Echinops telfairi (small Madagascar hedgehog): 101650421
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Entry
101650421 CDS
T08707
Name
(RefSeq) nuclear RNA export factor 2-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03008
Ribosome biogenesis in eukaryotes
etf03013
Nucleocytoplasmic transport
etf03015
mRNA surveillance pathway
etf05014
Amyotrophic lateral sclerosis
etf05164
Influenza A
etf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101650421
03015 mRNA surveillance pathway
101650421
03008 Ribosome biogenesis in eukaryotes
101650421
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101650421
05168 Herpes simplex virus 1 infection
101650421
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101650421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101650421
03009 Ribosome biogenesis [BR:
etf03009
]
101650421
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101650421
mRNA cycle factors
Stress granule specific factors
101650421
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101650421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
RRM_NXF1-2
LRR_8
LRR_9
LRR_4
LRR_NXF2
Motif
Other DBs
NCBI-GeneID:
101650421
NCBI-ProteinID:
XP_045146533
UniProt:
A0AC55D465
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MYSTAKNFRTYRTEEYKGGGNTSRGRVNYKSYFHENCGEENVYYKNNGYKSRLSQFQEDD
GNTAMSDIQKDLHPRHNLSTTDDNNRKVARDNKDLIHITEWRDGNHQMRNMNKNEPGCKD
RTFPMTKNKGPMPKYRTPSKREIEENGQNNIYGNWFKITIPYGRKYTKTWLLNSIQSKCS
VHFTPVDFHYVRSQAHFFVKNSTTAFALKNVNYKIHDENNHQVRLFVKESAAPSSEQNKL
KPEEIEQLKLAMKKRFDVSQKSLNLQSFRFDQDLMSHDIDMILNRRNCMSATLTVIEENF
PELLSLNLCSNKLYQLDGLADIIPKAPQIKILNLSNNELKSLRQLDKIREMKLEELWLQG
NPLYNNFSNYSTYMSAILDYFPKLLCLDGKDVTHSMDVETGASEILKPSKKNHGVSEMLK
NLVLQFLEQYYSIYDCGDRSRLLDAYHDEACFSLTIPCNPKELVPLSLYKYSKSNRNMKN
CKDHVLLTQLLKHTKRDVVDFLRVLPKTQHDLSSFMVDICILTEKMLCFSVNGRFKEEVE
ATCPVILRAFTRIFIVIPASNSRLCIVNDTLTVSNACPKEIQSDVSIPARAPSSIPVPTI
SQEQQAMVQAFSTQSGMKFNWSLKCLEQNDWNYAVAGQNFTLLKAEGKIPKEAFQQIS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtactcaacagcaaagaattttaggacatacagaactgaagaatacaaaggtggtggt
aacacctctcgaggaagagtgaattataagagttatttccatgagaattgtggtgaggag
aacgtttattataaaaacaatggatataagtctaggctttcccaattccaggaagatgat
ggaaatacagctatgagtgatatccaaaaggacctccacccaagacacaacctttctacc
actgatgacaacaatagaaaagtggcacgggacaataaagatctaatccatattactgag
tggagagatggaaaccatcaaatgagaaacatgaacaagaatgagcctgggtgtaaggat
agaacatttccaatgacaaaaaataaggggcctatgccaaaatatagaacaccttcaaag
agagaaatagaagagaatggacagaataacatttacggaaactggttcaagatcacaatt
ccttatgggagaaagtataccaaaacttggctactgaattccatacagagcaaatgcagt
gttcacttcactccagttgatttccactatgtaagaagccaggctcacttctttgtcaag
aatagtaccactgcttttgcgctgaagaatgtcaactataagattcatgatgaaaataac
catcaggtaaggctatttgtcaaagaatctgcggcgccctcttccgagcagaataagtta
aagcctgaagaaatagagcagctaaagctggccatgaagaaacgatttgatgtctctcag
aaatcgcttaacctccagagctttcgctttgaccaagacttaatgagccatgatattgac
atgatcctgaatcgaagaaactgcatgtctgccactctgacagtcatagaagagaatttc
cctgagctcttgtccttgaacttgtgcagcaataaactgtaccagctggatggcctggct
gacattataccaaaggccccccaaatcaagatcttgaacctctccaacaatgagctgaag
tctctgcggcagttagacaagataagagagatgaaacttgaagaattgtggttacaagga
aacccattgtacaacaacttctcaaactattccacctatatgagtgccatcctggattat
tttcccaagttgctgtgcctggatggcaaggatgtcacccattcaatggatgttgagact
ggagcttcagagatactgaaaccctccaagaaaaaccatggagtatctgagatgctgaag
aatctagtcctacaattcctagagcaatattactcgatctatgactgtggtgacagaagc
cgtctccttgatgcataccatgatgaagcctgcttctccctgaccattccctgcaacccc
aaggaactggttccactaagcttgtacaagtactcaaagagtaacagaaatatgaagaat
tgcaaagaccatgttctcctgactcaactgctgaaacacacaaaacgtgatgttgttgac
ttcctcagggtgttgcccaaaactcaacatgacctcagctccttcatggtggatatatgt
atcctgaccgaaaagatgctttgcttttctgttaatggtcggttcaaggaggaagtggaa
gcaacatgcccagttattcttcgtgccttcactaggatcttcattgttattcctgccagc
aattccaggctgtgcatcgtgaatgacacactgactgtgagtaatgcctgccccaaagag
atccagagcgacgtctctatcccagcgcgagcaccctcttccatccctgtgcctaccatc
tcccaagagcagcaggctatggtgcaggcgttctctacccagtctgggatgaaattcaac
tggtctctgaagtgtctggagcaaaatgattggaactatgctgtagctggacagaacttc
actttgctcaaggctgagggtaagatcccaaaagaggccttccaacaaatctcctag
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integrated database retrieval system
