Echinops telfairi (small Madagascar hedgehog): 101656181
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Entry
101656181 CDS
T08707
Name
(RefSeq) polypyrimidine tract-binding protein 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101656181
03041 Spliceosome [BR:
etf03041
]
101656181
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101656181
Spliceosome [BR:
etf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101656181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
101656181
NCBI-ProteinID:
XP_004706479
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MDGIVPDIAVGTKRGSEELFSACVTNGPFIMSSNSASAANGNDTKKFKGDSRSSGAPSRV
VHVRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYYASVAA
MLRGQPIYIQFSNHKELKTDGSPNQARAQAALQAVNSVQSGSLALAASAAAVDAGMAVAG
QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKL
SLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGA
PGIISASPYAGAGFPPTFAIPQAADLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG
AGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKVLFNKKENALVQMADGSQAQLAMSH
LNGHKLHGKPVRISLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPS
ATLHLSNIPLSISEDDLKILFSSNGGLVKGFKFFQKDRKMALIQMGSVEEAIQALIELHN
HDLGENHHLRVSFSKSTI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcgttccagacatagcagttggtacaaagcggggatctgaagagctcttc
tctgcctgcgtcaccaacgggccctttatcatgagcagcaactccgcgtctgcagccaac
gggaacgacaccaagaagttcaaaggtgacagccggagctcgggtgccccttctcgcgtg
gtgcatgtccgcaagctgccaggcgatgtcaccgagggggaggtcatctccctggggctg
cccttcgggaaggtgaccaacctgctgatgctgaaggggaagaaccaggccttcatcgag
atgaacacggaggaggcggccaacaccatggtgaattactactacgcctcggtggctgcc
atgctgcgtgggcagcccatctacatccagttctccaaccacaaggagctcaagacggac
ggctcgcccaaccaggcgcgcgcccaggccgccctgcaggcagtcaactcggtgcagtcc
gggagcctggcactggccgcctcggctgccgccgtggacgctggcatggctgtggcgggc
cagagccctgtgctgcgggtcattgtggagaacttattctacccggtgacgctggatgtg
ctgcaccagatcttctccaagtttggcacggtgctcaaaatcatcactttcaccaagaac
aaccagttccaggcacttctgcagtatgccgaacctgtcagcgcccagcacgccaagctg
tccctggacggccagaacatctacaacgcctgctgcacgctgcgcattgacttctcaaag
ctcaccagcctcaacgtcaagtacaacaacgacaagagccgagactacactcggcctgac
ctgccttcaggggatagccagccatctctggaccagaccatggctgcagcctttggtgca
cctggtataatctcagcctcaccatacgcaggagccgggttccctcccacctttgccatc
ccacaggccgcagacctctcggttcctaatgtccatggcgctctggcccccctggccatt
ccttcagctgctgctgcagcagcagcagcaggccgcatcgccatcccaggcctggcagga
gccggcaattctgtcctgctcgttagcaacttgaacccagagagagtcacgccccaaagc
ctctttattctcttcggcgtgtacggggacgtgcagcgcgtgaaggtcctgttcaataag
aaggagaacgccctggtgcagatggccgatggcagccaggcccagctggccatgagccac
ctgaacggacacaagctgcacgggaagcccgtgcgcatctcgctgtccaagcaccagaac
gtgcagctgccccgagagggccaggaggaccagggcctgaccaaggactacggcaactcg
ccactgcaccgcttcaagaaacccggctccaagaacttccagaacatcttcccgccctcc
gccaccctgcacctctccaacatcccgttgtccatatccgaggacgatctcaagatcctc
ttctccagcaatggtggcctggtcaagggcttcaagttcttccagaaggaccgcaagatg
gcgctgatccagatgggctccgtggaggaggccatccaggcgctgattgagctgcacaac
cacgacctgggcgagaaccaccacctgcgggtctccttctccaagtccaccatctag
DBGET
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