Echinops telfairi (small Madagascar hedgehog): 101655135
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Entry
101655135 CDS
T08707
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03013
Nucleocytoplasmic transport
etf05014
Amyotrophic lateral sclerosis
etf05200
Pathways in cancer
etf05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101655135 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101655135 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
101655135 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101655135 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101655135 (TPR)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101655135 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Imm70
Motif
Other DBs
NCBI-GeneID:
101655135
NCBI-ProteinID:
XP_004706724
LinkDB
All DBs
Position
Unknown
AA seq
2434 aa
AA seq
DB search
MPSSGLVSRNRQRGRPMTSRGYEGSRRGSLRRAGSRELQGEATETAALPSGFAWPSSCFS
AASTAAAAPGPADMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFK
VESEQQYFEIEKRLSHSQERLVNETQECQNLRLELEKLNTQLKTLTEKNKDLEIVNDRNI
TFQTQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLHEKLKDSTTTKGELQLRLD
ELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKSNLE
NKKEEVSRMEEQMNGLKTSNEHLQKHVEDLLIKLKEAKEQQASMEEKFHNELNAHIKLSN
LYKSAADDSEAKSSELTGAVEELHKLLKEAGEASKAIQDHLLEVEESKDQMEKEMLEKIG
KLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQD
QLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQR
MREDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADIS
SSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETKEREEKESTSSKITELQLKLENAL
TELEHLRESRQQQAHLADSIVRQRDMYRILLSQTTGVVIPLQTSNLEDISLLSTPKRAST
SQTVSTPAPVPVTESTEAIEAKAALKQLQEIFENYKKEKTDNEKIQNEHLEKLQEQVTEL
RSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTGTTQKQEQIINTMTQDL
RGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILE
RSETESKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTESNLH
LNTKELLKNAQKENAAMKQHLSNIEAQLASQSSQKTGKGQAIDKEDADELRSQLRQTEEQ
VNDLRERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKK
LMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSNVQSEVQEALQRASAALSNEQQARRD
CQEQAKIAVESQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQLLES
KASWEERERVLKDEVSKSVSRCDDLEKQNRLLHDQIEKLSDKVVASMKEGAQGSLNVSFS
EEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAERE
KVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPL
QEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKR
IQQLTEEIGKLKAEIARSNASLTNNQNLIQSLREDLNKLRTEKENIQKDLDAKIVDIQEK
VKTITQVKKIGRRYKTQYEELKAQQDKVVETSAQSSGDHQEQHISVQEIQELKETLNQAE
TKTKSLENQVENLQKTLSEKEVEVKNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQIT
EKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYE
GRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSEPPTA
NIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQE
AMQSEGPVEHVPVFGSTSGSVRSTSPNIQPSISQPILTVQQQTQATAFVQPTQQSHPQIE
PTNPEISANIVEVVQSSPIERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIETSDQVS
DDAVEMPVSKKLKSVTPVGPEEEVMAEESTDGEVETQVYTQDSQDSIGEGVTQGDYTPME
DSEETSQSLQIDLGTLQSDQQTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYEED
EEEDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGEGTDPGTETEESLGGGESN
QRAADSQNSGDGNSGTVESSFTQEISREQQPSSASERHAPRAPQSPRRPPHPLPPRLTIH
APPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDG
FAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGG
RSVPTTPLQVAAPVTVFTESATSDASEHASQSVPMVTTSTGTSSTTNETAAGDDGDEVFV
EAESEGISSEAALEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSQPKPFRRVRLQ
AAPRQGVRGRHFNRQRGVSHAMGGRGGINRGNIN
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggcttagtgtctagaaaccgccaaagaggacgacccatgacgtcccga
ggctacgaagggtctcgccgcgggagtctgaggcgggcaggctcccgggagctccagggt
gaagcgacggagacagcggcgctgccttctgggttcgcctggccctcgtcttgcttcagt
gctgcctcaacggctgctgcggcccccggcccggctgacatggcggcggtgttgcagcaa
gtcctggagcgcacggagctgaataaattgcctaaatcggtccagaacaagcttgagaag
ttccttgctgaccagcagtccgagatcgatggcctgaaagggcggcacgagaaattcaag
gtggagagcgaacaacagtattttgagatagagaagagactatcccacagtcaagagagg
cttgtgaatgaaactcaagaatgtcagaacttgcgacttgaactagaaaaacttaacact
cagctgaagacactaactgagaaaaacaaagaccttgaaattgtcaatgatcgcaatatt
acctttcagactcaatttacaagaactaaggaagaattagaagctgagaaaagagattta
attagaaccaatgagagactatctcaagaacttgaatatttaacagaggatgttaaacgt
ctgcatgaaaaacttaaagatagcacgacgacgaagggtgagcttcagttaagattagat
gaacttcaagcttctgatgtttctgttaagtatcgtgaaaaacgtttggagcaagaaaag
gagttactacataatcagaatacatggttgaatacagagttgaaaaccaaaactgatgaa
ctgctggctcttggtagagaaaaaggaaatgagattctagagcttaaatctaatcttgaa
aacaaaaaggaagaggtttctagaatggaagaacagatgaatggcttgaaaacttcaaat
gagcatcttcaaaagcatgtagaagatctgttaatcaaattgaaagaggccaaggaacaa
caggccagtatggaagagaagttccacaatgaattgaatgctcacataaagctctctaat
ctgtacaagagtgctgctgatgactcagaagcaaagagcagtgaattgaccggagcagtg
gaagaactacacaaacttttgaaagaagctggagaagccagcaaagcaatacaagatcat
cttctggaggtggaagaatctaaagatcaaatggaaaaagaaatgcttgagaaaataggg
aaattagagaaggaactggaaaatgcaaatgacttgctttctgctacaaaacgtaaagga
gccattttatctgaagaagaacttgctgccatgtctcctactgcagcagctgttgctaag
atagtgaaacctggcatgaaattaactgagttgtataatgcctatgtggaaacacaggac
cagttgcttctggaaaaactggagaacaaaagaattaataagtatttagatgaaatagtg
aaagaagttgaagccaaagcaccgattttaaaacgacaacgtgaagagtatgaacgtgca
cagaaagctgtggcaagtttatctgttaagcttgaacaagctatgaaggagattcagcga
atgagggaagatactgataaagcaaacaaacattcttctgttcttgaaagagataatcaa
agaatggaaatacaaataaaagatctttcacaacagattagagtgcttttgatggaactt
gaagaagcaaggggtaaccatgtaattcgtgatgaggaagtaagctctgctgatataagt
agctcatctgaagtaatatcacagcacctagtttcgtacagaaatattgaagagcttcaa
caacagaatcagcgtcttttagtggctcttagggaacttggagaaactaaagaaagagaa
gaaaaagaatcaacttcatccaaaatcactgaacttcaactcaaacttgagaatgctctc
actgaattggaacatcttcgtgagtcccgacagcaacaggcgcatcttgccgattccata
gttcgtcagcgtgacatgtaccgtattttgttgtcacaaacaacaggagttgtcatccca
ttacaaacttcaaatttagaagatatctctcttctgtcaactccaaaacgtgcaagtaca
tcacaaactgtttccactcccgctccagtgcctgttactgagtcaacagaggctatagaa
gctaaggctgcccttaaacagttacaggaaatttttgagaattacaagaaagaaaagaca
gataatgaaaagatacaaaatgagcatcttgagaagcttcaagaacaagttacggaactg
cgatcacaaaataccaaaatttctactcagctagattttgcttccaaacgttatgaaatg
ctacaagataatgttgaaggataccgtcgggaaataacatccctacatgagagaaatcag
aaactcacgggaacaactcaaaaacaggaacagatcatcaatactatgactcaagatttg
agaggagcaaatgaaaagctagctgttgcagaagtaagagctgaaaatttgaagaaggaa
aaggagatgcttaagttatcagaagttcgtctttctcagcagagagagtctttgttagcg
gagcaacgcgggcaaaacttgttgctaactaatctgcaaacaattcagggaatactagag
cgctctgaaactgaaagcaaacagaggctgagtagccagatagaaaaactggaacatgag
atatctcatctaaagaagaagttggaaaatgaagtggaacaaaggcatacccttactaga
aatctggatgttcagcttttggatacaaagaggcagctggatactgagtcaaatcttcat
cttaacactaaagaactactaaaaaatgctcaaaaggaaaatgctgcaatgaaacaacac
ctcagtaatatagaagcccaacttgcttctcagtcctcacaaaaaactgggaaaggtcag
gctattgacaaagaagatgcagatgaacttcggagtcagctaagacaaacagaagaacag
gtgaatgatttgagggagagactaaaaacaagtactagtaatgtggaacagtaccgagca
atggttactagtttagaagaatccctcaacaaggaaaaacaggttacagaagaagtacgc
aagaacattgaagttcgtttaaaagagtcagccgagtttcaaacacaattggaaaagaaa
ttaatggaagtagaaaaggaaaaacaagaacttcaggatgacaagagaaaagccatagag
agcatggaacaacagttatctgagttaaagaaaacattgtcgaatgttcagagtgaagtt
caggaagcccttcaaagagcaagtgcagctttgagtaatgagcagcaagccagacgcgac
tgtcaagaacaagctaaaattgctgtggaatctcagaataaatatgaaagagaattaatg
ctacatgctgctgatgttgaagctctacaagctgccaaggaacaggtttcaaaaatggca
tcagtccgtcagcatttggaagaaacaacgcagaaagcagaatcacagttgttagagagt
aaagcatcttgggaggagagagaaagagtgttaaaggatgaagtttccaagagtgtgtca
cgctgtgacgatctagagaaacaaaaccgattacttcatgatcagattgaaaagttgagt
gacaaggtagttgcctctatgaaggaaggtgcacaaggctccttaaatgtatcctttagt
gaagaaggaaaatctcaagaacaaattttagaaattctcagatttatacggagagaaaaa
gaaattgccgaaactaggtttgaagtggctcaagttgagagtctgcgttatcgacaaagg
gtggaacttttagaaagagagcttcaggaactgcaggatagtctcaatgctgaaagggag
aaagtgcaggtaactgcaaaaacaatggcccagcatgaagaactgatgaagaaaacagaa
accatgaatgtggttatggagaccaataaaatgctaagagaagaaaaggaaagactggaa
caggatctacaacagatgcaagcaaaggtgaggaaactggagttagatattttaccttta
caagaagcaaatgctgagctgagtgagaaaagtggtatgttgcaggcagagaagaagtta
ctagaagaagatgttaaacgttggaaagcacgtaaccagcatctagtaagtcaacaaaaa
gatccagatacagaggaatatcggaagctgctttctgaaaaggaagttcacaccaagcgt
attcagcagctaacagaagaaattggaaaacttaaagctgaaattgcaagatcaaatgca
tctttgacaaataaccagaatttaatccagagtctaagggaagatttaaataaactcaga
acagaaaaggaaaacattcagaaggacttggatgcaaaaatagttgatatccaagaaaag
gttaaaactattactcaagtcaagaaaattgggcgtaggtacaagactcaatatgaagaa
cttaaagcacaacaggataaggtcgtagagacctcggctcagtcttctggagatcatcag
gagcagcatatctcagtccaggaaatccaggagctcaaagaaaccctcaaccaagctgag
actaaaacaaaatcactggagaatcaagtagaaaatcttcagaagacattatctgaaaaa
gaagtggaagtaaaaaatcttcaagaacaaactgtgcaactacaatctgaactctcacga
cttcgtcaggatcttcaagatagaaccacacaggaggagcagctaagacaacagataacg
gaaaaggaagaaaaaacaagaaaggctattgtagcagcaaaatcaaaaattgcacactta
gctggtgtaaaagatcagctaactaaagaaaatgaggagcttaaacaaagaaatggagcc
ttagatcagcagaaagatgaattggatgtacgtatgactgctcttaagtcccagtatgaa
ggtcgaattagtcgtttggaaagagaacttagagaacatcaagagagacacctggagcaa
agagatgaaccgcaagaacctactaataaggtcccagaacaacagagacagatcacattg
aaaaccactcctgcttctggtgaaagaggaattgccagcacatcagaaccaccaacagcc
aatatcaagccaactcctgttgtgtctacccccagcaaagtaactgctgcagctatggct
ggaaataagtccacacccagggctagtatacgcccaatggttacacctgcaactgttaca
aaccctacaactactccaacggctacagtgatgcccacaacacaagtggaatcacaagaa
gctatgcagtcagaagggcctgtggaacacgttccagtttttggaagtacaagtggatct
gttcgttctactagtcctaacatccagccttccatctctcaacccattttaactgttcag
caacaaacacaagctacggcttttgtgcaacctactcaacagagtcatcctcagattgag
cctacaaatccagagatctctgcaaacatagtagaagttgttcagagttcaccaattgag
cggccttctacttccacagcagtttttggcactgtttcagcaacccctagttcttctttg
ccaaaacgtacacgtgaagaggaggaagatagtaccatagaaacatcagaccaagtgtct
gatgatgcagtggaaatgcctgtttcaaagaaactgaaaagtgttacacctgtaggacct
gaggaagaagttatggcagaagaaagtactgatggagaggtcgagactcaagtatacacc
caagattcacaagattccattggagaaggagtcactcagggagattacactcccatggaa
gacagtgaagagacttctcagtcccttcagatagatcttggaacccttcaatcagatcag
caaacaacttcatcccaggatggtcaaggaaagggagatgatgtcattgttattgacagt
gatgatgaagaagaggatgacgatgaaaatgatggagaacatgaggattatgaagaggat
gaggaagaagatgatgatgatgaagatgacacagggatgggggatgagggtgaagacagt
aatgaaggaactggtagtgcagatggtaatgatggatatgaggctgatgatgctgagggt
ggtgaaggaactgatcctggtacagaaacagaagaaagtttgggtggaggcgaaagtaat
cagagagctgctgattctcaaaacagtggtgatggaaattcagggactgtagagtcttcc
tttactcaggagatttctagagaacagcagccatcatcagcatccgaaagacatgcccct
cgagcacctcaatcaccaagacgtccaccacacccacttcccccacgactgaccattcac
gccccacctcaagaattgggaccaccagttcagagaattcagatgactcggaggcaatct
gtgggacgtgggcttcagttaactccaggaataggtggcatgcagcagcatttttttgat
gatgaagatagaacagtgccaagtaccccaactcttgtggtgccacatcgtactgatgga
tttgctgaagcaattcattccccacaagttgctggtgttcctagattccggtttggtccc
cccgaagatatgccacaaacgagttctagtcactctgatctcggccagcttgcttctcaa
ggaggtttaggaatgtatgaaacacccctcttccttgctcatgaagaagagtctggtggc
cgaagtgtccccactactcctctacaagtagcagccccagtcactgtgtttactgagagt
gcgacttctgatgcttcagaacatgcctctcagtctgtcccaatggtgacaacttccact
ggcacttcatccacgacaaatgaaacagcagcaggtgacgatggagatgaagtatttgtg
gaggcagaatctgaaggtattagttcagaggcagccctagaaatcgatagccaacaggaa
gaagagcctgttcaggcatctgatgaatcggatcttccctctaccagccaagatccccct
tccagctcttctgtagatactagtagtcaaccaaagcctttcagacgagtaagacttcag
gctgcaccaagacaaggtgtccgtggtcgtcactttaataggcagcgaggtgtgagccat
gcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
