KEGG   Echinops telfairi (small Madagascar hedgehog): 101656406
Entry
101656406         CDS       T08707                                 
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
  KO
K14327  regulator of nonsense transcripts 2
Organism
etf  Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03013  Nucleocytoplasmic transport
etf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:etf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101656406 (UPF2)
   03015 mRNA surveillance pathway
    101656406 (UPF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:etf03019]
    101656406 (UPF2)
Messenger RNA biogenesis [BR:etf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     101656406 (UPF2)
   mRNA cycle factors
    P-body specific factors
     101656406 (UPF2)
SSDB
Motif
Pfam: MIF4G Upf2
Other DBs
NCBI-GeneID: 101656406
NCBI-ProteinID: XP_004712688
LinkDB
Position
Unknown
AA seq 1230 aa
MPAERKKPANMEEKESLLNNKEKDCSERRPVSSREKPKDDIKLPAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEERKKQEEQAKRQQEEAAAQL
KEKEESLQLHQEVWERHQLRKELRSRNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYSDFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKGAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKDSNKDDSKEAKDCKDNKEVSSSDDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPLAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESVRQVHDLEQEFLIKLGKQLITEGSD
NDDDEGEEEEEENTDYLTDSNKENETDEENNEVMIKGGGLKHVPCVEDEDFIQALDKMML
ENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQ
FKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPA
NTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq 3693 nt   +upstreamnt  +downstreamnt
atgccagctgagcgtaaaaagccagcaaatatggaagaaaaagaatctttactgaacaac
aaggaaaaagactgcagtgaaaggcggccagtgagcagcagagagaaaccaaaagatgat
atcaagcttcctgccaagaaggaggttattaaggtcccagaagataaaaagaagaaactg
gaagaagataaaaggaaaaaagaagacaaagagcgtaagaaaaaagaagaggagaaggtg
aaggcagaagaggaattaaagaagaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagaggaagaagcaagaagagcaggcaaagcgtcagcaagaagaagcagctgctcagttg
aaagagaaagaggaatctcttcagcttcatcaggaagtttgggagcgacaccaattaagg
aaggaacttcgtagcagaaatcaaaatgctccagacaacagaccagaggaaaatttcttt
agccgactagactcaagtttgaagaagaatactgcttttgtcaagaaactaaaaacgatt
acagagcagcagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaagctgtagcttctattgtggaggcaaagctaaaaatatctgatgtgaattgt
gctgtgcacttatgctctctctttcaccagcgctactctgactttgccccatcacttctt
caggtctggaaaaagcattttgaagcaaggaaagaagaaaagacacctaacattaccaag
ctgagaacggacttgcgtttcattgcggaattgacaatagttgggattttcacagacaag
gaaggtctttccttaatctatgaacagctaaaaaatattattaatgctgatcgagaatcc
catactcatgtttctgtggtgataagtttttgtcgacattgtggagatgatattgctgga
cttgtaccaaggaaagtaaagggtgctgccgagaagtttaatttgagttttcctcctagt
gagataattagtccagagaaacagcagcctttccagaaccttttaaaagagtactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacagaacactgagagacaaaac
aggcgtattctacattctaaaggggagctaagtgaagatagacataaacaatatgaagaa
tttgctatgtcttatcagaagctgctggcaaattctcagtccttagcagaccttttggat
gaaaatatgccagatcttcctcaagataaaccaacacctgaagagcatgggcctggaatt
gatatattcacacctggtaagcctggagaatatgacttggaaggtggcatttgggaagat
gaagatgctcggaatttttatgagaacctcattgatttgaaagcttttgttccagccatc
ttgtttaaagataatgaaaaaagttgtcagaataaagactccaacaaagatgattctaaa
gaagctaaagattgtaaggataataaggaagtatcaagttctgatgatttagaacttgag
ctggagaatctagaaattaatgatgacaccttggagttagagggtggtgatgaagctgaa
gatcttacaaagaaacttcttgatgaacaggaacaagaggatgaagaagccagcactgga
tctcatctcaagcttatagtagatgcttttctgcagcagttgcccaactgtgtcaatcgc
gatctaatagacaaggcagcaatggatttttgcatgaacatgaacacaaaagctaatagg
aaaaagttggtacgagcgctcttcatagttcctagacaaaggttggatttgctaccattt
tatgcaagattggttgctacattacatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acaaagaacaaaactgttcggtttattggcgaactaactaagtttaagatgttcacaaaa
aatgataccttacactgtttaaagatgcttttatcagacttttcccatcaccatatcgaa
atggcatgcaccctccttgaaacatgtggaaggtttcttttcagatctcccgaatctcac
ctgaggaccagtgtacttttggaacaaatgatgaggaaaaaacaagcaatgcatcttgat
gcaagatatgtcacaatggtggagaatgcctattactattgcaacccacctctggctgag
aaaaccgtgaaaaagaaacgtcctcctctgcaggaatatgttcggaagcttttatacaag
gatctctctaaggttactactgagaaggttttgaggcagatgcgcaagttgccctggcag
gaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaatat
aatagtattcattgtgtagccaacctcttagcaggactagtactctaccaagaggatgtt
ggaattcatgtagtggacggtgttttagaagatattcgattaggaatggaggttaatcag
cctaaattcaaccagagacggatcagcagtgccaagttcttaggggagctttataattac
agaatggttgaatcggctgttatttttagaactctttattcttttacgtcatttggtgtt
aaccctgatggttctccaagttcattggatccacctgaacatctcttcagaattagacta
gtatgcactattttggatacctgcggccagtactttgatagaggttccagtaaacgaaaa
ctcgattgcttccttgtatattttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacgaaagaccatccgtttcctatcgacatagattacatgatcagcgatacactagaa
ctgctaagaccgaagatcaaactttgtaattctctggaagaatccgtcagacaggtgcac
gacctggaacaagaattcttaataaaactaggtaagcagttaattacagagggttctgat
aatgatgatgatgaaggtgaagaagaagaggaagagaatacagattatcttacagattcc
aataaggagaatgaaactgatgaagaaaataatgaggtaatgattaaaggtgggggactt
aagcatgttccttgtgtagaagatgaggacttcattcaagctctggataaaatgatgcta
gaaaatcttcagcaacgaagtggcgaatctgttaaagtacaccagctggatgttgctatt
cctttgcatctcaaaagccaactgaggaaagggccaccacttggtggtggggaaggcgaa
gcagagtctgcagacacgatgccatttgtcatgctaacaagaaaaggaaataaacagcag
tttaagatccttaatgtacccatgtcttctcaacttgctgcaaatcattggaaccagcaa
caggcagaacaagaagaaaggatgagaatgaaaaagctcacactagatatcaatgaacgg
caagaacaagaagattatcaagaaatgctgcagtccctagcacagcgcccagctccagca
aacaccaatcgcgagcgaaggcctcgctaccaacatccaaagggagcacctaatgcagat
ctaatctttaagactggtgggaggagacgttga

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