Echinops telfairi (small Madagascar hedgehog): 101656327
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Entry
101656327 CDS
T08707
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X2
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101656327 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etf03036
]
101656327 (CHD8)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101656327 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
101656327
NCBI-ProteinID:
XP_004698508
LinkDB
All DBs
Position
Unknown
AA seq
2568 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDHMNQDGGGGDVGN
SSASDLVPPPEETVPPEIPKESAAPEPLTLHDFTTQPASQEQPAQPVLQTTTPTSGLLQV
SKSQEILSQGNPFMGVSATTVSSSTGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQAQGI
TSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQATVQRIVQPSR
PVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQGHR
HVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSSQPQ
PQQPTSAQPVTLSSVQQAQIMAPGPSPGQRLSVPLKVVLQPQAGSSQGASSGLSVVKVLS
ASEVAALSSPASSAHPGGKTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVL
NEDELPSVRPEEEGEKKRRKKGSGERLKDEKPKKSKTSGTSKTKGKSKLNTITPVVGKKR
KRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEEVDV
TGPIKPEPILPEPIQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSGQYTE
AEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYV
EVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPE
LKRVNRPQASSWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTI
QSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEM
YCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSL
KHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQQLQAI
LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNL
LNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPK
LRAGGHKVLIFSQMVRCLDILEDYLIQRRYFYERIDGRVRGNLRQAAIDRFSKPDSDRFV
FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYE
REMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSK
FCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADLD
MDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHAYGRT
DCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIKGFI
WDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTLFQDE
SYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGTIASEIDIWFPVVDQLEVPTTW
WDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSDLVEG
VDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDAEEAQVTQQPGHLFWPPGSA
LTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTRREQT
DFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLPPAA
GDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLSLCQPPGPELPKWW
EPIRHDGELLQGAARHGVSQTDCNIMQDPDFSFLAARMSYMQNQQAGAPAPSLSRCSTPL
LQQQYTSRTASPLPLRQDALVEKLPEETAAQVPSLESLTLKLEHEVVARSQPTPQDYEMR
VTSSDTTPLVSRSVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEA
KLTADRPRTKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRASEWPKDRVLINR
IDLVCQAVLSGKWPSSRRSQEMATGGILGPTNHLLDSPSVTPGEYGDSPVPTPRSSSAAS
MAEEEASAVSTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMANGVMGDGHPLF
HKKKGSRKKLVELEVECMEEPNHLAVDLETRIPVINKVDGTLLVGEDAPRRAELEMWLQG
HPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGMEPVQRTNSRNGKKGHHAETVFN
RVLPGPIAPESSKKRARRMRPDLSKMMALMQGGGTGSLSLHNTFQHSSSGLQSVSSLGHS
SATSASLPFMPFVMGGAASSPHVDSSTMLHHPHHHHHPSLRATGYPSSPATTTSGAALRL
PPLQPEDDDDDEEDDDLSQGYDSSERDFSLIDDPMMPANSDSSDDADD
NT seq
7707 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgtttgatgacccaaatttatttggcctggactctctg
actgatgacagcttcaaccaggtcacgcaagaccccatagaggaagcccttggactgcca
agctctctggactccttggatcacatgaaccaggatggtggaggtggtgatgtggggaat
tcatcagccagtgacctggtccctccaccagaggaaacagtccctccagaaattcccaaa
gaatcagcagctccagaacctttaaccttgcatgattttaccactcagcctgccagccag
gagcagccagcccagcctgtcttacagacaacgacgccgacatcaggacttttgcaggtc
tccaagagccaagagatcctgagccaagggaatcctttcatgggtgtctctgccacaact
gtctccagtagcactggaggacagccacctcaatcagcccctaagattgttatcctcaag
gccccaccaagctcctcagtcactggtgcccatgtggcacaaattcaggcccaaggtatc
accagcacagctcagcccctggtggctggcacagccaatggtggaaaagttacttttacc
aaagtgctaaccggcaccccccttcgaccaggtgtttccattgtctctggtaatacagtg
ttggccgccaaggtccctgggaaccaggctactgttcagcgcattgtccagcccagccga
ccagtaaagcagctggtcctccagccagttaagggttcagctcctgctggaaaccctggg
gccacagggcccccactgaagcctgcagttacactgacctctacacctacccagggtgaa
tcgaaacgcatcaccctggtcctccagcagccacagtctggaggtccccaaggacaccgg
catgtcgtgctaggaagtttaccaggcaagatagtgttacagggcaaccagcttgcagcc
ctgactcaagccaagaatgcccaggggcagcctgccaaagtagttaccatccagctgcag
gtgcagcagccacagcaaaaaattcagattgtaccacaacctccttcatctcagccccag
ccccagcagccaacctcagctcagccagtgacgctctcctctgtgcagcaggctcagata
atggcaccaggaccaagcccgggacaaagactttcagtgcctctcaaggtggtgctgcag
ccacaggctggctcttcccaaggggcctcttcagggctctctgtagttaaagttctaagt
gccagtgaagtggcagcattgtcgtcaccagcaagctctgctcatcctggaggtaagaca
gggatggaggaaaaccgcaggctggagcaccaaaagaagcaggagaaagcaaaccgaatt
gtagccgaggccattgccagggcccgggcccggggtgagcagaacatccctcgagtcctg
aacgaggatgaattgcccagtgtgcggccggaggaggagggcgaaaagaaacgcaggaag
aaaggcagtggagagaggctcaaggatgaaaagccaaagaagagcaaaacttctggtacc
tccaaaactaagggcaaaagtaagctcaacactattactcctgtggtgggtaagaagaga
aagcgtaatacctcatctgataattcagatgtggaagtcatgcctgcacagtcaccgcgg
gaggatgaagagagcagcattcagaagagacgctcaaatcggcaagtaaagcgaaaaaag
tatacagaggatctggatataaagatcacagatgatgaagaagaagaggaagtggatgta
actggtccgataaagccagagcctatcctccctgaaccaatacaggaaccagatggcgag
accttgccttccatgcagttctttgtggagaatcctagcgaagaggatgcggccattgtt
gacaaagtgctttctatgcgggttgtgaagaaggagcttccttcaggacagtacactgaa
gcagaagaattctttgtcaagtacaagaactactcctatctacactgtgaatgggctacg
atctcacaactagagaaagataagaggattcatcaaaaactaaagcgcttcaaaaccaaa
atggctcaaatgagacacttcttccatgaggatgaagagccattcaatccagactacgta
gaagtcgacaggatattggatgagtctcatagcattgacaaggacaatggggagcctgta
atttactacctagtgaaatggtgctctctgccctatgaggatagtacttgggaactcaaa
gaggatgttgatgagggcaagattcgagaatttaaacggatccaatcaaggcacccagaa
ctcaaaagggtgaatcggccacaggcaagttcctggaagaagttggagctgtcacatgaa
tataaaaacagaaaccagttaagggagtatcagttggaaggggtcaactggctgcttttt
aattggtataacaggcagaactgcatcctggctgatgaaatgggattgggcaaaactatt
caatccattgccttcttacaggaggtctataacgtgggcatccatggcccctttctggtc
attgccccactgtccaccattactaactgggagcgggaattcaatacgtggacagagatg
aacactattgtgtaccatggcagtctggccagccggcagatgattcagcagtatgagatg
tactgcaaagattcacgggggcgcctcattcctggggcatacaaatttgatgccttgatc
accacttttgagatgatattgtcagactgccctgagcttcgtgaaattgagtggcggtgc
gtcatcattgatgaggcccatcgacttaagaaccgtaactgcaagctgcttgatagtctc
aagcacatggacctggaacataaagtgctactcacaggaactccgctacaaaatactgtg
gaggaactgttcagcttgcttcatttcctggaaccttcacagtttccttcagaatcggag
ttcctcaaggactttggagatctcaagaccgaagagcaggttcaacagctacaggctatt
ctcaagccaatgatgctgagaagactcaaagaagatgtcgagaaaaacctagcacccaaa
caggaaactattattgaagtagagctgacaaacatccagaagaaatactaccgggctatt
ttagagaagaatttctctttcctttccaaaggagcaggtcacaccaatatgcctaatctg
ctcaacacaatgatggagttgcgaaaatgctgcaaccatccatatctcatcaatggtgcc
gaagaaaaaatcctcacagaatttcgggaagcttgccatattatacctcacgacttccac
ctgcaggccatggttcgttcagctggcaaactggttctgattgacaaattactgcccaag
ctcagagcaggcggccataaggttctgatcttctcccagatggtgcgctgcctagatatc
ttagaggattatctaatccagaggaggtacttttatgagcggattgatgggcgagttaga
ggcaatcttcgacaggctgctattgaccgctttagcaagcctgactcagaccgctttgtc
ttcttgctgtgcacccgggctggtgggcttggtattaatctcacagctgctgatacatgt
atcatctttgattcagattggaatcctcaaaatgacctacaggctcaggcacggtgtcat
cgaattgggcaaagcaaagctgtgaaagtatatcgtctcataactcgtaattcttatgag
agagagatgtttgataaggctagcctcaagttgggattggataaggctgtgctacagtct
atgagtggtcgagatggcaacatcactggaatccaacagttctctaagaaggagattgag
gatttattaagaaaaggtgcatatgcagccatcatggaagaagatgatgaaggctctaag
ttttgtgaagaggacattgaccagatcttgttgagacgaactacaaccatcaccattgag
tctgaaggaaaaggttctacctttgctaaggccagctttgttgcttctgaaaataggaca
gatatttctttggatgaccccaacttttggcaaaagtgggctaaaaaggctgacctagac
atggatctactcaatagcaagaataacctagtgattgacacaccgagagtacgaaaacag
acgcgtcacttcagtactctgaaagatgacgatcttgtggaattctccgatttggaaagt
gaggatgatgaacgaccgcgctcccgtcgacatgaccgccatcatgcttacgggcgcaca
gactgctttcgggtggaaaagcacctcctggtatacggctggggacggtggcgagatatc
ttgtctcatggacgcttcaagcgacgtatgacagagcgagacgtggagacaatttgccga
gctattcttgtgtactgtcttctacactatcgtggggatgaaaatatcaaaggttttatt
tgggacttgattagccctgctgaaaatggcaagacaaaagaattgcagaatcattcaggt
ctctctatccctgtgccccgtggacgcaagggtaaaaaagtaaagtcacagagcactttt
gatatccataaggcagattggatccgaaaatataatcctgacactctgttccaagatgag
agttataagaagcacttgaaacaccagtgtaataaggtgctattgcgagtacgaatgctt
tactacttaagacaggaggttattggagaccaagcagagaaggtgttagggggtaccatt
gccagtgagattgacatatggttcccagtagtggatcagttggaggttccaaccacatgg
tgggatagtgaggcggataaatccttgctcattggagtttttaagcatggctatgagaaa
tataatactatgagggcagacccagccttgtgcttcctggaaaaggctggccgaccagat
gacaaggccattgcagcagagcatcgagtgttggataatttctctgaccttgtagaaggg
gtcgactttgataaggattgtgaagatcctgaatataagcccctgcagggtcccccgaag
gaccaagatgatgagggtgatcccttgatgatgatggatgaggagatctcagtgattgat
gccgaagaagcccaggtgacccaacaaccaggccatttattctggcctccaggctctgcc
ctgactgctaggctccggcgactcgtaacagcctatcagcgcagttataagagagaacaa
atgaagatagaagctgcagaacgtggggaccggcggcggcgacgctgtgaggcagccttt
aagctaaaagaaatcgcacgtcgggaaaaacagcaacgatggacaaggcgtgaacaaact
gatttctatagagttgtgtctacctttggtgtggaatatgaccctgacaccatgcagttt
cattgggatcgtttccgcacttttgctcgactggataaaaaaacagatgaaagccttacc
aagtacttccatggttttgtggccatgtgccgccaggtgtgccgtcttcccccagcagct
ggtgatgaacccccagatcctaatctgtttattgagcccatcactgaagagagagcctca
cggactctctaccgtattgaattgcttcggcggttacgggaacaggttttgtgtcatcct
cttttggaagacaggctgtctttatgtcagcctccaggtcctgaattgcccaaatggtgg
gagcctattcgacatgatggggagcttctacaaggcgcagcccgccatggggtgagccaa
acagactgcaacatcatgcaggacccagacttctcttttctggctgcccgtatgagttat
atgcagaaccagcaggcaggagcacctgctccatccctgtcacgctgctctactccactg
ctgcagcagcaatatacctcgcgcactgcctcaccactgcccctgcgccaagatgctctt
gttgaaaagctacctgaggaaacagctgcccaggtccccagtctggagagtctgacctta
aagctagagcacgaggtggtggccaggagccagccaaccccacaagactatgagatgcga
gtaacctcctctgatactacacctctggtctcccggagtgttcctccagtcaaactggaa
gacgaggatgattcagactctgagctggacttgagcaagctgtcaccatcatcctcttct
tcctcatcctcatccagctccagctccagcactgatgagagtgaggacgagaaagaagca
aagctaactgctgaccggccccgcacaaagctctatgatgaagagagtctcttgtccctc
actatgtcccaagatggattcccaaatgaagacggagagcaaatgactccagagcttctg
ttgcttcaggaaagacaacgagcctctgagtggcccaaggatcgtgtcctgataaaccgc
attgaccttgtctgccaggctgtactctcagggaagtggccttccagtcgtcggagccag
gaaatggcaactggaggaatcttggggccaaccaaccacttgctagacagtccctcagtg
accccaggagaatatggggactctccagtccccacaccacgaagtagcagtgcagcttcc
atggcagaggaggaagcgtctgcagttagcacagcagcagcccagttcaccaaacttcgc
cgaggcatggatgagaaggagtttaccgtgcagatcaaagacgaggaagggttgaagcta
acattccagaagcacaagttaatggctaatggcgtaatgggagatggacatccactattt
cataagaagaagggaagcagaaagaagctagtggagctggaggtggagtgcatggaagag
cctaatcaccttgctgtggacctggagactcggatccctgtcatcaataaggtggatggt
actttgctggtgggtgaggatgcccctcgccgggctgaactggagatgtggttacagggt
catccagagtttgctgtcgatccccgatttctagcgtacatggaggatcgcagaaaacag
aaatggcagagatgtaaaaaaaataataaggcagagttgaactgtttgggaatggaacca
gtacagagaactaactctaggaatggaaaaaagggtcaccacgctgaaactgttttcaac
cgggttttgcctgggcctattgcaccagagagcagtaagaaaagggcccgcaggatgcga
ccagacctttcgaagatgatggccctcatgcaaggtggaggcactgggtccctatctctg
cataacaccttccagcacagcagtagtggcctgcagtcggtgtcatctctgggtcacagc
agtgctacttctgcatctttgccttttatgccgtttgtgatgggtggtgcagcatcatcc
cctcatgtagactctagcaccatgcttcatcaccctcaccaccatcaccatccaagcctg
agagccactggctacccttcttcaccagctactaccacctctggcgctgccttgcggttg
ccaccactgcaacctgaggacgatgatgacgatgaggaagatgatgatttatctcagggc
tacgatagctcagaaagggacttctcactcattgatgatcctatgatgccagccaactca
gactccagtgatgatgctgatgactga
DBGET
integrated database retrieval system
