KEGG   Echinops telfairi (small Madagascar hedgehog): 101650730
Entry
101650730         CDS       T08707                                 
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
etf  Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:etf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101650730 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:etf03021]
    101650730 (TAF5)
   03036 Chromosome and associated proteins [BR:etf03036]
    101650730 (TAF5)
Transcription machinery [BR:etf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     101650730 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     101650730 (TAF5)
Chromosome and associated proteins [BR:etf03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     101650730 (TAF5)
    STAGA complex
     101650730 (TAF5)
    TFTC complex
     101650730 (TAF5)
    SAGA complex
     101650730 (TAF5)
    SLIK complex
     101650730 (TAF5)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_VPS8 ANAPC4_WD40 DSE1_N Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_Aladin WDR90_beta-prop_4th PAC11 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 CFAP251_N Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SPT8 ASA1 Beta-prop_NOL10_N Beta-prop_WDR19_1st WD_LRWD1 Tricorn_2nd PEP5_VPS11_N Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_RIG_1st CDK5RAP3 RAB3GAP2_N eIF2A Cytochrom_D1 Beta-prop_ACSF4 LisH_PAC1
Other DBs
NCBI-GeneID: 101650730
NCBI-ProteinID: XP_004701006
UniProt: A0ABM0IIV9
LinkDB
Position
Unknown
AA seq 719 aa
PAAAPEASAPQDRQTLLAVLQFLRQSNLREAEEALRREARLLEEAVAGSGAPGEADVTGA
EAASALLSRVTASAPGPAAPDPPGAAASGAGAVSGSASGPVAPGKVASVVVEDQPDVSAV
LSAYNQQGDPAMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAK
SFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHL
QEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKSKVFFGLLKEPE
IEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSDKLDKI
MNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTP
RKLRSVKQATDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS
SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPHGYYFVSGGHDRVARLWATDHYQPLR
IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRVFTGHKGPIHSLAFSPNG
RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAI
KAFEDLETDDFTTATGHINLPENPQELLLGTYLTKSTPVAHLHFTRRNLVLAAGAYSPQ
NT seq 2160 nt   +upstreamnt  +downstreamnt
cccgccgcagctccggaggccagtgctccccaggaccggcagactctgctggcggtgctg
cagttcctacggcaaagcaacctccgtgaggccgaagaggcgctgcgccgcgaggctcgg
ctgctggaggaggcagtggcgggctctggagccccgggagaagcggacgttaccggcgcc
gaggcagccagcgcgcttctcagccgggtcaccgcctcggcccccggccccgcagccccc
gaccctccgggggccgcagcgtcgggggccggcgccgtctcgggctcagcctcgggtccc
gtggctccggggaaagttgcaagtgttgtcgtggaagaccagccagatgttagtgctgtg
ctctcagcttacaaccagcagggagaccctgccatgtacgaggagtactacagcggactg
aagcacttcattgaatgttctctggactgccatcgagcagaactatctcaactcttttat
cctttgtttgtgcatatgtacttggagctagtctacaatcaacatgaaagtgaagcaaaa
tcattctttgagaagttccatggagatcaagaatgttattaccaggacgacctccgagta
ttatctagtcttaccaaaaaggagcacatgaaagggaatgagaccatgttggacttccga
acaagtaaatttgttttgcgaatttcccgggactcataccaactcttaaagaggcatctt
caggagaaacagaacaatcagatatggaacatcgttcaggagcacctctacatcgacatc
ttcgatgggatgccgcgtagtaagcagcagatagacgccatggtgggaagtttggcagga
gaggctaaacgagaggcaaacaaatcaaaggtcttttttggtttattaaaagaaccagaa
atcgaggtgcccttggatgatgaggatgaagaaggagaaaatgaagaaggaaaacctaaa
aagaaaaagcctaaaaaagatagtattgggtccaaaagcaaaaaacaagaccccaatgct
ccacctcagaacagaattcctcttcccgagttgaaagattcagataagttggataagatt
atgaatatgaaagaaaccaccaaacgagtccgccttggtccagactgcctcccctctatc
tgcttctatacattccttaatgcttaccagggcctcactgcagtggatgtcactgacgat
tctagcctgattgctggaggttttgcagactcaactgtcagagtgtggtctgtgacaccc
agaaagctccgcagtgtgaaacaagccacagatcttagcctcatagacaaagaatcggat
gatgtcttagaaagaatcatggatgagaaaacagccagtgagctgaagattctgtatggt
cacagtgggcctgtctatggagccagcttcagcccggataggaactacctgctttcctct
tcagaagatggaactgttcgattgtggagccttcagacgttcacctgcttggtgggctat
aaaggacacaactaccctgtatgggacacacagttttctccccacggatactattttgtg
tcagggggtcatgaccgagtagctcggctctgggctacagaccactaccagcctttacgg
atatttgctggacatcttgctgatgtaaattgtaccagattccatccaaactctaattat
gttgctacgggttctgcagaccgaacagtgcggctttgggatgtcctgaatgggaactgt
gtaagagtcttcactggacacaagggaccgattcattccttggcattttctcccaatggg
agattcctggctacaggagcaactgatggcagagtactcctgtgggatattggacatggt
ttaatggttggagaattaaaaggacacacagatacagtttgttcacttaggtttagtaga
gatggtgaaattttagcatcaggttcaatggataatacagtccggttgtgggatgctatc
aaagcatttgaagatttagagactgatgactttactacagccactgggcacataaactta
cctgagaatccacaggagttattgctgggaacatacctgaccaaatcaacaccagttgca
cacctccattttactcgaaggaacttggttctagctgcaggagcttacagtccacagtaa

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