Echinops telfairi (small Madagascar hedgehog): 101654123
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Entry
101654123 CDS
T08707
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04151
PI3K-Akt signaling pathway
etf04510
Focal adhesion
etf04512
ECM-receptor interaction
etf04518
Integrin signaling
etf04974
Protein digestion and absorption
etf05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101654123 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101654123 (COL2A1)
04518 Integrin signaling
101654123 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101654123 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101654123 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101654123 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
etf00536
]
101654123 (COL2A1)
Glycosaminoglycan binding proteins [BR:
etf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101654123 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
101654123
NCBI-ProteinID:
XP_004711487
UniProt:
A0ABM0IZI5
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLIAAVLRCQGQDAQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDVKDCLRPEIPFGECCPICPTDLATASGHPGPKGQKGEPGDIKDVVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGSPGPQGFQGNPGEPGEPGVSGPMG
PRGPSGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGAKGENGASGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAG
PKGPNGENGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKGGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKAGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGSRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGQAGPPGPAGFAGPPG
ADGQPGIKGEQGEAGQKGDAGSPGAQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDTGLQGPAGAPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSSGDRGPPG
PVGPPGLSGPSGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPSG
PTGKQGDRGEAGAQGPMGPAGPAGARGIAGPQGPRGDKGETGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPMQYMRADQAAGSLRQHDVEVDATLK
SLNNQIENIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKGKEKKHVWFGETINGGFHFSYGDDNLAPNTASIQMTFLRL
LSTEGAQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYSALKDGCTK
HTGKWGKTIIEYRTQKTSRLPIIDIAPMDIGGPDQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccaaacgctggtgctgctgacgctgctcatcgccgctgtc
cttcgctgtcagggccaggacgcacaggaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacacgggg
actgtcctctgcgacgacataatctgtgaagatgtgaaagactgcctcaggcccgagatc
cccttcggagagtgctgccccatctgcccaactgacctcgccactgccagtgggcaccca
ggaccaaagggacagaaaggagaacctggcgacatcaaggatgttgtaggacccaaagga
cctcctgggccccagggacctgcaggtgaacaaggcccccgaggtgatcgtggcgacaaa
ggcgaaaaaggtgcccctggacctcgtggcagagatggagagcctgggacccctggaaac
cctggtccgcccggtcctcctggcccccctggtccccctggtcttggtggaaactttgct
gcccagatggctggaggcttcgatgagaaggctggaggagcccagatgggagttatgcaa
gggccaatgggtcccatgggaccaagaggacctccaggccctgccgggtcaccgggacct
caagggtttcaaggcaatcctggtgaacctggcgaacccggagtttctggccccatgggt
ccccgtggtccttctggcccccctggaaaacctggtgatgatggtgaagctggaaaacca
gggaaatctggtgaaagaggccctcctggccctcagggtgctcgtggtttcccaggaacc
ccaggtcttccaggtgtcaaaggtcacaggggttacccaggtctagacggtgccaagggg
gaagcaggtgctcccggtgctaagggtgagaacggcgcctctggtgagaatggatctccg
ggtcccatgggtccccggggtctgcctggcgagcgaggacggactggtcctgccggtgct
gcgggtgcccgaggcaatgacggccaaccaggccctgcaggccctccgggtcccgtgggt
cctgctggtggccctggctttcccggtgctcctggtgctaagggtgaagctggccctact
ggtgctcgtggccctgaaggcgctcagggtccccgcggtgaatctggtactcctggctcc
cccgggcctgccggtgcctctggtaaccctggaactgacggaattcctggcgctaaagga
tcggctggtgcccctgggattgctggtgctcctggcttccctgggccccgtggtcctcct
ggccctcaaggtgccaccggtcctctaggcccaaaaggccagacgggagagcctggtatc
gcgggcttcaaaggtgaacaaggccccaaaggagagaccggtcctgccggcccccaggga
gccccaggcccagctggtgaagaaggcaagagaggtgcccgtggagagcctggtggtgct
gggcccattggtccccccggagaacgaggtgcccctggcaaccgtggtttcccaggtcaa
gatggtctagcaggtcccaaaggggcccctggagagcgagggcccgctggcctggcaggt
cccaagggacccaacggggaaaatggtcgacccggagaacctggccttcctggagcccgg
ggcctcactggtcgccctggtgatgccggtcctcaaggcaaagttggcccctcgggtgcc
cctggtgaagacggtcgtcctggtcctcccggtcctcagggggctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaatggtgagcctggcaaaggtggtgagaag
ggactgcctggagcacccggtctgagaggtcttcctggtaaagacggtgaaacaggtgct
gcaggcccccccggccccgctggacctgctggagaacggggcgagcagggggctcctgga
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaaagca
ggtgaccagggtgttcccggtgaagctggtgcgcctggccttgtgggccccagaggtgag
cggggcttcccaggagaacgaggctctccaggggcccagggcctccagggctcccgtggc
ctccctggcactcctggcacagacggtcccaaaggtgcttctggaccagctggacccccc
ggggcccagggccctccaggtctgcagggaatgcctggcgagagaggagcagctggtatc
tctgggcctaagggagacaggggtgatgttggtgagaaaggtcccgagggagcccctggg
aaagacggtggccgaggccttacaggtcctattggcccccctggccctgctggtgccaat
ggtgagaagggggaagttggacctcctggcccggcggggacggctggagctcgaggtgcc
ccgggtgaacgtggacaggctggcccccccgggcccgctggatttgcagggcctcctggt
gctgatggtcagcctggtatcaagggcgagcaaggagaggccggccagaaaggtgacgct
ggttccccaggtgctcagggcccctcaggagctcccgggcctcagggtcctaccggagtg
actggccccaaaggagcccgaggtgcacaaggccctccgggagccactggattccccgga
gctgctggccgcgtcggacccccaggctccaatggtaaccccggcccccctgggccccct
ggcccctctggcaaagatggccccaaaggagcacgaggagacagcggcccccctggccgt
gctggtgacactggcctccaaggtcctgctggagcccctggcgaaaaaggggagcctgga
gatgatgggccttccggtcctgacggccctccaggcccccaaggtcttgctgggcagagg
ggcatcgtgggtctgcctggacagcgtggtgagagaggattccccggcctgcccggcccg
tcgggtgagcctggtaagcagggagctcccggctcctctggtgaccgaggtccccctggc
ccggtgggccctcccggcctgagtggtccttctggtgagcctggacgcgagggaagccct
ggtgctgacggcccccctggcagagacggagcagccggtgtgaagggtgaccgtggtgag
actggtcccctcggtgctccaggagctcctggaccccctggctctcctggcccctccggc
ccaactggcaagcagggagaccgaggagaagctggtgcacaaggccccatgggacctgct
gggccagcaggagcccgaggaatagccggcccacaaggcccccgaggggacaaaggagaa
actggagaggctggcgagaggggactgaaggggcatcgtggcttcactggtctgcagggg
ctgcccggccctcctggtccttctggagaccaaggtgcttccggtcctgctggtccttct
ggccctagaggtccccccggccctgttggcccctctggcaaagatggctctaatggaatc
cctggccccatcggacccccaggcccccgtggacgttcgggagaaactggccctgctggt
cctcctggcaatcctggcccccccggccctccaggtccccccggccccggcatcgacatg
tccgcctttgctggcctcggccagagagagaagggccctgacccgatgcagtacatgcgg
gctgaccaggcagctggatcgctgaggcagcacgacgtcgaggtggatgccacgctcaag
tccctcaacaaccagatcgagaacatccgcagccccgagggctctcgcaagaaccccgcg
cgcacctgccgtgacctgaaactctgccaccctgagtggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggtcttctgcaacatggagaccggc
gagacctgcgtctaccccaacccggccaacgtccccaagaagaactggtggagcagcaag
ggcaaggagaagaagcacgtttggtttggggaaaccatcaatggcggcttccacttcagc
tatggagatgacaacctggcccccaacactgccagcatccagatgaccttcctgcgcctg
ctctccacggagggcgcccagaacatcacctaccactgcaagaacagcatcgcctacctg
gacgaagccgccggcaacctcaagaaggccttacttatccagggctcaaacgacgtggag
attcgggctgagggtaacagcaggttcacgtacagtgccctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagaccatcatcgagtaccggacccagaagacctctcgcctc
cccatcattgacatcgcacccatggacataggggggccggatcaggaatttggtgtggac
atcgggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
