Echinops telfairi (small Madagascar hedgehog): 101653219
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Entry
101653219 CDS
T08707
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101653219 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etf03036
]
101653219 (JMJD1C)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
101653219 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
C1_2
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
101653219
NCBI-ProteinID:
XP_045147498
LinkDB
All DBs
Position
Unknown
AA seq
2330 aa
AA seq
DB search
MQGPYSLNGYRVKVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRASQNNNTVHGHYTRAQANSPRPAMNSQAAVPKQNTHQ
QQRNIRPHKRKGSDSSIPDEEKIKEEKNDYITRGENAKSKNKHLMNKRRKPEEDEKKPNL
KRLRTDNASDFSESSDSENSNKRMTDNSSEQKSDNDLKNKNTSKINGEEGKPQNNEKAGE
KTLIINSQTPWDQTQEDKHEEVEKLKSVDAHLQEKKITHLSEQATLSDHNPNDLLLPECN
MEKTHTVEFVPKEKYASRPPTPKCVIDITNDTTSQKVAQEKSSTFGLQTLQKTDSNVGDS
KHSISNTKYMETKQDSDQSWVSDVIKVDLTQSNINATSGKDHPNLEKEKTQYASYMTSLN
AVSVTDDNKLHKRSPPPETIKSKLNTSVDTPKTKSALSPEVVKSKISHSPDSIMSKTTYT
NSQATGERRLASKIEHVLSRCSFHPVPTRGSALESTKSPLIIDKNEHFTVYRDPALIGPE
PGANHISPFLNQHPFPLHSSSHRTCLNPGVHHPALTPAPHILAGSSSQTQLPTINTHPLT
SGPHHSVHHPHLLPTVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQLLQHQSPH
LLGQAHPASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNTEASLRRNSPSPW
LHQPTPVTSADGIGLLSHVPVRPSSAEPHRPLKITAHSSPPLTKTLIDHHKEDLERKAFI
EPLRSVASTSAKNDLDSNRPQTGKDGLLHRHFVDPLLNQLQRPPQETGERLNKYKEEHRR
ILQESIDVAPFTTKIKGLESERDNYTRVASSCSSPKSHIIKQDKDLERSVSDLYKMKHSV
SQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSYTEKQSSSLAAAANPQTLTSYISSLSKPP
PLIRHQTETEGLVGKIPEHLPHQIASHSVTTFRNDSRSPTHLTVSSTNTLRSMPALHRAP
VFHPPIHHSVERKESSYSNLSPPTLTPVMPVNAGGKAQESQKPPTLIPEPKDSQANFKSS
EQSLTEMWKSNNLSKEKAEWHVEKSIGKSQAAMASVIVRPPSSTKYESISSMQLASKDRL
SEKSSTEANQTDCLKPAETGETGRIILPFMNSDNAHIKSEKVFLSVSHGSVPSSVMSAVN
TTCHPKTDVFTSAVSTTTSSSWGGSEVIYSLSNTILASTSLECTSSKSVSQSVSWAQECK
VSTTASVTPTGSKTGSAVQPSSGFSGTTDFIHLKKHKAALAAAQYKSSNVSEAEPNAVKS
QTSSASVPLESTVVCRTINKANSVGNGQTSQTSQPNCHTKLKKAWLTRHSEEDKNTNKME
SPGHSVSEIIKPCSVNLIASTSNDIQNSVDSKIIVDKYIRDDKVSRRKAKRTYESGSESG
DSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEVEEDSKPNGVLSRSAKEKSKLKLQSN
NNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLFRSKKGEEPTHS
PVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAISLWTHENYEDDELDIETSKYILDV
IGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVC
LDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAVHMLREKFG
IKSHCHCTNKQNIQVGNFCSMNGMTQDQNTPQKYETNGNSSPGSDVSTDSKLTPPESQSP
LHWLADLAEQKAREEKKENKECALEKSMKEEQEQNPSSPNCRASPSVSQSNEQGSTLRDL
LTTTAGKLRVGSTDAGIAFAPVYSMGTPSSKSGRSMPNILDDIIASVVENKIPPNKASKI
NVKSELKEEPKESKKCAMNENKVYSDIPHSWICEKHILWLKDYKNGNNWKLFKECWRQGQ
PALVSGVHKKMNTSLWKAESIGLDFGDQQADLLNCKDSITSNGNVKEFWDGFEEVSKRQK
TQSGETVVLKLKDCPSGEDFKTMMPARYEDLLKSLPLPEYCSPEGKFNLASHLPGFFVRP
DLGPRLCSAYGVAAAKDHDIGTTNLHIEVSDVVNILVHVGIAKGNGVLSKAGILKKFEEE
DLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWY
VNKKLRQRLLEEHGVRTFTLIQFLGDAIVLPAGALHQVQNFHSCIQITEDFVSPEHLVHS
FHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVRALKIHESEIEDMEEN
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccttattccttaaatggatacagagtaaaagtatatagacaagactctgcc
acccagtggtttactggcataattactcatcatgatctcttcacccgcaccatgatcgtt
atgaatgatcaggtattagaaccacagaatgtcgatccttctatggttcaaatgaccttt
ctagatgatgttgttcactctttgttaaaaggagaaaatattggcattacatcacgacgt
aggtctcgcgccagtcaaaacaacaacactgttcacggccattatacacgtgcccaagca
aatagtcccagaccagccatgaactcccaagctgcagtaccaaaacagaatacacaccag
caacaaagaaatattcgtccacataagagaaagggctcagatagcagcataccagatgaa
gagaagataaaggaggaaaaaaatgattatataacgagaggagaaaatgctaaaagtaaa
aacaaacacttgatgaataaaagaaggaagccggaggaggatgagaagaaacccaatttg
aaaagactgcggactgacaatgcttcagatttttctgagagcagtgattcagaaaattca
aataagagaatgacagataattcttcagagcaaaagtcagacaatgatttgaaaaataaa
aacacttcaaagataaatggagaagaaggaaaacctcagaataatgagaaggcaggggag
aagacactaataataaatagccagactccctgggatcaaacacaggaagataaacatgaa
gaagtagagaagctgaagtcagttgacgctcaccttcaagaaaaaaagattacccattta
tcagaacaggctacgctttctgatcataatcctaatgatttacttcttccggaatgcaat
atggaaaagacacatacagtggaattcgttccaaaggagaagtacgcatccagaccgcct
acaccaaagtgtgttatagatatcacaaatgacactacttcacaaaaggtggctcaggaa
aagtcaagtacctttggccttcagacacttcagaaaacagattctaatgttggtgactca
aagcattctatttcaaatacaaaatacatggaaacaaagcaagattctgatcagagctgg
gtcagtgatgttattaaagtggacttaacccagtcaaatataaatgctacttcaggaaaa
gatcacccgaatttggaaaaagagaaaacccaatatgcctcttacatgacatctttaaat
gccgtttctgtcacagatgataataagctgcataaacgaagtccacccccagagaccata
aaatctaaacttaatacatctgtagatactcccaagacaaaatctgctctttcacctgaa
gttgttaaatccaaaattagccattctcctgactcaataatgtctaagactacttatacc
aacagccaagctactggtgaaagaagactggcaagtaagatagaacatgtattatcaaga
tgcagctttcatccagttcccactcgaggcagtgcattggaatctacaaagagtccgctt
atcattgataaaaatgagcatttcacagtttaccgagatcctgcacttattgggccagaa
ccaggagctaatcacatttcacctttcttaaaccagcatccttttcctcttcattcctca
tcccatagaacttgtttaaatccaggtgtccatcacccagccttaactcctgcaccccac
atattagctggatcctccagtcaaactcagttacctaccattaacactcaccctctgact
agtggcccacaccactctgttcatcatcctcatttacttccaactgtgttacccggagtg
cctgctgcttccttacttggtggccacccacgattagagactgctcatgccagcagctta
agccacttagcactagcacaccagcaacagcagcaattattacagcaccagtcacctcat
cttcttggacaagcccaccctgcttcatataatcaacttggactttatccaattatttgg
cagtacccaaatggaacacatgcatactcaggacttggtttaccttcttctaaatgggtt
cacccagaaaatgcagttaacaccgaagcttccttaagaaggaattcgcccagtccttgg
ttacatcagcccactcctgtgacctcagctgatggtattgggttacttagtcacgttcct
gtcagaccttctagtgcagaacctcatcgtcctcttaaaattacagcacattccagtcca
ccactgacaaaaaccttaatagatcatcacaaagaagacttggagagaaaggcttttatt
gaacctttacgatctgttgcatccacatcagcaaaaaatgacctggattcaaataggcca
cagactggaaaggatggtcttttgcacaggcattttgtggatccattattgaatcaatta
caaaggccacctcaggagactggagaaaggttaaacaaatataaagaggaacaccgtcga
attcttcaagaaagtattgatgttgctccctttacaactaaaatcaaagggcttgagagt
gagagagataattataccagagtggcatcatcatgttctagtcctaaaagtcacatcatc
aaacaagacaaagatttagagcgctcagtatcagatctttataaaatgaagcactcagtg
tctcagagtctgccccaaagtaactatttcactacactgtctaatagtgtagtcaatgaa
ccaccaagatcatacccatccaaagaagtttcttacacagagaagcagagtagtagcctt
gcagcagcagctaatcctcaaactttgacttcatatatatcatctctttcaaagcctcca
cctctgattagacaccaaacagaaacggaaggtttagtaggcaaaataccagaacatctt
cctcatcaaattgcatctcactctgtcacaaccttcagaaatgacagtaggagtcctacc
catttgacagtttcttctacaaatacactccgaagtatgcctgctttacatagagcacca
gtatttcatccaccaatccatcacagtgtggaaagaaaggaaagcagctatagtaacctt
tcccctccaactttaactccagtgatgccagtaaatgctggtgggaaagctcaagagtcc
caaaagccaccaactctaatacctgagcccaaagactctcaagcaaatttcaagagttct
gaacagagtttgacagaaatgtggaaatctaataacctcagcaaagagaaagctgaatgg
cacgtggaaaaaagcattggaaagtcacaggctgctatggcatctgtcattgtacgtcca
ccttctagtacaaaatatgaaagcatatcttcaatgcagttagcttccaaagatcgactt
agtgaaaaatcttcaactgaggcaaatcaaacagattgcctgaaaccagcagaaactggg
gagaccggaagaatcattctgccttttatgaattcagacaatgctcacataaaatctgaa
aaagtttttctgtctgtctcacacggcagtgttcccagttcagttatgtctgctgtaaat
acgacgtgtcatccgaaaacagatgtttttacatctgctgtctctaccaccactagttcc
agttggggtggttcagaagtaatatactctttatcaaataccattttggcctctacatcc
ttagaatgtacttcctcaaaaagtgtcagtcagtcagtgtcttgggcacaagaatgcaaa
gtcagcaccacagcttcagttacaccaactggtagtaaaacaggaagtgctgttcagccc
agctctgggttctcaggcacaactgattttatccatttaaaaaagcacaaggcagccttg
gctgctgctcaatataagagtagtaatgttagtgaggctgagcctaatgctgtgaaaagt
cagacctcttcagcctctgtgcccttggaaagcactgtggtctgtaggacaataaacaaa
gcaaactctgtcggaaatgggcaaacatcccagacaagtcaaccaaactgccatactaaa
ctgaaaaaggcctggcttactagacattcagaagaagataaaaacactaataaaatggaa
agtccaggacactccgtatcagaaataattaagccatgttctgtcaacttaatagcctct
acgtctaatgatattcaaaatagtgtagatagcaagatcatagttgataaatatataaga
gatgataaagtcagtaggagaaaagccaaaagaacttatgaatccggctctgaaagtggt
gactctgatgaaagtgaaagcaaatcagagcaaaggactaaaaggcaacctaagccaact
tataaaaagaagcaaaatgatttgcagaaaagaaaaggtgaagtagaagaagattcgaaa
cctaatggggttctcagcaggagtgcaaaagaaaaaagtaaattgaagttgcagagcaac
aacaatagtgctggcatccctcgctcagtattaaaagattggcgtaaagtcaagaagcta
aaacaaactggggagtcctttctacaggatgactcctgctgtgagataggacctaattta
cagaagtgccgagaatgtagactttttcggagtaaaaaaggagaagagccaactcactca
ccagtgttttgtaggttttactactttagaagattgtcctttagtaaaaatggagtggtt
cgtatagatgggttttcttctcctgaccaatatgatgatgaagctataagtttatggaca
catgaaaattatgaagatgatgaactagacatagaaacatctaaatatatactggatgta
ataggtgataagttctgtcaactagtaacatctgagaaaactgctttatcctgggtaaaa
aaggatgccaaaattgcttggaaaagagcagtacgaggcgttcgggagatgtgtgatgct
tgtgaagcaacattgtttaacattcattgggtctgccaaaaatgtggatttgtggtttgc
ttagattgttataaggcaaaagaaaggaagagttctagagataaggagctctatgcttgg
atgaagtgtgtgaagggacagcctcatgaccacaagcatttaatgccgactcagattata
cctggttctgttttgacagatcttttagatgcagtgcacatgcttagagaaaaatttggt
ataaaatcccactgtcattgtactaacaagcagaatatacaagttggaaatttttgttcc
atgaatggtatgactcaggatcaaaatactcctcagaagtatgagacaaatggtaacagc
agccctggaagtgatgtcagtaccgacagcaagttaactcctccagaatcccagtcacca
ctgcactggttagcagatctcgcagagcaaaaagccagagaggaaaaaaaagaaaacaaa
gaatgtgcacttgaaaaatccatgaaagaagaacaggaacaaaaccccagttctccaaac
tgcagagcatctccttcagtgtcccagagtaatgaacaaggctcaaccttacgggatttg
ctgacaacaacagctggcaagctacgagtgggctctacagatgctggtattgcatttgca
ccagtgtattcaatggggaccccaagtagcaaaagtggaaggagtatgccaaatattctt
gatgacataattgcttcagttgttgaaaacaaaattccaccaaataaagcctctaagata
aatgtaaaatcagaacttaaagaagaacctaaagaaagcaaaaaatgtgccatgaatgaa
aataaagtgtacagtgatataccacattcttggatctgcgaaaagcatattttatggctt
aaggattataagaacggtaataactggaagcttttcaaagaatgctggcgacaaggacaa
cctgcgttggtttctggtgttcacaagaaaatgaacacgagcttgtggaaggcagagtca
attggtcttgattttggagaccagcaagccgatctgctgaactgcaaagatagcattact
tcaaatggcaatgttaaggaattctgggatggttttgaagaagtttcaaaacggcaaaaa
acccaaagtggggaaacagttgttttaaaattgaaagattgcccttcaggagaagatttc
aagacgatgatgccagcaagatatgaagatcttttaaagagcctgccattgccagaatat
tgtagtccagaaggaaaattcaatctagcctctcatttgccaggattttttgtacgacct
gatctagggcccaggttgtgcagtgcatatggtgtagctgctgcaaaagatcatgatata
gggacaacaaatcttcatattgaagtttctgatgttgtaaatattctagttcacgttggc
atagcaaaaggaaatggtgttctctcaaaagcaggaatactcaagaaatttgaagaagaa
gatttggatgatattctaagaaaaagattgaaggactcaagtgaaatacctggtgctctg
tggcatatatatgctgggaaagatgttgacaagataagagaatttcttcaaaagatttca
aaagaacaaggccttgaggttctaccagaacatgatccgatacgtgaccaaagctggtat
gtgaacaaaaagctccgccagagactgcttgaagaacatggagtgagaaccttcactctt
atccagttccttggtgatgcgattgtcttgccagcaggagcacttcatcaggtacagaat
tttcacagctgtattcagataacggaggattttgtgtctccagagcatcttgtacattca
tttcacttaacacaggaactgagacttttaaaggaagaaatcaattatgatgataaatta
caggtaaaaaatattttgtatcacgcagtcaaagaaatggtgagagctttgaagatacat
gaaagtgaaatagaggatatggaagaaaactaa
DBGET
integrated database retrieval system
