Echinops telfairi (small Madagascar hedgehog): 101652960
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Entry
101652960 CDS
T08707
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03015
mRNA surveillance pathway
etf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101652960 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
101652960 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101652960 (PABPC4L)
03041 Spliceosome [BR:
etf03041
]
101652960 (PABPC4L)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101652960 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
101652960 (PABPC4L)
Spliceosome [BR:
etf03041
]
Complex C
Other components
Complex C specific factors
101652960 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
RBD_DEAH11
RRM_MARF1
RRM_3
RBD_RDR6
ATP-grasp_2
DUF8085
Motif
Other DBs
NCBI-GeneID:
101652960
NCBI-ProteinID:
XP_004712201
UniProt:
A0ABM0J0M7
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MNVSAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLL
LADAQKALDTMNFDEIKGKSIRLMWSQRDAYLRKSGIGNIFIKNLDKSIDNKALYELFSP
FGKILSSKVMTDDQGSKGYAFVHFQNQIAADRAIEEMNGVLLRSCRLSVSRFKTRKDREA
ELRNKSNEFTNVYIKNFGVCMDEKRLKDIFSQYGTTLSVKVMTDSCGKSKGFGFVSFDSH
ESAKKAVEEMNGKELNGQLIFVSRAQKKIERQAELKQMFQQIRQERIHWSQGVKLYIKNL
DDTIDDEKLRKEFSSFGSVSRVKVMREDGRSKGFGLICFSSLQEATTAMAEMNGRFLGTK
PLNIALAQRQEERKPCFTSQYLL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtcagccaagtaccgcatggcctcgctgtatgtgggtgacctacatgccgat
gtcaccgaggacctgctgttcaggaagttcagcaccgtggggcctgtgctatccatccgc
atttgcagagacctggtcacccgccgctccttgggctacgcctatgtgaacttcctgctg
ttggcggatgctcagaaagccctggacaccatgaactttgatgagattaaaggcaaatcc
atccgtctcatgtggtcccaacgtgatgcctacttaaggaaatctggaattgggaacatc
ttcatcaagaatctggataaatccattgataacaaagccctttatgaactgttttcacct
tttgggaagattctgtcgtccaaggtgatgacagatgatcaaggctccaaaggttacgct
tttgtacactttcagaaccagatcgctgcagacagggccattgaggagatgaatggggta
ttgctcaggagttgcagattgtctgttagcaggttcaagacccgcaaagatcgagaagcc
gagctcagaaacaaaagcaatgagttcaccaatgtttacattaaaaactttggggtttgc
atggacgagaagagactgaaggacattttcagccaatatggtacaactctgagtgttaag
gtgatgactgattcctgtggaaaatccaaaggtttcggctttgtgagttttgatagccac
gagtctgccaaaaaggcggtggaagaaatgaatggaaaggaactaaacgggcagctgatc
tttgtaagccgagcgcaaaagaaaattgagcgacaagctgagttaaagcaaatgtttcaa
cagataagacaagaaagaattcactggagccagggcgtgaagctctatattaagaacctt
gatgacaccattgatgatgaaaaactacggaaggaattttcttcatttggatcagttagc
agagttaaggtgatgcgggaagacggtagaagtaaagggtttgggttgatctgcttttcc
tccctccaggaggctaccacagcgatggctgagatgaatggccgcttcttggggaccaag
cccctcaacattgccctggcacagaggcaagaagaaaggaaaccatgcttcaccagccaa
tatttgctgtag
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integrated database retrieval system
