Echinops telfairi (small Madagascar hedgehog): 101652664
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Entry
101652664 CDS
T08707
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101652664 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etf03400
]
101652664 (RAD54B)
DNA repair and recombination proteins [BR:
etf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
101652664 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
DUF5529
Motif
Other DBs
NCBI-GeneID:
101652664
NCBI-ProteinID:
XP_045143275
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MRRSVAPSQLQGNPSKKPKFIPPGRSNPNPNGEITKLSPDTKLYEVAANKSENDFRTGNL
SLLHAKETTREMNHKDTRSGKCFPESSLMPALGPLQTVHPAPTEVTAFKAKEKEPDNLVK
YFNVVWCKASKKKHKKWEGDAVLIVKGRSLTLKDLEGKDIGKGIGYKVKDLEKIDEGQTL
VIGGKEIEVMGIISPDDFDSGKCFQRGVGSPTVSSFQAAKKCFSIPFKSVGKPDSKAHTQ
NEFQNCKPRHDPHAPNSLVMPRPNKNHQWMFNKNCCPVVDVVADPHLVCHLRPHQKGGII
FLYECVMGMRMSGKCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGS
LVNNWGKEFQKWLGSERIKIFTVDQDHKVEEFIISPLYSVLIISYEMLLRSLDQVRNIKF
DLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGTL
SSYRKIYEEPIIISRDPSASEEEKNFGERRAAELTRLTGLFILRRTQEVINKYLPPKIEN
VVFCQPGPLQIELYRKLLNSKAVSFCLQGLLENSSHLICIGALKKLCNHPCLLFKSIKEK
ECSSTCDGNEDRHLYEGLRTAFPNDYSPLTCAEGESGKLQVLSKLLAVIHELRPSEKVVL
VSNYTQTLNILQEVCQRHGYAYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGV
GLNLIGGSHLILYDIDWNPATDIQVVSLQLCPENLRDHESSLLFPPISTVPKVMAIKLIP
ILSDPPEQVELSLEVFTLSHEAVVSGDGLDGRTVRRQYSMQMEGLYDRTGQEARPSLIPK
GSSESEIPSNVKVGKGAVFAAQGSKDRSGSVEVLNAWAFV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatctgtagcaccaagtcagttgcaggggaatccctcgaaaaaaccaaaattt
ataccaccaggcagaagtaatccaaacccgaatggagagattacaaagctgagtccagat
acaaaattatatgaggttgctgcaaataagtcagaaaatgatttcagaactggtaattta
agtcttctgcatgctaaagagactacaagagaaatgaatcacaaggatactcgcagtgga
aaatgttttcctgaatcatctctgatgccagcattaggtccacttcagacagttcatcca
gccccaacagaagtgacagcgttcaaggcaaaagaaaaggaacctgataatctcgttaaa
tatttcaatgttgtttggtgtaaggcttcaaagaaaaaacacaagaagtgggaaggtgat
gctgttcttattgtaaagggcaggtcacttacattaaaggatttggaaggcaaagacatt
ggaaaaggcattggatataaagtcaaagatcttgaaaagattgatgaaggtcaaacgcta
gtgattggtggaaaagaaatagaagtcatgggtataatctctccagacgactttgacagt
ggcaaatgttttcagcgtggagtaggaagccctactgtctcatcttttcaggctgccaag
aagtgtttctctatccctttcaaaagtgtcggcaaaccagactcaaaggcacatacacag
aatgaattccaaaattgtaaaccacgccatgacccacatgcaccaaattccctagttatg
ccacggccaaacaagaaccaccagtggatgttcaataagaactgctgccctgttgtggat
gtagtggcagaccctcaccttgtatgtcatcttcgaccacatcagaaaggtggaatcatc
ttcctttatgaatgcgtgatgggaatgagaatgagtggcaaatgtggagctattcttgct
gatgaaatgggcttaggaaaaacactgcaatgtatttccctcatctggactctacaatgc
caggggccctatggaggcaagccagtcataaagaagacactgattgttacccctggaagc
ttggtgaataattgggggaaggaatttcaaaagtggctgggaagtgaaaggatcaagata
tttactgttgatcaggaccacaaggtagaagaattcatcatatctccattatattctgtt
cttatcatcagttatgaaatgttacttcgctccctggatcaagttaggaacataaaattt
gatcttctaatctgtgacgaagggcatcgtttgaagaacagtgctattaagacaactaca
gctctcattagcctctcttgtgagaaaagaataattcttactggtactcccgttcaaaat
gatctgcaggaattttttgcattaattgattttgtaaatccaggcatattaggtactttg
tcatcgtacagaaaaatatatgaagaacctatcattatatcaagagacccttctgcttct
gaggaggaaaagaatttcggagagaggagagcagcggaacttactcgcctcactggactc
tttatccttagaaggacccaggaagtcataaataagtaccttccacctaaaatagagaat
gtggtcttttgccaaccaggaccactgcagattgaactttatcgaaagctgttgaattca
aaggctgtcagtttctgtcttcaaggactgttggaaaatagctctcatctaatatgtata
ggagctctgaaaaaactgtgcaaccatccctgccttttgttcaagtctataaaggaaaaa
gaatgtagctcaacctgtgatggaaatgaagacaggcacctgtatgaaggtttgcgcact
gcgttccccaatgactacagtcccctcacgtgtgccgagggggagtcggggaaactgcag
gtgttgtccaagctcctggcagttatccatgagcttcgtccttcggaaaaggtggtatta
gtatctaactacacgcaaaccttgaatattttacaagaagtatgccagcgccatggatat
gcttacacaaggctggatgggcaaacgccaatctctcaaaggcagcagattgttgacggt
ttcaatagtaaatactcctccgattttatttttttgttaagttccaaggctggtggtgtg
ggacttaatcttattggaggctctcacttaattctctatgacattgattggaatccagcc
actgacatccaggttgtgtccctacagctttgccctgagaatctcagagatcatgaatcc
agtcttctttttcctcccatatcaaccgtacccaaagtcatggccatcaaattgattcct
attctgagtgaccctccagaacaggtcgaactgtccctggaagtgtttactctgtcacat
gaggccgtggtgagtggggatggcctcgatggcaggacagtaaggagacagtacagcatg
cagatggaggggctctatgacaggactgggcaagaagccaggccttcattgattccgaag
gggagttctgagagtgaaattccaagcaatgtcaaggttggaaagggagctgtttttgct
gcccagggctctaaggaccggagtggcagtgtggaggtgttgaacgcatgggctttcgtg
tga
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