Echinops telfairi (small Madagascar hedgehog): 101654429
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Entry
101654429 CDS
T08707
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101654429 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etf04121
]
101654429 (TRIM54)
Ubiquitin system [BR:
etf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101654429 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
TRIM_CC
CoiA_N
DUF349
PHP
zf-RING_6
Sina_RING
SpoIISA_toxin
COG2_C
DUF1421
DUF5799
FlgN
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101654429
NCBI-ProteinID:
XP_004710281
UniProt:
A0ABM0IXU0
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANLMPQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLNSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFRPGASGEDEDDEVLLDRDGGGPAPEEERTDAA
DGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaccgtgggcttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgcgccaatctcatgccacaggcctcgaaccct
ctgtggcaatcccggggctccaccactgtgtcttcaggagggcgttttcgctgcccatct
tgcaggcatgaggttgtcctcgaccgacacggagtctacggcctgcagcgaaacctgctg
gtggagaacatcatcgacatttacaagcaggaatcttccaggccactgaactccaaggct
gagcagcacctcatgtgcgaggaacatgaagaagagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gccccacttcccaccatttacaaacgccagaagagtgagctcagcgatggcatcgcaatg
ttggtggcaggcaacgaccgtgtgcaagcagtgatcacacagatggaggaggtgtgccag
accatagaggacaacagtcggcggcagaagcagttgctaaaccagaggtttgagaccctg
tgtgccgttctggaggagcgcaagggcgagttgctgcaggcgctggcccgggagcaggag
gagaagctgcagcgcgtgcgcggcctcatccgccagtacggagaccacctggaggtgtcc
tccaagctggtggagtcggccatccagtccatggaggagccgcagatggcgctctacctc
cagcaggccaaggagctgatcaataaggtggggacgatgtcgaaggtggagctggccggc
cggccggagccgggctacgagagcatggagcagttttccgtgagcgtggagcacgtggcc
gagatgctgaggaccatcgacttccggcccggcgcttcgggagaggacgaggacgacgag
gtgttgttggacagggacggcggcggcccggcgcccgaggaagagcggacggacgcggca
gacggcctgcactga
DBGET
integrated database retrieval system
