Echinops telfairi (small Madagascar hedgehog): 101654409
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Entry
101654409 CDS
T08707
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etf03036
]
101654409 (CHD5)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101654409 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHDCT2
CHDII_SANT-like
SNF2-rel_dom
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
101654409
NCBI-ProteinID:
XP_030743896
UniProt:
A0ABM1VMK9
LinkDB
All DBs
Position
Unknown
AA seq
2007 aa
AA seq
DB search
MQVAWESSLHRRALETPTSDLGPAPGQEGAGVAARCKRRRPRLLLCPHSLGSQMPAQPPG
LGGAREPRRLLLQERLVLTLQPAALDYSSRSRPAAARLGAPGRAGWGRAGRVQAELEDPS
SALAGPLWSPVRSTLPRLPAGHPLAHPRARVCPLPQAAQSPSLVPAVALSELPSTQQPVT
FGKEDGGLEVFGDFFPEEPVSLPKKKKSKKPKENKSKGKRKKSEGSNDEPSGNEEDLEEK
SESEGSDYSPNKRKKKRLKDKREKKAKRKKKEEEEEENDDGGLKEPKSSGQLMAEWGLDD
VDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSS
AAAAAAAVAAAVETVTIAPPLAISPQQAPQPVPVRKAKTKEGKAEHLGGTPRAWAWAHSP
VISVLQSEEDEREESDLDSASIHSSSVRSECSAALVKKSKRRRKKKRIDDGDGYETDHQD
YCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEDDEEE
EAGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPP
LKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGAPPPKALEGIPEREFFVKWAGLSYWHCS
WVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDSKSEKRKSKDPLHAKMEERFYR
YGIKPEWMMIHRVLNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGH
RELMLGEDARLPKRLIKKGKKLKDDKQEKPPETPIVDPTVKFDKQPWYIDSTGGTLHPYQ
LEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINW
EREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLT
SYELITIDQAILGSVEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLE
ELFHLLNFLTPERFKELVHAQHGSGHRQACVAESQGVLEAPVLPNGSYDGSSLVKSSGKL
MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF
NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY
RFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVE
GMMSQGQRPITPVPDVQSSKGGTLPGGVKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLL
DRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRH
HYEQQQEDLARSLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEER
PEGQSGRRQSRRQLKSDRDKPLPPLLARXXXXLQVLGFNARQRKAFLNSIMRWGMPPQDA
FNSHWLVRDLRGKTEKEFRAYVSLFMRHLCEPGADGADTFADGVPREGLSRQHVLTRIGV
MSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKLGEVISSNPNTPVPASPAHIPTAPLGPP
DKMEAPLGYMDEKEPGMQKPKKPLEAQAPPTALDRVEGEDKNETSDSKESAREPRPEEPE
KAQSSPEQLPKEEALAEKDKVPDKLELSLLHSRGDGSDFRPDDTKVEEKEPVEPQQNGDR
EEGEEGRKEDRNGKFKFMFNIADGGFTELHALWQNEERAAVSSGKIYDIWHRRHDYWLLA
GIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQL
RRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEE
LLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQMYNSF
GPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggcctgggagagctctttgcaccgccgagctctggagacccccacttcggac
ctgggcccagcgcctgggcaggagggggcgggggtggcggcccggtgcaagcggcggcgt
ccccgcctcctgctgtgcccgcactcgctggggtctcagatgccagctcagccaccgggt
cttgggggcgcgcgggagcctcgacggctcctcctgcaggagcgcctagttctcaccctc
cagcccgcggctctggactactcctcgcgctctcgccccgctgccgcgcgcctcggggct
ccagggcgcgctgggtggggccgcgccgggcgggtacaggccgaactggaggacccgtcg
agcgccctggccgggccgttgtggtcgccggtccggagcactttgccgaggctgccggcg
ggccaccccctggcgcatcctagagcccgcgtctgcccgctgccccaggccgcccagagc
ccttccctagtccctgctgtggccctctcagagctgccctccactcagcagccggtcacc
ttcggaaaagaagatggtggccttgaagtcttcggggactttttccctgaggagcccgtg
agcctccccaagaagaagaaatccaagaagcccaaggagaacaaatccaaagggaagcgg
aagaaaagcgaggggagcaacgatgagccgtcaggaaacgaggaggacctggaggagaag
tcggagagcgagggcagcgactactctcccaataagaggaagaagaagaggctcaaggac
aagagggagaaaaaagccaagcggaagaagaaggaggaggaggaggaggagaacgacgac
ggaggcttaaaggagcccaagtcctcagggcagctcatggccgagtggggcctggacgac
gtggactacctgttctccgaggaagactaccacacgctaaccaactacaaggccttcagc
cagttcctcaggccactcatcgccaagaagaacccgaagatccccatgtccaagatgatg
accgtcctgggcgccaagtggcgggagttcagcgccaacaaccccttcaagggcagctcg
gcagcagcagctgcggctgccgtggctgcggcagtagagacggtcaccattgccccccct
ctggccatcagcccccagcaggcaccccagccggtaccagtccgcaaggccaagaccaag
gagggcaaggcggagcacctgggaggaacccctcgggcctgggcctgggctcacagcccc
gtcatctccgtcctgcagagcgaggaggatgagcgggaggagtccgacttggacagtgcc
agcatccacagctcctccgtgcgttctgagtgctccgcagccctggtgaagaagagcaag
aggaggcgcaagaaaaagaggattgacgatggtgacggctacgagaccgaccaccaggac
tactgcgaggtgtgtcagcaaggtggggagatcatcctgtgtgacacgtgcccgcgggcc
taccacctcgtctgcctggacccggagctcgagaaggcccccgagggcaagtggagctgc
ccgcactgcgagaaggaggggatccagtgggaaccgaaagaggaggacgacgaggaggag
gaggccggctgcgaggaggaggaggacgaccacatggagttctgccgcgtgtgcaaggac
ggtggcgagctgctgtgctgcgacgcctgcccctcctcctaccacctgcactgcctcaac
ccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgtacttgtccccct
ctgaagggcaaagtgcagcggatcctacactggaggtggacagagcccccggcccccttc
atggtggggctgccagggcctgatgtggagcccggggcacctccgcccaaggccctggag
ggcatccctgagagagagttctttgtcaagtgggcagggctctcctactggcactgctcc
tgggtgaaggagctgcagctggagctctaccacacggtgatgtaccgcaactaccaaaga
aagaacgacatggacgagccgccgcccttcgactacggctcaggcgacgaggacagcaag
agcgagaagaggaagagcaaggacccgctgcacgccaagatggaggagcgcttctaccgc
tacggcatcaagcccgagtggatgatgatccaccgcgtgctgaaccacagctttgacaag
aagggggacgtccactacctgatcaagtggaaagatctgccctacgaccagtgcacctgg
gagattgatgacatcgatatcccctactatgacaacctgaagcaggcctactggggccac
agggagctgatgctgggagaagatgccaggctgcccaagcggctgatcaagaagggcaag
aagctgaaggatgacaaacaggagaagcccccagagacccctattgtggatcccacggtc
aagttcgacaagcagccgtggtacatcgactccacaggcggcacgctgcacccctaccag
ctggagggtctcaactggctgcggttctcatgggcccagggcaccgataccatcctggcc
gacgagatggggctgggcaagacggtgcagactatcgtcttcctctactccctctacaag
gagggccactccaaagggccctacctggtcagcgcccccctgtccaccataatcaactgg
gagcgtgagttcgagatgtgggcacctgacttctatgtggtcacttacactggggacaag
gagagccgctcggtgatccgagagaacgagttttcctttgaggacaacgctatccggagt
gggaagaaggtattccgcatgaagaaagaagtgcagatcaagttccacgtgctgctcacc
tcctacgagctcatcaccatcgatcaggccatcctgggctccgtggagtgggcctgcctg
gtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttcagggtcttgaac
agctacaagatcgactacaagctgctgctgacggggacgccccttcagaacaacctggaa
gagctctttcatctgctcaacttcctgaccccggagaggttcaaagagctcgtgcatgcc
cagcatggctcggggcaccggcaggcctgtgtggctgagagccaaggcgtgctggaagcg
ccggtcttgcccaatggctcctatgatggcagctccctggtcaagtcttccgggaagctc
atgctgctgcagaagatgctcaagaagctgcgggatgaagggcaccgcgtgctcatcttc
tcccagatgaccaagatgctggacctgctggaggacttcctggagtatgaaggctacaag
tacgagcgcatcgatggtggcatcactgggggcctccggcaagaggccatcgacagattc
aacgccccgggggcccagcagttctgcttcctcctctccacccgggccggcgggctgggc
atcaacctggctactgcggacacggtcatcatatatgattcggactggaatccgcacaac
gacattcaggccttcagccgtgcccaccgcatcgggcagaacaagaaggtgatgatctat
cgctttgtgacgcgggcatcagtagaggagcgcatcacgcaggtggccaagcgcaagatg
atgctgacccacctggtggtgcggcccgggctgggctccaagtcaggctccatgaccaag
caggagctggatgacatcctcaagttcggcaccgaggagctgttcaaggatgatgtggag
ggcatgatgtcccagggccagaggcccatcacacctgtcccagatgtccagtcctctaaa
gggggcaccctgcctggcggcgtgaaaaaaaaacacggcagcaccccgccaggtgataac
aaggacgtggaggacagcagtgtgatccactacgacgatgccgccatctccaagctgctg
gaccggaaccaggatgccaccgatgacacggagctgcagaacatgaatgagtacctgagc
tccttcaaggtggcgcagtacgtggtgcgagaggaagatggcgtggaggaggtggagcgg
gagatcatcaagcaggaggagaacgtggacccggactactgggagaagctgctgaggcac
cactacgagcagcagcaggaggacctggcgcgcagcctgggcaagggcaagcgcatccgc
aagcaggtcaactacaacgacgcctcgcaggaggaccaggagtggcaggacgagctctcc
gacaaccagtccgaatattccatcggttctgaggatgaggatgaggactttgaggagagg
ccggaggggcagagtggacggcgacaatcccggaggcagctgaagagcgacagggacaag
cctttgcccccgcttcttgctcgannnnnnnnnnccctccaggtgctgggcttcaatgcc
cggcagcgcaaggcctttctgaactccatcatgcggtggggcatgccccctcaggacgcc
ttcaactcccactggctggtgcgggaccttcgagggaagaccgagaaggagtttcgagcc
tacgtgtccctcttcatgcggcacctgtgtgagccgggcgcagatggtgcggacactttt
gcggacggtgtgccccgggagggcctctcgagacagcacgtgctcacgcgcattggggtc
atgtcactggtgaggaagaaggtccaggaatttgaacatgtcaatgggaagtacagcacc
ccagacttgatccctgaggggcctgagggcaagaagctgggagaggtcatctcctcgaac
cccaacacaccagtgcctgccagccccgcccacatcccaactgcccctctgggcccgcca
gacaagatggaagccccgctgggctacatggacgagaaggagccagggatgcagaagcca
aagaagcccctggaagctcaggccccgccaactgctctggacagagtggagggcgaggac
aagaatgagacctcagacagtaaggagagtgcccgagagccgcggccggaggagccagaa
aaggcccaatcctccccggagcagctgcccaaagaggaagcgcttgccgagaaggataag
gttccggacaagctggagttaagcttgcttcacagcagaggggacggcagtgatttcagg
ccagatgacaccaaggtggaggaaaaggagccagtagagccccagcagaacggggacaga
gaggagggtgaggagggcaggaaggaggaccggaatgggaagttcaagttcatgttcaac
atcgctgacgggggcttcacagagctgcacgcgctgtggcagaacgaggagcgagctgcc
gtgtcctccgggaaaatctacgacatctggcaccggcgccacgactactggctgttggcg
ggcattgtgacccatggctacgcccgctggcaggacatccagaatgacccgcggtacatg
atcctcaacgaacccttcaagtctgagatccacaagggcaactacctggagatgaagaac
aagttcctggcccggaggttcaagctgctggagcaagcgctggtcattgaggaacagctg
cggagggccgcgtacctcaatatgacccaggaccccaaccacccggccatggccctcaac
gcccgcctggctgaggtggagtgccttgctgagagccatcagcacctgtccaaggagtcc
ctggccgggaacaagcctgccaatgccgtcctgcacaaggttctgaaccagctggaggag
ctgttgagtgacatgaaggctgacgtgacccgcttgccctccatgctgtcccgcatcccc
ccggtggctgcccgcctccagatgtcagagcgcagcatcctgagccgcctgactaaccgt
gccggtgacccgaccatccagcagggcgctttcggctcctcccagatgtacaacagcttt
gggcccaacttccggggccctggaccgggagggattgtcaactacaaccagatgcccctg
gggccctatgtgaccgatatctag
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integrated database retrieval system
