Echinops telfairi (small Madagascar hedgehog): 101651392
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Entry
101651392 CDS
T08707
Name
(RefSeq) LOW QUALITY PROTEIN: antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf02010
ABC transporters
etf04145
Phagosome
etf04612
Antigen processing and presentation
etf05163
Human cytomegalovirus infection
etf05168
Herpes simplex virus 1 infection
etf05169
Epstein-Barr virus infection
etf05170
Human immunodeficiency virus 1 infection
etf05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101651392
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101651392
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
101651392
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101651392
05168 Herpes simplex virus 1 infection
101651392
05163 Human cytomegalovirus infection
101651392
05169 Epstein-Barr virus infection
101651392
09163 Immune disease
05340 Primary immunodeficiency
101651392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
etf02000
]
101651392
Enzymes [BR:
etf01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
101651392
Transporters [BR:
etf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
101651392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_30
SMC_N
AAA_21
AAA_22
AAA_25
AAA_29
AAA_16
AAA_15
AAA_23
SRP54
Zeta_toxin
AAA_33
Thymidylate_kin
AAA_18
AAA_5
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
101651392
NCBI-ProteinID:
XP_045148221
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MPLPDLRSWASLLLLDLALLWLLQGTLGALLPGGLPGLWLEAAVRLGGLWCLLKLRGLPE
VGGTLLPMLCLVLPLFLSLRALVPGALSAPPARVASAPWSWLLVGYGAAALSWAIDILGG
DFDPEAFASAMFFMCLFSFGSSLSAGCRGGSFMVTMSRINLRIRDLLFASLLRQDLGFFQ
ETKTGELDSRLSSDTTFMSRWLPLNPLFQALLLEIQDAVAKSGQIVQEAVGGLQTVRSFG
AEEHEVCRYKEALERCRKLRWQRDSERALYLLLRRLLQLAVQLLMLNCGLQQILAGELTQ
GGLLSFLLYQENVGSHVFSLVYMWGDMLSNVGAAEKVFAYLDRQPNMPPSGTRAPSHLEG
RVEFHDVSFAYPSRPDQPVLKGLSFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPSGGQ
VLLDGEPLSQYEHHYLHRKVVLVGQEPVLFSGSVRDNIAYGLENCRDEEVLAAARDAHAD
QFIAKMEHGMHTEVGEKGSQLAVGQKQCLAIARALVRDPRVLILDEATSALDADCEQALQ
DWKSXGNRTVLVIAHRLKTVQGADQILVLKNGELQDHAQLIQEQDTYASLLGLD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccactccctgacctgagatcctgggccagcctgctgctgctggacttggccttgctc
tggctccttcaggggaccctgggggctctgctccctggagggcttcctggcctatggctg
gaggcagccgtccgccttgggggcctctggtgcttgctgaagctgagagggctgccggag
gttggggggacactgctgcccatgctctgcctggtgctgcccctctttctctcactgagg
gctctggtcccaggggccttgagtgcacccccagccagggtagcctcagccccttggagc
tggctgctggtgggctatggggctgcagccctaagctgggcgattgacatcctgggaggg
gactttgaccctgaagcctttgccagtgccatgtttttcatgtgcctcttctcctttggg
agctcactgtctgcaggctgccgcgggggctccttcatggtgaccatgtccagaatcaac
ttgcgcatccgggacctgctctttgcctccctgcttcgccaagacctcggcttcttccag
gagactaagacaggcgagctggattccaggctgagctcagataccacgttcatgagtcgc
tggcttcctttgaatccactctttcaggcgttgctcctggagatccaggatgctgtggcg
aagtcagggcagatcgtgcaggaggcagtcggagggctacagactgtgcggagttttggg
gccgaggagcatgaggtctgtcgctacaaggaggccctggaacgttgtcggaagctgagg
tggcaacgagattcagagcgagccctgtacctgcttttgcggaggctgctgcagctggct
gtgcagctgctgatgctgaactgtggcctgcaacagatcctggccggagagctcacgcag
ggcggactgctctccttcctgctctaccaggagaacgtggggagccacgtgtttagcctg
gtgtacatgtggggagatatgctgagcaacgtgggagctgccgagaaggtgtttgcctac
ctggaccgacagccaaacatgcccccctcggggacacgggccccttcccacctggagggg
cgtgtggaattccacgatgtctcctttgcttaccccagtcgaccggaccagcctgtgctc
aaggggctgagcttcactcttcgtcctggtgaggtgactgcgctggttgggcccaatggg
tctgggaagagcaccgtggccgccctgctgcagaatctgtaccagcccagcgggggccag
gtgctgctggatggggagcccctctcccagtatgagcaccactacctgcatagaaaggtg
gtgttggtggggcaggagccagtcctcttctcgggctcggtgagagacaacattgcttat
ggcctggagaactgcagggatgaggaggtgctggcagcggccagggacgcccacgcagac
caattcatagcgaagatggagcacggcatgcacacagaagtcggggagaaagggagccag
ttggctgtggggcagaagcagtgtctggccattgcgcgggcccttgtgcgagacccccgg
gtgctcatcctggatgaggccaccagtgccctggatgctgactgtgagcaggcgctgcag
gactggaaatcctgagggaaccggacggtgctggtgattgctcacaggctgaagacagtt
cagggtgctgaccagatcctggtgctcaagaacggggagctgcaggaccacgcccagctc
atacaggagcaggacacctatgccagtctgctgggcctggactga
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