Echinops telfairi (small Madagascar hedgehog): 101654025
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Entry
101654025 CDS
T08707
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101654025 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
101654025 (VPS8)
Membrane trafficking [BR:
etf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101654025 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
zf-RING_Vps41
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
WD40_CDC20-Fz
zf-RING_11
zf-C3H2C3
zf-RING_5
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR3_1st
GED
PHD
zf-C3HC4
EIF3I
Motif
Other DBs
NCBI-GeneID:
101654025
NCBI-ProteinID:
XP_045152357
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MENEPDTETMEQSLGAKTTEEELSKSFSLEASLSKLSYTDLDKELEFTNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDNFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINSDCSRLLCGFAKGQITMWDLAGGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPTLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNSVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAVAADRMVAILFHYADRALRRCPEQGKIQVMEQHFQDTVPTIVDYCLLLQRKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIIHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEHVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPVVKNQVFEFLIRLHSAEASPEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLHAGGTVQFEESRLIRMA
EKAEFYQICEFMYERDHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKHSVWQK
AMDHIEELVSLRPCKAAELVATHFSGQIEAVIKKLQNQLLLFKFLRSLLDPREGAPVHPE
PLQIPPGVTEQFIDLLCQFSPHQVIETLEVLECYRLEETIQITQKHQVHEVTAYLLEKKG
DVHGAFLLLLERLRSKLQEITHEEENTRGTPPLKDVEGALVETIALCQRNSHNLNEQQRE
ALWFPLLEAVMAPQKLSSSVAPHPHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
RGKLGEIQGLILGMLETFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSV
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIEVEGQTRWTCYKCSSSNKVGKLSE
NSSELKKGRITASQVKMSPSYQPSKGEPVAKVPSEPVLDPQQIQAFDQLCRLYRGGSRLA
LLTELSQNRSSEAYRPFSGTHSSPAFHSIFHNENFQLHLIPPPATED
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgagccagacactgaaactatggaacagagccttggtgccaagactactgaa
gaagagctgagtaagtcattcagcctagaagcttcgctttcaaaactctcctacacggat
ttggacaaggaattggagttcaccaatgatctgatcgatgacaaggagtttgatattcct
caagttgatactcccccaacactggaaagcatattgaatgagactgatgatgaagatgag
tcttttgtgctggaagatcctacattgttaaacatcgacactattgattctcactcctac
gatacctcctctgtggcaagctcagacagtggcgataggaccaacctaaagaggaagaag
aaattacctgataatttttctctccatggatcagtgatgcggcattcacttctgaaggga
atttctgcccagatcgtgtctgcagctgacaaagtagatgctggcttgcctacagcaatt
gcagtgtccagtctgatagcagtcggtacctcccatggattggctttaatatttggaaaa
gatcagaaccaggctttgcgactctgtctggggagcaccagtgttgggggtcagtacggg
gccatctccgccctcagtatcaacagtgactgctcacggctgctgtgtggctttgccaaa
gggcagatcaccatgtgggatttggctggtggaaaacttctcagatcaataacagatgct
caccctccaggaacagccatcctgcacatcaagtttacagatgacccaactctcgcaatt
tgcaacgacagcggaggctctgtgtttgaactgacctttaagagagtgatgggagtgaga
acatgtgaatctagatgcctgttcagtggctccaagggagaagtttgctgtatcgaacca
ctgcattccaagcccgagttgaaagaccatcccatcacacagttttcgttactggccatg
gcgtctctgacaaagatcctggtcattggcttgaaaccaaccttgaaggtgtggatgact
tttccctatggacggatggacccttcgagcgttcccttgctggcctggcacttcgtggca
gtccacaactctgtgaaccccatgcttgccttctgcagaggcgatgtggttcacttcctg
ctggtaaagcgggatgaatcaggagcgatacatgttactaagcaaaagcatcttcacctg
tactatgaccttatcaacttcacctggataaactcacgcacagtggtgctcttggacagt
gtagagaagttgcatgtgattgatcgccaaactcaagaggagctggaaacggtggaaatc
tccgaagttcagttggtctacaacagcagccacttcaagtcattagccactggaggaaat
gttagccaggcgctggctttggttggagagaaggcttgttaccaatccatcagtagctat
ggtggtcagatcttttatttgggaacaaaatctgtgtatgtgatgatgctgaggagctgg
cgggagagagtggatcacctgctgaaacaggactgtctcacggaagccttggctctggcc
tggtcttttcatgaaggaaaggcaaaagcagtcgtgggattgtcaggagatgccagtaag
cgaaaggctgtggctgcagatcggatggtcgccatcctcttccactacgcagaccgggcc
ctgaggaggtgccccgagcagggcaaaatccaagtcatggagcagcattttcaggacacg
gtgcccaccatcgtggactactgcctcctgctgcagcgaaaggatcttttatttagccag
atgtatgacaaattaagtgagaattcggtggccaaaggagtgtttttggagtgcctcgag
ccctatattttaagtgataaattggtggggatcaccccccaggtcatgaaagacttgatc
attcatttccaagataagaagctaatggaaaatgtggaagccctaattgtacatatggac
atcaccagcctagatattcaacaggtagttctcatgtgctgggagaaccgtctctatgat
gctatgatctatgtctacaacagaggcatgaatgagtttattagtccaatggagaaactt
ttcagagtcattgcacctcctctgaacgcaggaaagactctaacagatgagcacgttgtt
atgggcaacaagcttctcgtgtatattagctgttgcctcgcagggcgtgcctaccccctt
ggtgacatccctgaagatcttgttcccgtggtcaaaaaccaggtgtttgaatttctaatt
cgcctgcattcagcagaagcttccccagaggaagagatatatccctatgttcggacttta
ttacattttgacacaagagaatttttaaatgttttggcattgacttttgaagattttaaa
aatgacaagcaagctgtggaatatcaacaacgaattgtggatattttgttgaaagttatg
gtggagaattcagacttcactccctcacaagtagggtgtctttttacattccttgctcgt
cagcttgcgaaacctgacaacacactttttgtaaacagaaccctttttgatcaggtcctt
gaattcctctgcagtcctgatgatgactcccggcactctgaaagacagcaggtgctttta
gaactgctgcacgctggaggcacagttcagtttgaagagagtcgactgatccgcatggca
gaaaaagcggagttctaccaaatttgtgagtttatgtatgagcgagaccaccagtatgac
aagattattgattgctacttacgtgaccctctgagggaggaagaagtctttaattatatt
cacaatatcctatccattcctggacacagtgcagaggaaaagcattctgtgtggcagaaa
gcaatggatcatattgaggaactcgtgtccctgaggccctgcaaagctgcagagctggtc
gccacccacttttccggacagattgaagcagtcattaaaaaactgcagaaccagcttttg
cttttcaagtttttgaggagccttctcgacccaagggaaggggctcccgtgcacccagaa
ccgctgcagataccccccggtgtcaccgagcagttcatcgatctgttgtgccagttcagc
ccacaccaggtgatagagacgctggaagtcctggagtgctaccgcctggaagaaacgatt
cagataacccagaagcatcaagttcatgaggtcacggcttatctactggagaagaaagga
gatgtacatggtgccttcttactactgctggagaggctacgaagtaaacttcaagaaatt
acacatgaggaggaaaatacgagagggacacccccactgaaggatgtggaaggggccttg
gtagagaccattgctctttgccagagaaactcgcataatctgaacgagcagcaacgagag
gccctctggttcccattgttggaggcagtgatggccccgcagaagctctccagctcagtt
gcacctcatccacactctgaagccctgaagtctttaaccatgcaggttctaaacagtatg
gcagcattcattgcccttccatccatcttgcaaagaatcttacaggatccagtttatgga
agaggaaaacttggagaaatccagggacttatactgggaatgctggaaacctttaactat
gaacaaaccttgctggaaacaactactagccttctcaaccaagatctccattggtcactc
tgtaatctgagagcttccgtcacaagaggactgaatcccaagcaggattattgctccgta
tgtttgcagcagtacaagagacgccaagaaatggctgatgaaattattgtctttagctgt
ggccatttgtatcactcattttgtctgcaaaacaaagagtgtaccattgaagtcgagggc
caaacaagatggacatgctacaaatgcagctcaagcaacaaagtaggaaaactaagtgaa
aattcatctgaactgaagaagggacggataaccgcctcacaggtaaaaatgtctccatcc
taccagccatccaaaggggaacctgtcgccaaggtaccctcagaaccagttctggatcca
cagcaaattcaagcatttgatcagctttgccgcctctaccgaggaggctccaggctggcc
ctcctgaccgagctctcccagaaccgcagcagtgaggcctacaggcccttcagcggcacc
cacagcagccctgctttccacagcatcttccacaacgagaacttccagctgcacctcatc
ccccctccggccaccgaggactga
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integrated database retrieval system
