Echinops telfairi (small Madagascar hedgehog): 101653489
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Entry
101653489 CDS
T08707
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101653489 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etf03000
]
101653489 (CIC)
Transcription factors [BR:
etf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101653489 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
101653489
NCBI-ProteinID:
XP_045148660
LinkDB
All DBs
Position
Unknown
AA seq
2520 aa
AA seq
DB search
MKPMKKACAGIPGPGSSGSKSPPATRAKALRRRGAGDCDKPEDEEEVVVASTKQPGPEEA
VEEGEEAVVAAAVVVTQRGPGAEGPSAELHPDDPVLGPAEDPKGEGDAGRWEPSLSRKTA
TFKSRAPKKKYVEEHGTGAPEEQERTPEDASALGLPPLPPTSTRSSSTDTASEHSADLED
EPAEACGPGPWPPGTPGGSYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGD
RALTFYEGGAGGGVDVVLDATPPPGALAVGMPVCTCVEPGVAAYREGVVVEVATKPAAYK
VRLGPGPGAQPGPQPPHCEPEETVWVARSSLRLLRPPWEPEALLRKPPAASEEEPAEPRA
TLPPCPAPLDPKQPEDAEVSKISFGGSLGTCEEGEGKHPPALGATPILLPLPPPQLLSPP
PKSPAFAGPGRPGEQLSPCQEGSQGGSRSSSVASLEKGTAPAARARTPLTAAQQKYKKGD
VVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADGGPGGAGR
TGGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAVMLVS
LGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRSRHLSA
STPKAGMLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLPHSGVL
GAPGAGPGSTAPDFSKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPSPLLLL
PPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEAGLASEARVGGPGRGCRE
TETPAPAGAASGKPSLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAFHPSPA
ALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQ
PSEAQQPASHLVASNQSKEPAESAAVAHEQPPSGTGNADPGRPPAATCPESPGPGPPHTL
GGVDPGKGPPPATEEEAPGPPGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSL
SALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKIL
GEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLPGGHKE
PRERSMSETGTAAAPGVSTELLSVTAQTLLSSDTKTPGSSSCGAERLHPVGPGSARPRAF
SHSGVHSLDGGEADSQALQELTQMVSGPVSYSGTKPAAQYGAPGPFTAPGEGGALAASGR
PPLLPPRASRSQRATSEDMTSDEERMVICEEEGDDDVIAEDGFSTTDIDLKCKERVTDSE
SGDSSGEDPEGCKNFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPSAAFGKGYGPTPSSS
SPAAVTSTSAAPSFSLGSGTFKTQESGPASTTGPLRPPALGPGGPVTPSKATRFLPADPA
TFRRKRPESVGALEPPVPSVISVPPGSGAGNLLQTLVLPPSKEDREGSRARMPSAPAPSL
AYGAPTASLSRPAATTVTNVVRPVSSTPVPIASKPFPTVGRAEVAPSDTAGARTEPGTGS
RAPGGSPIGVSLVYSDRKSTAATSPAPHLVAGPLLGTVGKAPATVTNLLVGSPGYGAPAP
PAVQFIAQGAPGSGPSSGSGAGAASGPNGPVPLGILQPGTLGKAGGITQVQYILPTLPQQ
LQVAPAPATAAGAKAAAPSAPAPTTSIRFTLPPGASTNGKVLAATAPTPGGIPILQSVPS
ALPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPGMSVRGGGAAQPLPLVSPPFSVPVQ
NGAQPTSKIIQLTPVPVSTPSGLVPPLSPAALPAPTSQPQKVLLPSSTRITYVQSAGGHA
LPLGTSPASSQAGAVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQTPLLAPGQVGVSPV
PSPQLPPACAAPGGPVITAFYPGSPAPTSSTPLAQPSQAPPSLVYTVATSTTPPAAAILP
KGPPAPATATPAPTSPFPSATGSMTYSLVAPKAQRPAPKAPQKVKAAIASIPVGSFEAGA
PGRPGPVSRQPLDPGPAHEPMAPEAELEGQPTTPAPPPSLETWAPTARSSPPPLPLPPAE
ERAGTKPPESLAPLQGGKFPSSSSDWRVPGLGLESRGEPPAPPSPAPAPAPSGSSEGSSG
RPAGETPERKEAPSAGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLP
SPTLQSLATSPRAILGSYRKKRKSSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKC
EGDIFTFDRPGTEGEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAA
FQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEGPLPGPPPTGTAAAPAPVPS
PAAGGPDPASPGSDSGQSPAAPPLPLPLESGPGQPGWEGVPQSSPPPPLPSGSSTAATGR
NT seq
7563 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccatgaagaaagcgtgtgccgggatccctggccctggcagcagtggcagcaag
tcccccccagccaccagggccaaggccctgcgacggcgaggggctggggactgtgacaag
cccgaggacgaggaggaggtggtggtggcctccacgaagcagccaggcccagaagaggct
gttgaggagggcgaggaggcggtggtggcggcggcagtggtggtgacccaacggggccct
ggggcagaggggccgtctgcagagctgcaccctgatgacccagtcctgggcccagccgaa
gaccccaagggggagggagatgcaggccgctgggagccctcactgagccgtaagacggct
acgttcaagtcgagagcgcccaagaagaagtacgtggaggagcatgggactggggcccct
gaggagcaggagcggacgcctgaggatgccagcgccctgggcctgcctcccctgccgccc
acctccacccgctcctcatccaccgacaccgccagcgagcattcggccgacctggaggat
gagcccgccgaggcctgcggaccggggccctggcctcctggcacccccggaggcagctat
gacctgcggcagctgcggtcccagcgggtcctggcgcgccgcggcgatggcctcttcctg
ccggcggtggtgcggcaggtgcgccgaagccaggacctgggcgtgcagttccctggcgac
cgggccctgactttttacgaggggggcgcaggtggcggtgtggatgtggttctcgacgcc
acgccgccccctggtgcgctggcagtgggcatgcccgtgtgcacctgcgtggagcccggc
gtggcagcctaccgtgagggggtcgtggtggaggtggccaccaagcctgctgcctacaag
gtccgcctcggccctggccctggtgctcagcctggccctcagccgccccactgcgagccg
gaggagaccgtatgggtggcccgctccagcctgcgcctgctgcggcccccgtgggaaccc
gaggccctgctgagaaagccccccgcagcctccgaggaggaaccggctgagcccagggcc
acgctgccgccctgccctgctccactggaccccaagcagcccgaggatgcggaggtctcc
aagatcagctttgggggcagcctggggacctgtgaggagggtgaagggaagcacccgcca
gccctgggcgcgacgcccattctgctccccctgcctccgccccagctcctctcgccgccc
cccaagtctccagcctttgcaggccccggccgccctggggagcagctctcgccctgccag
gagggcagccagggcggcagtcggagcagcagcgtggcctccctggagaaggggaccgcg
ccggccgcccgggctcgcacgccgctgaccgcggcccagcagaagtacaagaagggcgac
gtggtctgcacgcccaacgggatccgcaagaagttcaacggcaagcagtggcgccggctg
tgctcgcgggacggctgcatgaaggagtcgcagcgccgcggctactgctcgcgccacctg
tccatgcggaccaaggagatggaggggctggcggacggcgggcccggcggggccgggcgg
acgggcggcgtggcggcccgggagggcagcaccgagttcgactggggcgacgagacgtct
cgggacagcgaggccagcagcgtggccgcccggggagactcgcgcccacgcttggtggcg
ccggcggacctgtcccgcttcgagttcgacgagtgcgaggcggccgtcatgctggtgtcc
ctgggcagctcgcgctcgggcacgccctccttctccccggtctccacgcagtcgcccttc
tcccccgccccctcgccctcgccctcgcccctcttcggcttccggcccgccaacttcagc
cccatcaacgcctccccggtcatccagcgcaccgccgtccgcagccgccacctgagcgcc
agcaccccgaaggccggcatgctgaccccgccggacctgggcccccacccgccgccgccc
gccccccgggagcgccactcctccggcatcctgcccaccttccagaccaacctgaccttt
actgtgcccatcagccccgggcggcggaagacggagctgctgccgcactcgggggtcctg
ggggcgcccggcgctgggcccgggagcaccgctccggacttctccaagagcgacagcctg
gactcgggcgtggactcggtgtcccacacccccacgccctccacgccggccggcttccgc
gccgtgtcgcccgccgtgcccttctcccgatcccgccagccctccccgttgctgctgctg
cccccgcccgccggcctgacctcggacccggggccctccgtgcgcagggtgcccgccgtg
cagcgggactcgcccgtcatcgtccgcaaccccgacgtcccgcttccctccaagttccca
ggagaggcaggcctggccagtgaggcccgggtagggggccccgggcggggctgccgtgag
acggagactccagcccctgccggggcggccagtggcaagcccagcctgcccccgcccctg
ccggcccccgtacccatcactgtgcctccagccgcgccgactgccgtggcccagccgatg
cccacctttggcctggcttcttcgcccttccagcctgtggccttccacccctcacccgcc
gccctgctgcccgtcctcgtgcccagcagctacaccagccatcctgcccccaagaaggag
gtcatcatgggccggcccgggacagtgtggacgaatgtggaacctcgctccgtggccgtc
ttcccctggcactccttagtccccttcctggctcccagccagcctgacccctctgtgcag
cccagtgaggcccagcaacctgccagccacctggtggcctccaaccagagcaaagaacct
gctgagtcagcagctgttgctcacgagcagccacccagcgggacaggaaatgccgatcct
gggcggccccctgcagccacctgcccggaaagcccagggcctggacccccacacactttg
ggtggggtagatcctggcaagggaccccctcctgctactgaagaagaggcccctggtccc
ccaggagagtcccggttggacagtgagacggagagcgaccatgacgatgccttcctctcc
atcatgtctcccgagatccagctgcctctgccacctggaaaacgccggacccagtcgctc
agtgccctgcccaaagaacgggactcgtcttcggagaaggacggacggagccccaataag
cgtgagaaggaccacattcggcgacccatgaacgccttcatgatcttcagcaagcggcac
cgggccctggtccaccagcgccaccccaaccaggacaaccggactgtcagcaagatcctg
ggcgagtggtggtatgccttggggcccaaggagaagcaaaagtaccatgacctggccttc
caggtgaaggaggcccacttcaaggcccatccagactggaagtggtgcaacaaggaccgg
aagaagtccagctcggaggccaagcccaccagcctgggtctgccggggggtcacaaggag
ccccgggagcggagcatgtcagagacgggcaccgcagccgcccctggagtgtcgacagag
ctgctgtctgtgactgcccagaccctcctgagctcggacaccaagaccccagggagcagc
tcctgtggggcagaacggctgcaccccgtggggcctggctctgcccggccccgtgccttc
tcccacagcggtgtccatagcctggacggcggggaggcagacagccaggcactgcaggag
ctgactcagatggtgtctggccccgtgtcttactctggcacaaagcccgctgcccagtat
ggggcaccgggacccttcacggctcctggtgagggaggtgccctggcagccagtggacgg
ccccccctgctgcctccccgagcttctcgttcccagagggccacgagcgaggacatgacc
agtgatgaggaacgcatggtcatctgtgaggaggagggtgacgatgatgtcattgcggaa
gacggcttcagtaccacggacattgatctcaagtgcaaggagcgggtgactgacagcgag
agtggggacagctctggggaggaccctgagggctgcaagaactttggccggaaggtcttc
tcgcccgtgatccgttcctccttcacacactgccgtccacctctggaccctgagccccct
ggacccccagacccctctgctgcttttggcaagggctatggccccaccccgtcttcgtct
tcgcctgccgcggtcacctccacctcggcagccccctccttctctctgggctcaggaacc
ttcaagacacaggagtctgggccggccagcacaacaggccctctccggcccccggccctg
gggcctgggggccctgtgaccccctccaaggccacccggttcctcccagcagaccctgcc
accttccgacgcaagagacctgaaagtgtgggggccctggagcccccagtcccctcggtc
atttctgtgccccctggcagtggagcaggaaacctcctgcagacactggtcttgcccccg
agcaaggaagaccgggagggcagcagggcacgaatgccctctgccccggccccgtcgctg
gcctatggggctcccacagcctccctgtctcgcccggctgccaccacggtcactaatgtg
gtgcggccggtcagcagcactcccgtgcccattgcctctaagcccttccccaccgttggc
cgggctgaggtggcaccaagtgacacagcaggtgccaggactgagccgggcactgggtcc
cgagctcctgggggctccccgattggtgtcagcttggtgtactcggacaggaagtccaca
gcagccacctcaccagccccacacttggtggctgggcccttgctgggcactgtgggaaag
gcacctgccaccgtcaccaacctgctggtgggcagcccaggctacggggctccggcgccc
cctgctgtccagttcattgcccaaggggcccctggcagcggaccctcctcaggctcagga
gcaggtgctgcgagtggccccaatgggccggtgcccctgggcatcctgcagccgggcacc
ctgggcaaggctgggggaatcacgcaggtgcagtacatcctgcccacactgccccagcag
ctccaggtggcacctgcacctgcaaccgctgctggggccaaggcggcagctcccagtgcc
cccgcacctaccaccagcatccgcttcaccctcccgccgggcgcctctaccaacggcaag
gtcctggctgccactgcacccacgcccggtggcatccccatcctgcagtccgtcccttcc
gccctgccccctaaagcccagtccgtgtcgccagtgcaggccccgcctcccggtggctcc
gcccagctgctgccaggaaaggtcctggtaccactggcagccccaggcatgtctgtgcgg
ggtggaggggccgcccagccattgcctctggtgagcccacccttctcagtacctgtgcag
aacggagcccagcccaccagcaagatcatccagctgacgcctgtgcccgtgagcaccccc
agcggcctggtgccgcctttgagcccggctgcgctcccagcccccacctcccagccccag
aaggtcctactgccctcttccaccaggatcacctacgtgcagtcagctggggggcacgcg
ctgcccctgggcaccagccctgcatcgagccaggctggggcagtgacctcctatgggccc
acgagctctgtggccctgggttttacctctctgggacccagtggtcctgccttcgtgcag
cccctgctctcaggccagactccgctgttggctcctggccaggtgggcgtgtcgcctgtg
cccagccctcagctgcctcctgcctgtgcagcccccggaggccccgtcatcacggccttc
taccctggcagccctgcacccacctcctcaacgcccttggcccagccatcccaggccccc
cctagcttggtctacactgtggccaccagcaccacgccccctgccgccgccatcctgccc
aagggcccgcctgcccccgcaactgccaccccagcccccaccagcccctttcctagtgcc
acaggttctatgacctacagtttggtggctcccaaggcccagcggccagcccccaaggcc
cctcagaaagtgaaggcggccatcgccagcattcccgtgggctcctttgaggcaggggcc
cctgggcggcctggccctgtgtcccggcagcccctggatcctgggccagcccacgaacca
atggcccccgaggctgagctggaggggcaaccgacaacacctgccccaccaccctccctg
gagacctgggcacccacagcccggagcagccccccaccgctcccactcccacctgccgag
gagcgggctggcaccaagccccccgagagcctggccccactccagggcggcaaattcccc
agctcatcttcagattggcgtgtcccagggctgggcctggagagccgcggggagccccct
gcccctcccagccctgccccagctccagcccccagcggcagcagtgagggcagcagtggg
cggccggccggggagaccccggagcgcaaggaggcaccgagtgccggcaagaaggtgaag
gtgcggcccccgcccctgaagaagacctttgactcagtggacaacagggtcctgtcagag
gtggactttgaagagcgctttgctgagctgcccgagttccggcccgaggaggtgctgccc
tctcccaccctgcagtctctggcgacctccccccgcgccatcctgggctcctaccgcaag
aagaggaagagctccacggacctggattcggcgccggaggaccccacctcgcccaagcgc
aagatgaggaggcgctccagctgcagctcagagcccaacacccccaagagcgccaagtgc
gagggagacatcttcacctttgaccggccaggcacggaaggtgaggacgtgctgggcgag
ttggagtacgagaaggtgccctactcgtccctgcgccgcaccctggaccagcgccgcgcc
ctggtcatgcagctcttccaggaccacggcttcttcccctcagcccaggccacagctgcc
ttccaggcgcgctacgcggacatcttcccgtccaaggtgtgcctgcagctgaagatccga
gaggtgcgccagaaaatcatgcaggccgccacacccaccgagcagcccccaggggccgag
ggccccctgcccgggccgcccccaactggcaccgctgctgcccctgctccagtgcccagc
cctgcagctgggggccctgaccccgcctcccctggctcagactctggccagagcccggcc
gccccaccactgcctctaccccttgagtcagggcccggacagcctggctgggagggggtc
ccccagtcctccccaccgccgccgctgccctctggctcctccacagccgccacgggcagg
tga
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integrated database retrieval system
