Echinops telfairi (small Madagascar hedgehog): 101651726
Help
Entry
101651726 CDS
T08707
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101651726 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101651726 (CLP1)
Enzymes [BR:
etf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
101651726 (CLP1)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
101651726 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
ATP_bind_1
TniB
MMR_HSR1
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
101651726
NCBI-ProteinID:
XP_004714965
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaggccaatgacgacaagaagccgacaactaaatttgaactagagagagag
acagaacttcgctttgaggtggaggcatcccagtccgttcagttggagctgctggctggc
atggcagaaatctttggcacagagttaacccggaacaagaaattcacctttgacgctggt
gccaaggtggctgttttcacttggcatggctgttctgtccaactgagtggtcgcactgag
gtggcgtatgtatccaaggatacccctatgctactgtacctcaacacccataccgctctg
gagcagatgcggaggcaggcggagaaggaagaagagcgaggtccccgggtcatggtggtg
ggtcccacggatgtgggcaaatccacagtttgccgtctactactcaactatgcagtgcgt
ctgggccgccgtcccacttacgtggagctggatgtgggtcagggctctgtctccatccct
ggtactatgggggccctctacattgaacggccagccgatgtggaagagggcttctctatt
caggctcctctggtctatcattttggctctaccactcctggtaccaacatcaagctttat
aataagattacatctcgtctggcagatgtgttcaaccaaaggtgtgaggtgaacaggagg
gcctctgtgagtggctgtgtcattaacacctgtggctgggtcaaaggctctggctaccag
gctctggtgcacgcagcctcagcctttgaggtagatgtggttgtggttctggatcaagaa
cggctgtacaacgaactgaaacgggacctaccccactttgtacggactgtgctgctccct
aagtcagggggtgtagttgagcgctccaaggacttcaggcgggaatgtagggatgaacgt
atccgggagtatttctatggattccgaggctgtttctacccccatgccttcaatgtcaag
ttttcagatgtgaaaatctacaaagtcggggcacccaccatcccagactcctgcttgcca
ctgggcatgtctcaggaggataatcaactgaagctagtacctgtcaccccgggccgagat
atggtgcatcacctcctgagtgtaagcactgcggagggcacagaagagaacctttcggag
accagcgttgctggcttcattgtggtgaccagtgtggacctggagcatcaagtgtttact
gtcctctctccagccccccgtccactgcctaagaacttccttctcatcatggatatccga
ttcatggatcttaagtag
DBGET
integrated database retrieval system
