atgtcacttttgaacttcctcaacaatttccaaactgccaaagaagcgctgagtgcagcc
acagcccaggctgccgagaaagctgcttctggcatgaaagacttggctcaaaagagtttc
cgccttttgatggacatcaacttgaaagccccggttattatcattgctcagtcttcaaca
tcacctaatgctgtggtagctgacctgggcttcatcagggtcgaaaataaatttagctcg
gtctctgtggaaagttcttcacttcccccagtcctagataaaatgagcgtacagctcact
cagttgaagctgtccagaactgttttgcaggctgactcgacacaatatgacattgaaatt
ttaaaaccagtcaacatgcttttgtgcatacaacggaatttagcagcatcatggtatgtg
caaattccagggatggagataaaaggaaaactaaaacctatgcagattgctctcagtgag
gatgacttagcagttttaatgaaaattttgctggagaatcttggagaagcttcttcacag
ccaagccctacacaatctactcaggaggttctaagagtgagaaaagatgttccaagcgga
tctgacctcctcaaagaacaagatttgacacactcaaagatgcctgtggaacacagcgtc
actctgcaatttgactttcactttgaatccctttccatcatcctttataataatgatatc
agccagggttccacgctttcgttccataatgaccgtttacggattggtgaactcagacta
catcttatggcctcagcaggacaaatgtttaaagatggttcaatgaacatcagccttaaa
cttaagacatgcactcttgatgatctcagagaaggcattgagagagcaacatcaagaatg
attgacaagaagaatgaccaagataacaacagtatgattgatgtaggctacaaacaggac
aaaaatggaagtcaaattgatgctgttctcaacaagctgtatgtgtgtgccagtgtggag
tttctgatgacggtggcagaattcttcatcagagccttgccccagagtccagaaaatatg
gcaaaagaaacccagatttcactaagacagactggtccagcaagaatcaaatcagagaaa
ggttaa
DBGET
integrated database retrieval system
