Echinops telfairi (small Madagascar hedgehog): 101656646
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Entry
101656646 CDS
T08707
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101656646 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101656646 (CPSF2)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101656646 (CPSF2)
U7-dependent histone pre-mRNA processing factors
101656646 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
SMC_N
Motif
Other DBs
NCBI-GeneID:
101656646
NCBI-ProteinID:
XP_004698821
UniProt:
A0ABM0IFF6
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSLDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLYTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLTDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQADIDSSDES
DVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPE
DFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISMTESIEIKARVTYIDYEGR
SDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDATSET
HIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQ
VDATSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPRLSD
FKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattatcaaattaactaccctctctggggtccaagaagagtctgctctttgc
tatcttctgcaagttgatgaatttaggtttttattggactgtggctgggatgagcacttt
tctctggatattatagattccctgaggaagcatgttcaccagattgatgctgtcctgttg
tcccaccccgaccccctccacctcggggcgctcccgtacgctgttgggaaactaggtctg
aactgtgctatctacgccaccatccccgtgtacaaaatggggcagatgttcatgtatgat
ctctatcagtctcgacacaatacagaagatttcacactctacaccttagatgacgttgac
gctgcctttgataaaatacagcagctgaaattctctcagattgtgaacttgaaaggcaaa
ggacatggcttatctatcacacctctgccagctggccatatgattggtggaaccatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcggttgacttcaaccacaagagg
gagatccacttaaatggatgttccttggaaatgctaagcagaccctctctacttatcaca
gattcatttaatgctacttacgtgcagcccaggcgaaaacagagagacgagcaacttctg
accaacgtcctggagacccttcgaggcgatggaaatgtattaatagcagtggacactgcg
ggccgagttttggaacttgctcaactgcttgatcaaatttggagaactaaagatgcagga
ctgggtgtctactcactggcgctcctcaacaatgtcagttacaatgtggtggagttttca
aagtcccaggtagaatggatgagtgacaagttgatgagatgttttgaagacaaaagaaat
aacccattccagtttcgccacctctccttatgccatggcctcactgacctggctcgagta
ccgagccccaaagttgtcctggccagccaacctgacctggaatgtggattttcaagggac
ctctttattcagtggtgtcaagaccctaaaaactcaatcattctaacatacagaactact
cctgggactttagcccgtttcttgattgataacccttctgaaaaaattacagagatagag
ttgcggaaacgtgtgaaacttgaagggaaggaactggaggaatacttggaaaaagagaag
ctgaagaaagaggcggctaagaaacttgagcaggcagatatagattccagcgatgagagt
gatgttgaagaagatatcgatcagccttcggctcataagactaagcatgatctgatgatg
aagggcgaaggtagtcgtaaaggaagtttctttaaacaggcgaaaaagtcctatcctatg
tttcctgctccagaagaaagaatcaaatgggacgagtatggggagattatcaaaccagag
gacttcttagtgccagaacttcaagctaccgaagaagaaaaaagcaaattagaatctggc
ttgacaaatggagatgagcccatggatcaggatttatccgatgttcctactaagtgtatt
tccatgacggagtccattgaaataaaagccagggttacttacatagactatgaaggccgc
tccgatggggattccatcaaaaaaatcattaatcagatgaaacctcgccagctgattatc
gtccatggccccccagaggccagtcaggacctcgcggagtgctgccgtgcctttggtggg
aaggacattaaagtgtacatgcccaagctgcacgagacagtggacgccacgagtgaaacg
cacatctaccaggtgcgactgaaagactcactggtcagctcccttcagttttgtaaggcc
aaagatgccgagctagcttggattgatggtgtcctggacatgagagtctccaaagtggac
acaggggttattttagaagaaggcgaactgaaggatgatggcgaagattcagaaatgcaa
gtggacgcgacttcagactctagcgtaatagcacagcaaaaggccatgaaaagtctgttt
ggggacgacgagaaagagaccggtgaagaaagcgagatcattcccacgctggagcccttg
ccgcctcacgaggttcctggacatcagtcggtgtttatgaatgaaccgaggctctcggac
ttcaagcaagttcttttacgagaggggattcaagctgaatttgttggtggggtcctggtg
tgcaacaatcaagtggcagtccgcaggacggaaacgggacgcattggattagaaggctgc
ctttgtcaagatttttataggataagagaccttttgtatgaacagtatgccattgtataa
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