Echinops telfairi (small Madagascar hedgehog): 101651539
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Entry
101651539 CDS
T08707
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etf03041
]
101651539 (DDX20)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101651539 (DDX20)
Spliceosome [BR:
etf03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
101651539 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
101651539
NCBI-ProteinID:
XP_004699576
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MAAALEVPAASASDEMAGPAPEPPPGPARSLRTAHDLGGPRPRTGDVLLAEPADFESLLL
SRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENL
STQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKNCHIAVGSPG
RIKQLIELDYLNPASVRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEV
LANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQELFSRIPF
NQALVFSNLHSRAQHLAEILSSKGFPAECISGNMSQNQRLDAVAKLKQFHCRVLISTDLT
SRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMNIAQRC
NLSLLPLPDPVPPGLMEECCGQDVQDVQAKAPVHEHASASAPTQAATGQTTHRIERTFQT
PKPRGVQTASSRLTSVSAQPKSTTRQKLPAKSHSHCGVSEKAMSPKEPGGCALPPEEQMR
ASEQRPVESSASSQHPPVSLPQIPCLSSFKALPLCALSFTELVEDYDHYIREGLEKPVEI
IRHYTGPGDPAVSHQNGFVRHRVPEERVQVLASSSQSGDSESDSDSYSSRTSSQSKGNKS
YLEGSSDTQIKDPRPTLVGGRTALEQPPGGKDTPSLEEYHRSPEIPLTARHKGGAHQRAK
QSRRNLSRRSSYRAQAEAQEDSWYDCHREAHPGFSDNYQDYEEYWRAYYRAWQEYYAAAS
QSYYWNAQRHPNWMAAYQMHTVYLQEMMRAHQRL
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgttggaagtgcccgcggcctcagcctccgacgagatggcgggcccggcg
ccggagccgcccccggggccggcgcgcagcctgcggacggcccacgacctcggcggcccg
cggccccgcacgggggacgtgctgctggccgagcccgcggatttcgagtcgctgctgctg
tcgcggccggtgctggagggcctgcgggcggcgggcttcgagcggccctcgccggtgcag
ctcaaagccatcccgctggggcgctgcggcctcgatttgattgttcaggcgaagtctggt
actgggaaaacgtgtgtcttctccaccattgctttggactccctcgttcttgagaactta
agtacccagattttgattttggctccgacaagagaaatcgctgttcagatacattcggtt
atcacagccattggaatcaaaatggaaggcctagagtgtcatgtctttattggagggact
ccactatcacaagacaaaaccagacttaaaaattgtcacattgctgttggatctcctggc
agaattaaacaactcatagaacttgactacttgaacccagccagcgtgcgtctttttatt
cttgacgaagcagataagcttttagaagaaggcagcttccaggagcaaataaattggatt
tactcgtctttgcctgccagtaagcagatgttggcagtgtcggcaacataccctgaagtt
ttggctaacgctttgacaaagtacatgagagatcccacttttgtaagattaaattctagc
gatccaagtcttataggtttgaagcagtattataaaattgttaattcctaccctttggct
cataagatttttgaggaaaaggctcaacatttgcaggagctgttcagcagaattccattt
aatcaagccttagtcttttctaatttgcacagtagagcacagcatttggctgagatcctc
tcttcgaaaggttttcctgctgagtgcatatctgggaacatgagtcagaatcagcgtctt
gacgccgtggctaaactgaagcagtttcactgcagggtcctcatctccacagatctgact
tctcgcgggattgatgctgagaaagtgaatctggttgtcaacttggatgtgccattggat
tgggagacatacatgcatcggattggcagagctggtcgttttgggacgttgggactcacg
gtgacctactgttgtcggggcgaagaagagaacatgatgatgaacattgctcagaggtgt
aatctcagccttcttcctcttccagatcccgtccctcctggtctgatggaagagtgctgc
gggcaggatgtgcaggatgtgcaagcgaaggctcctgtgcacgagcatgcctcagcgagc
gcgcctacccaggccgccacggggcaaaccacgcataggatagagaggacctttcagacg
cccaagccccggggggtccagacggcttcatcccggcttacctctgtctccgcccaaccc
aaaagtaccaccagacagaagctgcctgcgaaaagccactcgcactgtggcgtctcagaa
aaagccatgtcacccaaagaaccgggcggctgtgccctgcctccggaagagcagatgagg
gcgtccgagcagcggcctgtcgaaagctccgccagtagtcagcatccgcccgtgtcactg
ccccagattccctgtctgtcttcctttaaggccctcccgctgtgcgcgttgtcttttaca
gagttggtggaggactatgaccattacattcgagagggcttggagaagcctgtggagatc
atcaggcactacaccggccctggggatcccgctgtgagtcaccaaaacggctttgtgaga
cacagagtccccgaagagagagtgcaggtgttggcaagtagtagccagtcgggggactct
gaaagcgacagtgattcttacagctcaaggacttcttcccagagcaaaggcaataagtca
tacttggaaggctcttctgatactcagataaaagatccccggcctactctggtgggtggc
cggactgctctggaacagccccccggtggaaaggacacccccagtctggaggaatatcac
agatcccccgagatccccctaacggcccggcataaaggaggggctcaccagagagcgaag
cagagccgccggaatctttcccggcggtcttcctaccgagcgcaggcagaagcccaggaa
gacagttggtatgactgccaccgggaggcacatccgggtttttctgataactaccaggat
tatgaggagtactggagagcctactacagggcgtggcaggaatactacgccgctgcttcc
cagtcctactactggaatgcgcagagacatcccaactggatggcagcctatcagatgcat
actgtgtacctacaagaaatgatgcgtgctcaccagcgtttatag
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