Echinops telfairi (small Madagascar hedgehog): 101652417
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Entry
101652417 CDS
T08707
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X5
KO
K06842
semaphorin 6
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101652417 (SEMA6D)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
YehQ_C
LapA_dom
Motif
Other DBs
NCBI-GeneID:
101652417
NCBI-ProteinID:
XP_004709468
UniProt:
A0ABM0IWL4
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MKFPLLCAYMLLLMISQRRTLSFPEDIEPLNTIISHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIQDTLYIAGRDQVYTVNLNEIPKAEVIPRKKLTWRSKQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYKLNTLEYDGEEISGLARCPFDPRQTNIALFVD
GKLYSATVADFLASDAVIYRSLGDGSALRTIKYDSKWIKEPHFLHAIEYGNFVYFFFQEI
AVEHNYLDKTLYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVTGESIFYFDVLQSI
TNIIEINGVLAVVGVFTTQLNSIPGSAVCVFSMDDIEKAFKGRFKEQKSPDSLWAAVHES
RVPKPRPGSCAKHGPAENYETSIDFPDDTLTFIKSHSLMDLAVPSIANEPCFTKTRVRYR
LTAIAIDHSAGPYQNYTIIFVGSEAGSVLKILAKTSSFSLNDSVLLEEIEAFNHAKCNAE
NQEDRKVISLQLDLERHVLYVAFSSCVIRIPLSRCELYRSCKKSCLAARDPYCGWLSEGA
CGRVTPGMPADRYEQDVEHGNTTHLGDCHEILPTSTTPDYKIFGGPTSDMEVSSSTLTTM
ASISEITPKVIDSWNPKLTSSRKFVVQDDPNTSDFTDPLSGIPKGVQWEVQSGDSSKTVH
MNVLITCVFAAFALGAIIAGVAVYCYRGMHVRKSRKIHKDAESAQSCTDSNGSFAKLNGL
FDSPVKEYQQNIDSPKLYTNLLTSRKELPPSGDTKSMVVDLRGQPPELAALPTPESTPVL
HQKTVQPVKSQSDKVHGHRASRKETSQFFPSSPPSHSSLGHGHIPSAIVLPNATHDYNTS
FSNSNAHKAEKKLPHTDHPVPNASSKRDHRRSVDSRNTLNDLLKHLSDPNSNPKAIMGDI
QRAHQTLMLDPVGTMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLER
QRGYHKNSSQRHSISAMPKNVNSPNGVLLSRQPSINRGGYMATPTGAKVDFIQGTPVSVH
LQPSLSRQSSYTSNGTLPRTGLKRTLSLKPDVPPKPSFVPQATSVRPLNKYTY
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccccttactctgtgcctacatgctattgcttatgatttcccagcggaggacc
ctcagcttcccggaggacattgaacccctgaacaccatcatctctcactattcaaggcaa
tatccggttttccgggggcgcccttcaggcaatgaatcgcagcacaggctggactttcag
ctgatgttgaaaattcaagacacactttatattgctggcagggatcaagtttataccgtg
aacttaaatgaaatccccaaagcagaggtcataccaagaaagaaactgacgtggcgatcc
aagcagcaggaccgagagaactgtgctatgaaaggcaagcataaggacgaatgccacaac
tttatcaaagtgtttgttccgaggaacgatgagatggtttttgtctgtgggaccaatgcg
tttaaccccatgtgtcgatactacaagttgaataccttagagtacgatggggaagaaatc
agtggcctggcacgatgcccgtttgatcccagacaaaccaacattgccctctttgtcgac
gggaagctgtattccgccacagtggctgacttcttggctagtgatgctgtgatttatcga
agcttgggtgatggctctgctcttcgcacaattaaatatgattccaaatggataaaagag
ccacacttccttcatgccattgagtatggaaactttgtctatttcttctttcaagaaatt
gctgtagaacataattatttggacaagactctctattcccgtgtggcccgtatatgtaag
aacgacatgggcggctcccagcgggtcctggaaaaacactggacttcatttctaaaggct
cggctgaactgttctgtcaccggagagtcgattttctactttgatgtgctgcagtcgatt
acgaacattatagaaatcaatggcgttctcgctgtggtcggggtgttcaccacacaactc
aacagcattccaggttctgctgtctgcgtgtttagcatggatgacattgaaaaggcattc
aaagggaggtttaaagagcagaaatcgcctgattctctttgggcagccgtccatgaaagc
agagtcccgaagccaaggcctggctcttgtgccaagcatggccctgcagaaaactatgaa
acctccatcgatttccctgacgacaccttgacgttcatcaagtcgcactcgctgatggac
ttggccgttccatccattgccaacgagccctgtttcaccaagacacgggtcaggtatcga
ctgaccgccattgccatcgatcattccgccggaccctaccagaactacaccatcatcttt
gttggctctgaagctggcagtgttcttaaaattttagcaaagaccagctccttctctttg
aatgacagcgtattactggaagagattgaagctttcaaccatgccaagtgcaatgctgag
aatcaggaggaccgaaaagtcatctccctccagttggacctagagcgccacgtcttatac
gtggcattctctagctgcgtgattcggattcccctcagtcgctgtgagctctatagatcc
tgtaaaaagtcttgccttgcagcccgtgacccatactgtggctggttaagcgagggagcc
tgtggtagagtgaccccggggatgcccgcggaccgatatgagcaagacgttgaacatggc
aacacgactcacctgggggactgccatgaaattttgcctacttcaactacaccagattac
aaaatatttggaggtccaacatctgacatggaggtatcttcgtctactcttactacaatg
gcaagtatctcagaaatcacacctaaagtgattgattcctggaatcctaaactgacgagc
tcccggaaatttgtagttcaagatgaccccaatacttctgattttactgatcctttatca
ggtatcccaaagggtgtccaatgggaagtgcagtcgggggactccagcaagacggtccac
atgaatgtgctcatcacctgcgtctttgccgcatttgccttgggtgcgatcattgcgggc
gtggcagtctattgctaccgcggcatgcatgtccggaaatccagaaagatccataaagat
gccgaatctgcccagtcatgcacagactccaatggaagttttgccaaactaaatggtctc
ttcgacagccccgttaaagaataccaacagaacatcgattcgcccaaactgtatactaac
ctgctgaccagtcggaaagagctgcctcccagtggagacacgaaatccatggtagtggat
cttcgaggtcaaccacccgagctggctgccctccccacacccgagtctacaccggtgctg
caccagaagaccgtgcagcccgtgaagagccagtccgacaaggtccatggccacagggca
tccaggaaagaaacctcccagttcttcccttccagccctccatcccactcctcactcggt
cacggccatatccctagtgctatcgtgctgccgaatgccactcacgattacaacacatcc
ttctcaaactccaacgctcacaaagcggaaaagaaactcccacacactgaccatcctgtg
ccaaacgcatccagcaaacgggatcaccggcgctctgtggattccaggaacaccctcaac
gatctcctgaaacatctaagcgacccgaacagtaaccccaaagccatcatgggagatatc
caaagggcgcaccagaccctcatgctggatcctgtgggaacgatgtctgaggttccgccc
aaggtccccaaccgggaggcctcgctctactctcccccttccactctccccagaaatagc
cccaccaagcgagtggacgtccccaccactcccggggtcccaatgacttctctggaaaga
cagaggggttatcacaaaaattcctcccaaaggcactccatatctgctatgcctaaaaac
gtgaactcaccgaatggtgttttgctatccagacagcctagtattaaccgtggaggatac
atggccaccccgacgggggcaaaggtggattttattcaggggacacctgtgagtgtccac
ctgcagccttctctctccagacagagcagctataccagtaatggcaccctcccgaggacg
ggactaaagaggacactgtccttaaaacctgatgtgccaccaaagccttcatttgttcct
caagccacatcagtcaggccactgaacaaatacacttactag
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