Echinops telfairi (small Madagascar hedgehog): 101654982
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Entry
101654982 CDS
T08707
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101654982 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etf04121
]
101654982 (TRIM55)
Ubiquitin system [BR:
etf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101654982 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
Cbl_N
Motif
Other DBs
NCBI-GeneID:
101654982
NCBI-ProteinID:
XP_004697597
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGSTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD
QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAVLV
GSNDRVQGVISQLEDTCKTIEECCRNQKQELCEKFDYLYGILEERKNDMSRVITRTQEEK
LEHVRALIKKYSDHLENVSKLVESGIQVMDEPEMAVFLQNAKILLKKISEASKAFQMEKI
EHGYENMHHFTVNLNREEKIIREIDFYREEEDEEEEGDGELEGGGEDVVEVEEVETESGV
RTEASGEDESPEKASTPCPLASAFQEVPGPLPVFSVEPTAALPAAAEPLGTQGEVVPSGS
QQTTESETPALDASEATDPLFYPSWYKGQTWKAANPPSTAGSEGLGQVGPPGSEDSHEQK
AEVAEAAANERAAESGKETSSPAATSQIGIEAPPLQGQAAASGSSEGAVSEPARHVFSFS
WLNSLSE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtctctgaactacaagtctttttccaaagagcagcagaccatggataacttg
gagaagcaactcatctgccccatctgcttagagatgttcacgaagcctgtggtcattctc
ccctgtcagcataacctgtgcaggaaatgcgccagtgatatcttccaggcctctaacccg
tacctgcccaccagaggaggcagcaccgtggcgtcagggggccggttccgctgcccatcc
tgcagacacgaggtggttttggacagacatggggtgtacggacttcagcggaatctgctg
gtggaaaatatcatcgacatctacaagcaggagtccacaagacctgaaaagaagtctgac
caacccatgtgtgaggagcacgaggaagagcgcatcaacatctactgtctgaattgcgag
gtgcctacctgctctctttgcaaggtttttggggctcacaaagattgtcaagtggctccc
ctcactcatgtattccagagacaaaagtctgaactcagtgatggtattgccgttcttgtt
ggcagcaacgacagagtccagggagtgatcagccagctggaagacacctgtaaaacgatt
gaggaatgctgcagaaatcagaagcaggagctgtgtgagaagtttgattacctctatggc
atcctggaggagaggaagaatgacatgagtcgagtcatcacccggacgcaagaggagaag
ttggaacatgtccgagctctgatcaaaaagtattctgatcatttggagaacgtgtccaag
ttggttgagtctggaatccaggtcatggatgaaccagaaatggcagtgtttctgcagaat
gcgaaaatcctgttaaaaaaaatttccgaagcatcgaaggcatttcagatggagaaaata
gaacatggttatgaaaatatgcaccacttcacagtcaacctcaatagagaagaaaaaatt
atacgagaaattgatttttacagagaagaagaagatgaagaggaagaaggagatggggag
ctagaaggaggaggagaagacgtagtagaagtggaagaggtagaaacagagtcgggagtt
cgaacagaggcttccggagaagatgagagtccagagaaagcctctaccccctgtccgctg
gcctctgcgttccaggaggtgccagggccacttcctgttttctctgtggagccaactgca
gccctgccggctgctgctgagcccctgggaacccagggggaggtggtgcccagtggctct
cagcagaccacagagtctgaaactccagcccttgacgcatcggaagctacggatcccctg
ttttaccctagttggtataaaggccaaacctggaaagctgccaacccaccttccaccgca
gggagcgaaggtctgggacaagtagggcctccaggttcggaggattcccatgagcagaag
gcagaagtggcagaagccgcagccaatgagagggcagcagagagtggtaaggaaactagt
tcacctgcagctacttctcagattggaattgaagccccgcctctccaaggacaagctgca
gcttcagggagcagtgagggagctgtttctgagccagctcgccacgtcttctccttttcc
tggttaaactccctgagtgaatga
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