Echinops telfairi (small Madagascar hedgehog): 101653755
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Entry
101653755 CDS
T08707
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etf03016
]
101653755 (TRUB1)
Enzymes [BR:
etf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
101653755 (TRUB1)
Transfer RNA biogenesis [BR:
etf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101653755 (TRUB1)
Prokaryotic type
101653755 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
101653755
NCBI-ProteinID:
XP_045147463
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MAATEAAMASSSLSLEKDPAPVLESSGTAAATAATKPATVAAAATAAAAPATEAAAGSDA
GDAKSDMANKLLSLNGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPLPKCNKRKKQTFKI
GHGGTLDSAAKGVLVVGVGRGTKMLTNMLSGTKRYIAIGELGKATDTLDSTGKVTEEKPY
DKITQEDIEGILEKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEAVEAKPARPVTVYSIS
LQRFQPPLFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLDDHALPEEK
WTIDDIARALELCAALLPAETGLKKPKPDESKEQPLSCESISLSEVKAEGDAIQAS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaccgaggctgcgatggcgtcgtcgtctttgtctttggaaaaagacccagct
ccagtccttgaaagttcaggcacggctgcagcaacagctgccaccaagcctgcgacggtg
gctgcagccgcgacggctgcggcagcgcctgcgactgaagccgctgcgggatcggacgcc
ggtgacgccaagtctgatatggctaataagctgctgtccctgaatggcgtgttcgccgtg
cacaagcccaaagggcccacttcagccgagctgctgaatcggctaaaggaaaagctgctg
gcagaagctggaatgccgcttccaaaatgcaacaagaggaaaaagcagacattcaaaatt
ggacacggaggaaccctagacagtgcagccaaaggagttttggtggttggagttggaagg
ggcacaaaaatgttgaccaatatgctatcagggaccaagaggtatatagccatcggagaa
cttgggaaggccactgatactctggactctaccgggaaagtcacagaagaaaagccttat
gataaaataacccaagaagatattgaaggcattcttgagaaatttactgggaatataatg
caagtaccccctctgtattctgccctcaagaaagatggacagagactgtcaactctgatg
aagagaggggaagcagtggaagccaaacctgccagaccagtcactgtctacagcatctcc
ctccagaggttccagccgccgcttttcacactcgatgttgaatgtggcggaggtttttat
atcagaagcttggtcagtgacattggcaaagaactctcctcctgtgccaacgtgctcgag
ctgacccgaaccaaacagggaccgttcacgctggatgaccacgcgcttcccgaggagaag
tggaccatcgacgacattgcacgggctctggagctctgtgcagctcttctccctgcagaa
acgggacttaaaaaacccaaaccagacgagtccaaagaacagcctctgagctgtgaatct
atatcattaagtgaggttaaggcagaaggtgatgcaattcaggcaagttaa
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