Echinops telfairi (small Madagascar hedgehog): 101651032
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Entry
101651032 CDS
T08707
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
101651032 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etf04147
]
101651032 (COPA)
Membrane trafficking [BR:
etf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
101651032 (COPA)
Exosome [BR:
etf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101651032 (COPA)
Exosomal proteins of bladder cancer cells
101651032 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
101651032
NCBI-ProteinID:
XP_004716569
UniProt:
A0ABM0J7E4
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDSDSIILFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAQLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEASDGLGDDTLGKGQEEGGGWDVEEDLELPPE
LDIPPGAAGGAEDGFFVPPTKGTNPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQ
FAPYKQLFLQTYARGRTTYQALPCLPSMYSYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LGYQLTTVGKFEEAVGKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILTACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YFPEFQGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccctggatcctgaccagtttacacaatggagtcatccagttatgggactatcggatg
tgtaccctcatcgacaaatttgatgaacatgatggtcctgtacgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtatggaattac
aagcttcgacgctgcctcttcacgttgcttgggcacttagactacatccgcacgacattt
tttcatcatgagtatccttggattctgagtgcctccgatgatcagaccatccgagtgtgg
aactggcaatctaggacctgtgtctgtgtgttaacagggcacaaccactatgtaatgtgt
gcccagttccacccctcagaagacctggtggtatcagccagcctggaccagactgtacgc
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgcggtggagtcagat
gtgagaggaataactggtgttgacctgtttggaactacggatgcagtggtgaaacatgta
ctggagggccacgatcgtggagtgaactgggctgctttccaccccactatgcccctcatt
gtgtctggggcggacgaccgtcaagtcaagatctggcgcatgaatgaatcaaaggcttgg
gaggttgatacctgccggggccattataacaatgtatcctgtgctgtcttccatcctcgc
caagagttgatcctcagcaattctgaggacaagagtatccgagtttgggatatgtctaag
cggactggagtacaaaccttccgtagggaccatgatcgattctgggtcctggctgcccac
cccaatctcaacctgtttgctgcaggacacgatggtggcatgattgtttttaaactggag
cgagaacggccagcctatgctgttcatggcaatatgctgcattatgtcaaggaccgattc
ttacgtcagttggattttaatagctccaaagatgtagctgttatgcagttaaggagtggt
tccaaatttccagtgttcaacatgtcatacaatcctgcagaaaatgccgttttactgtgt
acgagagccagcaatttagagaatagtacttatgacctatacaccatcccgaaggatgct
gactcccagaatcctgatgcccctgaagggaaacgatcttcaggcctgacagccgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttttgatcaagaatcta
aagaatgagatcaccaaaaaggtgcaggtgcccaactgtgatgagatcttctatgcaggc
acaggcaacctcctgcttcgagattcggactccatcatactctttgacgtacagcagaag
cgaaccctcgcgtctgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcccatgtagcattactggccaaacatgagcactcatgccctctgcctcttacagccatt
gtgatctgtaaccgcaaactggaagctctgtgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gccgtcactactggggaccacgggatcatacggactctggatttacccatctacgtcaca
cgggtgaagggcaacaacgtatattgcctggacagggagtgtcgtcctcgtgtcctcacc
attgatcccactgagttcaagttcaagttggccctgatcaacaggaaatacgatgaggtg
ctgcacatggtgcggaatgccaaactggttggccagtccatcattgcttatctccagaag
aagggctatcctgaagtggcactgcactttgtcaaggatgaaaaaactcgctttagtctg
gcactggagtgtggcaacattgagattgctctggaagcagccaaagcactggatgacaag
aactgctgggaaaagctgggggaagtggccctactacaggggaatcaccagattgtggaa
atgtgctatcagcgcaccaaaaacttcgacaaactttccttcctgtatcttattacgggc
aacctagagaaacttcgcaaaatgatgaagattgctgagatccggaaagacatgagtggc
cattaccagaatgccctgtacctgggcgacgtgtcagagagagtgcggatcttgaagaat
tgcgggcagaagtcgctcgcctatctcacagcagctacccatggcttagatgaagaagct
gagagcttaaaggagacattcgacccagagaaagagaccatcccagacattgaccctaat
gcccagctgctccagccacctgcacctatcatgccactggatactaattggcccttgttg
actgtgtccaaaggattctttgaaggctccattgccagcaaggggaagggaggagcgctg
gctgctgacattgacattgacactgtagggactgagggctggggagaggatgccgagttg
cagctggatgaagatgggtttgtggaagcttctgacggtttgggggatgatactcttggc
aaaggacaagaagaaggaggtggctgggatgtagaagaagatttggagcttcctcctgag
ctggatataccccctggggcagctggtggagctgaggatggtttctttgtgccccccacg
aagggaaccaatccaactcagatctggtgcaataactctcagctcccagttgatcacatc
ctggcaggctcttttgaaacagccatgcggctcctacatgaccaggttggggtaacccag
tttgccccctacaagcaactatttctgcagacctatgcccgaggccgcaccacctatcag
gctctgccctgcctgccctccatgtacagttaccctaatcgaaattggaaggatgcaggg
ctaaagaatggtgttccagcggtaggtctgaagctgaatgacctcatccaacggttgcag
ctgggctaccagcttaccacagtgggcaagttcgaggaggctgtggggaaattccgctcc
atcctactgagtgtgccgcttcttgtagtggataataaacaggagattgcagaggcccag
cagctcattaccatctgccgtgagtacattgtgggtttgtccatggaaatagaaaggaag
aagctgcccaaggaaacccttgaacaacagaagcgcatttgtgagatggcagcctatttc
actcactccaaccttcagccagtgcacatgatcctggtgctacgcactgccctcaacctc
tttttcaaacttaagaatttcaagacagctgccacctttgctcggcgcctgctggaactt
ggccccaagcccgaggtggctcaacagacccggaaaatcctgactgcatgcgagaagaac
cccacagatgcctgccagctcaattatgacatgcacaacccctttgacatatgtgctgct
tcttaccggcccatctaccgaggaaagccagtggagaagtgtccgctcagtggagcctgc
tatttccctgaattccagggacaaatctgcagggtcactacagtgacagagattggcaag
gatgtgattggtctaaggatcagccctctgcagtttcgctaa
DBGET
integrated database retrieval system
