KEGG   Echinops telfairi (small Madagascar hedgehog): 101653026
Entry
101653026         CDS       T08707                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
etf  Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03020  RNA polymerase
etf03420  Nucleotide excision repair
etf05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:etf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101653026 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101653026 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    101653026 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:etf03021]
    101653026 (POLR2D)
   03400 DNA repair and recombination proteins [BR:etf03400]
    101653026 (POLR2D)
Transcription machinery [BR:etf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101653026 (POLR2D)
DNA repair and recombination proteins [BR:etf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101653026 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 101653026
NCBI-ProteinID: XP_004703922
LinkDB
Position
Unknown
AA seq 142 aa
MAAGGGDSRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggcggcggggactcgcgggctggggacgtggaggaagacgcctcgcagttg
atctttcccaaagagtttgaaacagctgagacacttctcaattcagaagtccatatgctt
ctcgagcatcgaaagcagcagaatgagagtgcagaagacgaacaggagctctcagaagtc
ttcatgaaaacgttaaactacacagcccgcttcagtcgtttcaaaaacagagaaaccatt
gccagtgtccgcagcttgttgctccagaaaaagcttcataagtttgaattggcgtgtttg
gctaatctgtgtccagagactgctgaggagtccaaggccctgataccaagcttggaaggg
cggtttgaagatgaagagctgcagcagattcttgatgatatccagacaaagcgtagtttt
cagtattaa

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