Echinops telfairi (small Madagascar hedgehog): 101652706
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Entry
101652706 CDS
T08707
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101652706 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101652706 (WDR33)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101652706 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Collagen
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
101652706
NCBI-ProteinID:
XP_004703921
UniProt:
A0ABM0IN76
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPSEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQSFPGQGPMSQIPQG
FQQPHPSQPMPINMAQMGPPGPQGQFRPPGPQGPPGPPLHQGGGGPQGFMGPQGPQGPPQ
GLPRPQDMHGPQGMPRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQSHIGPQGPP
GPQGHLGPQGPPGPQGMQGPPGPRGIQGPPHPHGLQGGPGSQAIQGPVSQGPLMGLNPRG
MQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPPPQG
SMLGPPQELRGPPGAQSQQGPLQGSLGPPPQGGLQGLPGPQGQQNPARGPHPSQGPIPFQ
QQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNSGQGPGPNKGDSRGPP
NHHMGPMPERRHDQSSGPDHGPERGPFRGGQDCRGPPDRRGSHPEFPDDFSRPDDFHPDK
RFGHRLREFEGRGGPLPQEEKWRRGCPGPPFPPDHRDFSEGDGRGVARGPPGAWEGRRPG
DERFPRDPEDPRFRGRREESFRRGAPQRHEGRAPPRGRDGFPGPEDFGPEENFDGSDEAA
RGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPRPDH
PSHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRASKGRG
GPGSSQRVPKSGRPSSLDGDHHDGYHRDEPFGGPSGSGTPSRGGRSGGSNWGRGNNMNSG
PPRRGASRGGGRGR
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctccacgttttttccatatgccaaggttccaacaccag
gcacctcgacagttattttataagcgacctgattttgcacaacaacaagcaatgcaacag
cttaccttcgatggaaaacgaatgagaaaagctgtaaatcgaaaaaccatagactacaat
ccatctgtaattaaatatttagagaatagaatatggcaaagagaccagagagatatgagg
gcaattcagcctgatgcgggttattataatgatttggtcccacctataggaatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttagaacatcaacaaacaaagtgaagtgt
ccagtgtttgttgttaggtggactccagaaggaagacggttggtaactggagcttctagt
ggagagtttaccttgtggaatggacttactttcaattttgaaacaatattgcaggctcac
gatagcccagtaagggctatgacttggtcacataatgacatgtggatgttgacagcagac
cacggaggatatgtgaaatactggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctg
cgagggcatggtgctgatgtgaaatgtgtagactggcatccaacaaaaggattagttgtc
tcaggaagtaaagatagtcaacagccaataaagttctgggatcctaagactgggcagagc
cttgcaacacttcatgcccataaaaacacagtaatggaagtaaaattgaatctcaatggc
aattggctactcacagcatcacgtgaccacctctgcaaactttttgatatcaggaacttg
aaagaggagcttcaagtcttccgaggtcataagaaagaagccacagctgtggcttggcat
cctgttcatgaaggactttttgccagtggagggtctgatggttctttgttattctggcat
gttggggtggagaaggaagtgggtggaatggagatggcccatgaaggaatgatctggagt
ctggcatggcaccctcttggacatatcctttgttcaggctccaatgaccatactagcaaa
ttttggactcgtaatagaccaggtgataaaatgcgagatcgatataatttaaatctacta
cctggcatgtctgaagatggagtagaatatgatgaccttgaacctaatagcctggctgta
attccaggaatgggaataccagagcaactaaaattagctatggaacaagagcagatgggt
aaagatgaatcaaatgaaatagaaatgacaattccaggtttagattggggaatggaggag
gtgatgcaaaaggatcaaaaaaaagtacctcagaagaaagttccatatgcaaagcccatt
cctgctcagttccagcaagcttggatgcaaaataaagttccaattcctgctcccagtgag
gtactgaatgacagaaaagaggacattaagttggaagaaaagaagaaaacacaagcagaa
attgagcaagaaatggccaccttgcagtataccaacccacaacttctagagcaactgaaa
attgaaagacttgcacagaaacaggctgaacagatccagccacctccctcatctggcact
cctctccttggaccccagtcatttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacagccccatccctctcagccgatgccaataaacatggctcaaatggggccacct
ggtccacagggacaatttagacctcctggaccacagggaccaccaggccctccactgcat
cagggaggtggggggccccaaggattcatgggaccacaggggccgcagggcccaccccag
ggattgcccaggcctcaggacatgcatggaccccaaggaatgccaaggcaccctggacct
catggccccttgggacctcaaggaccacctggacctcaaggtagttctggtcctcaaggt
catatgggccctcagggcccacctggtcctcagagtcatataggaccccagggcccacct
ggtccccagggtcatttgggccctcagggaccacctggtcctcaaggaatgcagggacca
cctggtcccagagggatacaaggacctcctcatcctcatgggttacaaggtggaccagga
tctcaagcaatccaaggtcctgtatctcagggacctctgatgggactgaatccacgagga
atgcagggccccccaggcccccgagagaatcaaggtcctgctccccaagggatgatgatg
ggccacccacctcaagagatgagaggacctcaccctccaagtggactgctgggacatggc
cctcaggagatgcgagggcctcaagagatgcgagggatgcaggggcctccacctcaagga
tcaatgctgggtcctccccaagaattacgggggcctccaggtgcacaaagtcagcagggg
ccactgcagggctccttgggacctccacctcagggtggcctgcaagggcttcctggacct
caggggcagcagaacccagcaagagggccacatccatctcaagggccaataccattccag
cagcagaaaacagctctgctaggtgatgggccccgggcccctttcaatcaggaaggacag
aacgcaggccccccacccctgataccaggcctagggcagcagggagcacaaggtcgaatt
ccccctcttaattctggacaaggacctggccctaataaaggtgactcccgaggccctccg
aatcatcacatggggcccatgccagagaggcggcatgaccagagcagtggacccgaccat
ggccctgagaggggaccttttcgggggggccaggactgcaggggccccccagacaggcga
ggctctcaccccgagttccctgatgacttcagcagaccagatgacttccaccctgacaag
cgctttggccacaggttacgtgaatttgaggggcgaggaggacctttaccgcaagaagag
aagtggaggcgagggtgccctgggcctccatttcctcctgatcacagagacttcagtgaa
ggagacggccggggtgttgctcgaggccccccaggggcatgggaaggccgtagacctgga
gatgaaagattccctcgtgatcctgaggacccacgttttcgagggcgcagagaagaaagt
tttaggagaggagccccccagagacatgagggccgtgctcctcccagaggaagagatggg
tttcctggtcctgaagactttggtccagaagagaattttgatggttctgatgaagcagcc
cgaggaagagatctcaggggtcgaggtcggggcacaccacgaggaggaaggaagggttta
cttcccactcctgatgaattccctcgctttgaaggaggacggaaacccgactcatgggat
ggaaatagagagccagggccaggccatgaacatttccgtgatgctccccgtcctgatcat
ccctctcatgatggtcactctccagctagcagagaacggtcgtcttctcttcaaggcatg
gacatggcatctctgccaccccgaaagcgcccctggcatgatgggcctgggacctctgag
cacagagaaatggaagcccctggggggccttctgaggatcgagccagcaaaggccgaggt
ggcccaggatcttcgcagagagtgccaaaatctgggcgtcccagttccttggatggagat
catcatgatggttaccaccgagacgaacctttcgggggcccttcaggcagtggcacccct
tctagaggtggcaggagtggtggcagtaactggggtcgagggaataacatgaattctggc
ccaccgaggcgaggagcctcaaggggtggagggagaggccggtag
DBGET
integrated database retrieval system
