KEGG   Echinops telfairi (small Madagascar hedgehog): 101652009
Entry
101652009         CDS       T08707                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
etf  Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:etf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:etf01009]
    101652009 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:etf04121]
    101652009 (TRIM42)
Protein phosphatases and associated proteins [BR:etf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101652009 (TRIM42)
Ubiquitin system [BR:etf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    101652009 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C CHDCT2
Other DBs
NCBI-GeneID: 101652009
NCBI-ProteinID: XP_004712139
LinkDB
Position
Unknown
AA seq 723 aa
METAMCVCSPCCTWQRCCPRLCSCLCCKFLFTSERNCTCFPCPYKDERNCQCCHCTCAEN
PNCHWCCCSWANDPNCKCCCTTSSNLMCHYYESRCCRNATITFKRGRLKSIRTSSKTALH
FGSSDSQIDLAKQVPGKSHLVDHLTCPLCNRLRLHSFMLPCNHCLCEKCLRQLQKTAEVT
ENFFILICPMCNRSHCMPYSNKMQLPENYLRGRLTKRYMQEHGYLKWRFDRSTGPVQCQV
CRTRRIAHKRCLTCRLNLCNDCLKTFHSDAAMQDHVFVDTSAEDQDEKICIHHPSSRIIE
YCRNDNELLCYFCKTALHNGHDTVSLIDACSERAAALFSAIAKFKAVRYEIDNDLMEFNI
LKNSFKADKELKRKEIRNGFLKLRSILQEKEKIIMEQIENLEVSRQKEIEKYVYVTTMKV
NEMDGLIAYSKEALKETSQVAFLQSAKILVDQIEDGIQSTYRPDPQLRLHSLHCLPLDFV
ELSSAIHELFPSGPKKVCSSGDSLHIPYPVHSEMMITRKVTFSTHSLANQQIYQRSSSLI
SLNNFCEKNKGGLEAYGRAQSSAPAKPVDGLYTYWSAAPESQPVQNSSSVHNWYSFNDGS
TKTPGPLVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYEIITTSSNDVQTELCGQIRDIM
QQNLELHNLTPNTEYLFKVRAINENGPGQWSDICKVVTPDGRGKNKAKWGLLKNIQSALQ
KRF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggagacggctatgtgtgtttgctctccatgttgtacatggcagagatgttgtcctcga
ctgtgctcctgtctgtgctgcaagttcctcttcacctcggagaggaactgcacctgtttc
ccttgcccctacaaggacgagcggaactgccagtgctgccactgcacctgcgccgagaac
cccaactgccactggtgctgctgctcttgggccaatgaccccaactgcaaatgctgctgc
acaaccagtagcaacctcatgtgccactactatgagagccgctgctgccgcaatgccacc
atcacattcaagaggggccgcctcaagagcatccgcacctcttctaagaccgccttgcac
tttgggagcagcgattcccagatcgaccttgcgaaacaagtgccaggaaaaagccaccta
gtcgaccatctcacctgtcccttgtgcaaccggctgcgcctgcactccttcatgctgcct
tgcaaccactgcttgtgtgagaaatgcctgcggcagctgcaaaagacagcggaggtcacc
gagaacttcttcatcctgatctgcccgatgtgcaaccgttctcactgcatgccctacagt
aacaagatgcagcttcctgagaactacctgcgcgggcgcctcactaagcgctacatgcag
gagcatgggtacctcaagtggcgtttcgaccggtccactggccccgtccaatgccaggtc
tgccgcacccggcgcatcgcccacaagcgctgcctcacctgccgcctcaacctgtgcaac
gactgcctcaagaccttccattcggacgcggccatgcaggaccacgtcttcgtggacacc
agcgcggaggaccaggacgagaagatctgcatccaccacccatccagtcgcatcatcgag
tactgccgcaacgacaacgagctgctctgctacttctgcaagactgccttacacaacggc
cacgacaccgtcagccttatcgatgcctgctcagagagggccgctgcactctttagcgcc
atcgctaagttcaaagcagttcgatatgaaattgataatgacttaatggaattcaacatt
ttaaaaaacagctttaaagctgacaaagagttaaagcgaaaggagatcagaaatggattc
ctcaaactgcgcagcattcttcaggagaaagagaaaatcatcatggaacagatagaaaat
ctggaagtgtccaggcagaaagagattgagaaatatgtgtatgtcacaaccatgaaagtg
aacgaaatggacggcctcattgcctactctaaggaggcgttgaaggagacaagccaagtg
gcattcttgcagtctgccaagatcctggtggaccagattgaagacggcatccagagcacc
tacaggcctgacccccagctgcggctgcactccttgcactgcctgcccttggactttgtg
gagctctccagtgccatccatgagctcttcccctcaggacccaagaaggtgtgctcctca
ggggactccctgcacatcccctaccctgtgcattcagaaatgatgattactaggaaggtt
actttcagcacccacagtttagccaaccagcagatataccagcggagctcctccttaata
tccctcaacaacttctgcgagaagaacaagggtggtctggaggcttatgggcgagcccag
tcctctgcccctgctaaacctgtagatggcctgtatacctactggagtgcagccccagaa
agccagcccgtgcagaacagcagcagcgtccacaactggtactcattcaacgatggctct
acgaagaccccaggcccacttgttatctaccagactttggtatatccaagagcagccaag
gtttactggacatgcccaacagaagatgtggactcttttgagatggaattttatgaaatc
attactacctcctctaatgatgtgcagacagagctctgtggacaaattcgggacatcatg
cagcaaaacctggagctacacaacttgactcccaacactgaatatctgtttaaagttaga
gccatcaatgagaatgggcctgggcagtggagtgacatctgcaaggtggtcacaccagat
gggcgtgggaagaacaaagccaagtggggcctgctgaagaacatccagtctgccctccag
aagcgcttctga

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